| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is wecC [H]
Identifier: 108757761
GI number: 108757761
Start: 3139093
End: 3140412
Strand: Direct
Name: wecC [H]
Synonym: MXAN_2689
Alternate gene names: 108757761
Gene position: 3139093-3140412 (Clockwise)
Preceding gene: 108762209
Following gene: 108764072
Centisome position: 34.35
GC content: 63.33
Gene sequence:
>1320_bases ATGGTGAGCAGCCCGCTTCTGGATCGCATCAAGAAGCGGGACGCGAGGGTGGGTGTGGTCGGGCTTGGCTATGTCGGTCT TCCGCTAGGGATGGCGTTCGCGGAGGCGGGCTTCCCCGTCATGGGGCTCGACGTCGACAAGCGGAAGATCGACAAAATCG AGAAGGGGGAGAGCTACATCAAGCACATCCCCGGCGCTCCGCTGGCGGAGCTGAGCAAGTCGGGCAAGCTGAAGGCCACC ACGGACTTCGCCAAGGCGAAGGATATGGACTGCGTCATCATCTGCGTGCCCACGCCGCTCACGGCGTCGCGTGAGCCGGA CATGAGCTACATCATCCAGACGGGTGAGGCGCTCGCGCCGCACGTGCGTCCTGGACAGCTCTTCATCCTGGAGTCCACCA CGTACCCGGGGACGACAGAGGAGGTGCTCAAACCGCTGCTGGAGAAGAACGGCCTCAAGGCCGGCAAGGACTTCTACCTG GCCTTCAGCCCCGAGCGCGAGGACCCGGGCAACAAGAGCTTCAACACCAAGACGATTCCGAAGATTGTCGGTGGCTACTC ACCCGAATGCTCCGAGATGGCCGCGGCCCTCTACGGCAGCGCGCTGAAGGAAGTGGTGCCGGTGTCCTCCACCCGCGTGG CGGAGCTGACCAAGCTGCTGGAGAACATCTTCCGCTGCGTCAACATCGCCATGGTCAACGAGATGAAGATGCTCTGCGAC CGCATGGGCGTGGACGTGTGGGAGGCCATCCAGGCCGCGAGCACCAAGCCCTTCGGCTACATGCCCTTCTACCCAGGCCC GGGCCTCGGTGGGCATTGCATCCCCATCGACCCGTTCTACCTGACGTGGAAGGCGCGCGAGTACGAGTTCCACACCAAGT TCATCGAGCTGGCCGGCGAGGTGAACTGGCAGATGCCGTACTACGTGGTGCAGCGCACGATGGAGGCGCTGAACAAGAAC AAGCAGACGCTCAACGGCGCGAAGGTCCTCTGCCTGGGGGCGGCGTACAAAAAGGACATCGACGACATGCGTGAGAGTCC ATCGCTGCGCGTCATGACGCTGCTGGCGGAGAAGGGCGCCGAGCTGTCGTACCACGACCCGTACGTCCCCGAGCTGCACA AGGGCCACGGCTTCAACTTGGAGATGAAGTCCGTGCCGCTGAAGCCGGAGACGCTGGGCCAGTACGACGCGGTCCTCATC CTCACGGACCACTCGGACATCGACTACGCCATGTTGGTGGACCGCGCGAAGGTCGTCGTCGACACGCGCAACGCCACCAA GGGTGTCAGCAAGGGTCGTGAGAAAGTGACGAAGGCCTGA
Upstream 100 bases:
>100_bases GCGTGGTTGAGGTGGGGGGTCGTTTTCCGCTGAGTGTCGGGTCGGGGCGTGACCGTCTTAACGGCACGTCGCATCAGGAG AGGTGAGGACGATGAGGGTG
Downstream 100 bases:
>100_bases CAGTCATTCGCCGCCCGCCCGGAAACCGACCCTCCGAGCGGGGGGCCCCTCGTTCACGGATTCCGCCTTCGCGGCATCCG TGAGCGTGGAGCTGCTCGTA
Product: lipopolysaccharide biosynthesis protein
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MVSSPLLDRIKKRDARVGVVGLGYVGLPLGMAFAEAGFPVMGLDVDKRKIDKIEKGESYIKHIPGAPLAELSKSGKLKAT TDFAKAKDMDCVIICVPTPLTASREPDMSYIIQTGEALAPHVRPGQLFILESTTYPGTTEEVLKPLLEKNGLKAGKDFYL AFSPEREDPGNKSFNTKTIPKIVGGYSPECSEMAAALYGSALKEVVPVSSTRVAELTKLLENIFRCVNIAMVNEMKMLCD RMGVDVWEAIQAASTKPFGYMPFYPGPGLGGHCIPIDPFYLTWKAREYEFHTKFIELAGEVNWQMPYYVVQRTMEALNKN KQTLNGAKVLCLGAAYKKDIDDMRESPSLRVMTLLAEKGAELSYHDPYVPELHKGHGFNLEMKSVPLKPETLGQYDAVLI LTDHSDIDYAMLVDRAKVVVDTRNATKGVSKGREKVTKA
Sequences:
>Translated_439_residues MVSSPLLDRIKKRDARVGVVGLGYVGLPLGMAFAEAGFPVMGLDVDKRKIDKIEKGESYIKHIPGAPLAELSKSGKLKAT TDFAKAKDMDCVIICVPTPLTASREPDMSYIIQTGEALAPHVRPGQLFILESTTYPGTTEEVLKPLLEKNGLKAGKDFYL AFSPEREDPGNKSFNTKTIPKIVGGYSPECSEMAAALYGSALKEVVPVSSTRVAELTKLLENIFRCVNIAMVNEMKMLCD RMGVDVWEAIQAASTKPFGYMPFYPGPGLGGHCIPIDPFYLTWKAREYEFHTKFIELAGEVNWQMPYYVVQRTMEALNKN KQTLNGAKVLCLGAAYKKDIDDMRESPSLRVMTLLAEKGAELSYHDPYVPELHKGHGFNLEMKSVPLKPETLGQYDAVLI LTDHSDIDYAMLVDRAKVVVDTRNATKGVSKGREKVTKA >Mature_439_residues MVSSPLLDRIKKRDARVGVVGLGYVGLPLGMAFAEAGFPVMGLDVDKRKIDKIEKGESYIKHIPGAPLAELSKSGKLKAT TDFAKAKDMDCVIICVPTPLTASREPDMSYIIQTGEALAPHVRPGQLFILESTTYPGTTEEVLKPLLEKNGLKAGKDFYL AFSPEREDPGNKSFNTKTIPKIVGGYSPECSEMAAALYGSALKEVVPVSSTRVAELTKLLENIFRCVNIAMVNEMKMLCD RMGVDVWEAIQAASTKPFGYMPFYPGPGLGGHCIPIDPFYLTWKAREYEFHTKFIELAGEVNWQMPYYVVQRTMEALNKN KQTLNGAKVLCLGAAYKKDIDDMRESPSLRVMTLLAEKGAELSYHDPYVPELHKGHGFNLEMKSVPLKPETLGQYDAVLI LTDHSDIDYAMLVDRAKVVVDTRNATKGVSKGREKVTKA
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=375, Percent_Identity=25.3333333333333, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI296040438, Length=279, Percent_Identity=25.8064516129032, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI296040443, Length=171, Percent_Identity=28.0701754385965, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI48994968, Length=407, Percent_Identity=34.1523341523341, Blast_Score=227, Evalue=1e-60, Organism=Escherichia coli, GI1788340, Length=367, Percent_Identity=23.9782016348774, Blast_Score=70, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17560350, Length=384, Percent_Identity=25, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI17136908, Length=377, Percent_Identity=25.7294429708223, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 48466; Mature: 48466
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS00720 RASGEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSPLLDRIKKRDARVGVVGLGYVGLPLGMAFAEAGFPVMGLDVDKRKIDKIEKGESYI CCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCHHH KHIPGAPLAELSKSGKLKATTDFAKAKDMDCVIICVPTPLTASREPDMSYIIQTGEALAP HHCCCCCHHHHHCCCCCEEECCHHHHCCCCEEEEEECCCCCCCCCCCHHHEEECCCHHCC HVRPGQLFILESTTYPGTTEEVLKPLLEKNGLKAGKDFYLAFSPEREDPGNKSFNTKTIP CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHH KIVGGYSPECSEMAAALYGSALKEVVPVSSTRVAELTKLLENIFRCVNIAMVNEMKMLCD HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMGVDVWEAIQAASTKPFGYMPFYPGPGLGGHCIPIDPFYLTWKAREYEFHTKFIELAGE HHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHHHHHCC VNWQMPYYVVQRTMEALNKNKQTLNGAKVLCLGAAYKKDIDDMRESPSLRVMTLLAEKGA CCCCCHHHHHHHHHHHHHCCCHHCCCCEEEEECCHHHHHHHHHHCCCCEEEEEEEHHCCC ELSYHDPYVPELHKGHGFNLEMKSVPLKPETLGQYDAVLILTDHSDIDYAMLVDRAKVVV CCCCCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCEEEEEECCCCCCHHHHCCCEEEEE DTRNATKGVSKGREKVTKA ECCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVSSPLLDRIKKRDARVGVVGLGYVGLPLGMAFAEAGFPVMGLDVDKRKIDKIEKGESYI CCCCHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCHHH KHIPGAPLAELSKSGKLKATTDFAKAKDMDCVIICVPTPLTASREPDMSYIIQTGEALAP HHCCCCCHHHHHCCCCCEEECCHHHHCCCCEEEEEECCCCCCCCCCCHHHEEECCCHHCC HVRPGQLFILESTTYPGTTEEVLKPLLEKNGLKAGKDFYLAFSPEREDPGNKSFNTKTIP CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHH KIVGGYSPECSEMAAALYGSALKEVVPVSSTRVAELTKLLENIFRCVNIAMVNEMKMLCD HHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMGVDVWEAIQAASTKPFGYMPFYPGPGLGGHCIPIDPFYLTWKAREYEFHTKFIELAGE HHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCHHHHHHHHHHHCC VNWQMPYYVVQRTMEALNKNKQTLNGAKVLCLGAAYKKDIDDMRESPSLRVMTLLAEKGA CCCCCHHHHHHHHHHHHHCCCHHCCCCEEEEECCHHHHHHHHHHCCCCEEEEEEEHHCCC ELSYHDPYVPELHKGHGFNLEMKSVPLKPETLGQYDAVLILTDHSDIDYAMLVDRAKVVV CCCCCCCCCCCCCCCCCCCEEECCCCCCCHHCCCCCEEEEEECCCCCCHHHHCCCEEEEE DTRNATKGVSKGREKVTKA ECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA