| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is tldD [C]
Identifier: 108764072
GI number: 108764072
Start: 3140492
End: 3142267
Strand: Direct
Name: tldD [C]
Synonym: MXAN_2690
Alternate gene names: 108764072
Gene position: 3140492-3142267 (Clockwise)
Preceding gene: 108757761
Following gene: 108759222
Centisome position: 34.36
GC content: 67.17
Gene sequence:
>1776_bases GTGAGCGTGGAGCTGCTCGTATCGTGGAAGGGATGGGCTAGTGTCGGGGCCGTGCAATCCCTCCTTCGAACCGTGTTTCC CCTGCTGGCACTCTCGGCGCTGCTGACGGCGGCGGCGCCCGTGCCGGATGCGCGCGTGAAGCTGCTCGAGGCGATGTCCG CTGAGCTGGCGCGCAATCACCAGCAGCTGAAGATGCAGAACCACGAACCCCCGTATTTCATGAGCTACCAGCTCAAGGAC TACGAGCAGCACGCGATCTCCGCGCGCTACGGGGCGCTGTTCATGGACGACGGCTACCGTGAGCGGAAGCTGTACGTCGA CGTGCGCGTCGGTGACTACGACTTCGACAGCTCGGTGGCGGAGGGGTTGGAGTTCAGCTTCTCGACCAAGGGCACCAGCT ATGTGTCACGCAAGGAAGGCCCGCTGGACGACTCGCCGTTGGCGCTGCGCACCTCGCTGTGGCTCATCACCGATGAGAAG TACAAGTCCGCGCTGTTCCAGTACCTGAAGAAGAAGGGCGAGGACGTCTACGCGGTGGAGGACCCGAAGCGTCCGCCGTC CTTCACGCGCGAGAAGCCGGTGAAGCACGTGGAACCGCCGGTGGAGGCTCCGTTCGACCGCGAGCGCTGGGTGAAGGTCG CCCGCGACGTGTCGGCGCGCTTCAACGCGCACCCGGAGCTGTTCGACTCGGAGGTGCGCGTCACCAAGGACAAGGTGACG CGGCTGTTCGTGTCCTCGGAAGGCAGCCGCATCATCACCGAGGAGACGCTGTACGGCCTGCATGTCTCCGCCGTCACCCG GGCGCCGGACGGGCAACTGCTGGACAACTCGCGCAACTTCTATGTGCCCGCCGAAGCGGAGCTGCCGGACGTGGCGCGCC TGAACAAGGCGGCGGATGACGTCATCCAGGAGCTGCTGGCCCTGCGCGCCGCGCCCGCCATCGACCCGTACACGGGGCCC GCCATCCTTGCGCCAGAAGCGGCCGGGGTGCTCTTCCACGAAGCGGTGGGGCACCGGCTGGAGGGAGACCGGCAGGAAGG TGACAACGAGGGCAAGACGTTCAAGGGCCAGGTGGGCAAGCAGGTGCTGCCGTCGTTCATCTCCATCCACGACGACCCGA CGCGGCGCGTGCTCCAGAACGAGCCGCTCAACGGCTACTACCTCTTCGACGAGGAGGGCGTGCGCGGCCAGCGGGTGACG CTGGTGGAGAAGGGCGTGCTGCGCAACTACCTTCAGGGGCGCCGACCGGTGGAGGGCTTCCTCCAGTCGAACGGCCACGG CCGCAGCCAGGGCAACCTGAAGCCGGTGGCGCGCATGGCGAACCTGATGGTGGAGAGCACGAACGGCGTGAGCGACGCGG AGTTGAAGAAGCGTCTGATTGCCGAGGCGAAGCGCCAGGGCAAGCCGTTTGGCCTCATCATCCGCGACATCACCGGGGGC AACACCAACACGTCCGGCTACGGTTACCAGGCCTTCAAGGGCGTGCCGCGCATGGTGTACCGGGTGGATGTGAAGACGGG GAAGGAGACGCTGGTGCGCGGCGTGGAAATCGTGGGCACGCCGCTGTCGGCGGTGAACCGCATCCTCGCCTCGGGGCAGA AGCCCGGCGTCTTCAACGGCTTCTGCGGCGCGGAGAGCGGCAACGTCCCGGTGTCCACCGTGGCGCCGGCCATGCTGCTG CAGGAGTTGGAGCTCCAGCGCACCATGGAGGGGAAGGACCGCCCGCCGATTCTCACCAGCCCGGCGGCGCTGGAGTCCCC GGCGGCGAAGCCGTAG
Upstream 100 bases:
>100_bases GAGAAAGTGACGAAGGCCTGACAGTCATTCGCCGCCCGCCCGGAAACCGACCCTCCGAGCGGGGGGCCCCTCGTTCACGG ATTCCGCCTTCGCGGCATCC
Downstream 100 bases:
>100_bases CCGCGCGCCTCCGTGCCCCAGCCGCGCCTTACTGAGGGGCAGGTGAGGGTGCGAGAGGCATGGGGTTCGCAGGCCGGGGG CGCGCCGGGTGGAGCTGCCT
Product: TldD/PmbA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MSVELLVSWKGWASVGAVQSLLRTVFPLLALSALLTAAAPVPDARVKLLEAMSAELARNHQQLKMQNHEPPYFMSYQLKD YEQHAISARYGALFMDDGYRERKLYVDVRVGDYDFDSSVAEGLEFSFSTKGTSYVSRKEGPLDDSPLALRTSLWLITDEK YKSALFQYLKKKGEDVYAVEDPKRPPSFTREKPVKHVEPPVEAPFDRERWVKVARDVSARFNAHPELFDSEVRVTKDKVT RLFVSSEGSRIITEETLYGLHVSAVTRAPDGQLLDNSRNFYVPAEAELPDVARLNKAADDVIQELLALRAAPAIDPYTGP AILAPEAAGVLFHEAVGHRLEGDRQEGDNEGKTFKGQVGKQVLPSFISIHDDPTRRVLQNEPLNGYYLFDEEGVRGQRVT LVEKGVLRNYLQGRRPVEGFLQSNGHGRSQGNLKPVARMANLMVESTNGVSDAELKKRLIAEAKRQGKPFGLIIRDITGG NTNTSGYGYQAFKGVPRMVYRVDVKTGKETLVRGVEIVGTPLSAVNRILASGQKPGVFNGFCGAESGNVPVSTVAPAMLL QELELQRTMEGKDRPPILTSPAALESPAAKP
Sequences:
>Translated_591_residues MSVELLVSWKGWASVGAVQSLLRTVFPLLALSALLTAAAPVPDARVKLLEAMSAELARNHQQLKMQNHEPPYFMSYQLKD YEQHAISARYGALFMDDGYRERKLYVDVRVGDYDFDSSVAEGLEFSFSTKGTSYVSRKEGPLDDSPLALRTSLWLITDEK YKSALFQYLKKKGEDVYAVEDPKRPPSFTREKPVKHVEPPVEAPFDRERWVKVARDVSARFNAHPELFDSEVRVTKDKVT RLFVSSEGSRIITEETLYGLHVSAVTRAPDGQLLDNSRNFYVPAEAELPDVARLNKAADDVIQELLALRAAPAIDPYTGP AILAPEAAGVLFHEAVGHRLEGDRQEGDNEGKTFKGQVGKQVLPSFISIHDDPTRRVLQNEPLNGYYLFDEEGVRGQRVT LVEKGVLRNYLQGRRPVEGFLQSNGHGRSQGNLKPVARMANLMVESTNGVSDAELKKRLIAEAKRQGKPFGLIIRDITGG NTNTSGYGYQAFKGVPRMVYRVDVKTGKETLVRGVEIVGTPLSAVNRILASGQKPGVFNGFCGAESGNVPVSTVAPAMLL QELELQRTMEGKDRPPILTSPAALESPAAKP >Mature_590_residues SVELLVSWKGWASVGAVQSLLRTVFPLLALSALLTAAAPVPDARVKLLEAMSAELARNHQQLKMQNHEPPYFMSYQLKDY EQHAISARYGALFMDDGYRERKLYVDVRVGDYDFDSSVAEGLEFSFSTKGTSYVSRKEGPLDDSPLALRTSLWLITDEKY KSALFQYLKKKGEDVYAVEDPKRPPSFTREKPVKHVEPPVEAPFDRERWVKVARDVSARFNAHPELFDSEVRVTKDKVTR LFVSSEGSRIITEETLYGLHVSAVTRAPDGQLLDNSRNFYVPAEAELPDVARLNKAADDVIQELLALRAAPAIDPYTGPA ILAPEAAGVLFHEAVGHRLEGDRQEGDNEGKTFKGQVGKQVLPSFISIHDDPTRRVLQNEPLNGYYLFDEEGVRGQRVTL VEKGVLRNYLQGRRPVEGFLQSNGHGRSQGNLKPVARMANLMVESTNGVSDAELKKRLIAEAKRQGKPFGLIIRDITGGN TNTSGYGYQAFKGVPRMVYRVDVKTGKETLVRGVEIVGTPLSAVNRILASGQKPGVFNGFCGAESGNVPVSTVAPAMLLQ ELELQRTMEGKDRPPILTSPAALESPAAKP
Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U62 family [H]
Homologues:
Organism=Escherichia coli, GI1789640, Length=298, Percent_Identity=27.5167785234899, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002510 [H]
Pfam domain/function: PF01523 PmbA_TldD [H]
EC number: NA
Molecular weight: Translated: 65293; Mature: 65162
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVELLVSWKGWASVGAVQSLLRTVFPLLALSALLTAAAPVPDARVKLLEAMSAELARNH CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCH QQLKMQNHEPPYFMSYQLKDYEQHAISARYGALFMDDGYRERKLYVDVRVGDYDFDSSVA HHHHHCCCCCCEEEEEECCCHHHHHHHHHHCEEEECCCCCCEEEEEEEEECCCCCCHHHH EGLEFSFSTKGTSYVSRKEGPLDDSPLALRTSLWLITDEKYKSALFQYLKKKGEDVYAVE HCCEEEECCCCCCHHHCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCEEEEEC DPKRPPSFTREKPVKHVEPPVEAPFDRERWVKVARDVSARFNAHPELFDSEVRVTKDKVT CCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHCCHHHHH RLFVSSEGSRIITEETLYGLHVSAVTRAPDGQLLDNSRNFYVPAEAELPDVARLNKAADD EEEEECCCCEEEEHHHHHEEEEEEEECCCCCCEECCCCCEEEECCCCCCHHHHHHHHHHH VIQELLALRAAPAIDPYTGPAILAPEAAGVLFHEAVGHRLEGDRQEGDNEGKTFKGQVGK HHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHH QVLPSFISIHDDPTRRVLQNEPLNGYYLFDEEGVRGQRVTLVEKGVLRNYLQGRRPVEGF HHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCCCEEHHHHHHHHHHHHCCCCCHHHH LQSNGHGRSQGNLKPVARMANLMVESTNGVSDAELKKRLIAEAKRQGKPFGLIIRDITGG HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCC NTNTSGYGYQAFKGVPRMVYRVDVKTGKETLVRGVEIVGTPLSAVNRILASGQKPGVFNG CCCCCCCCHHHHHCCCEEEEEEECCCCHHHHHHCHHHCCCCHHHHHHHHHCCCCCCCCCC FCGAESGNVPVSTVAPAMLLQELELQRTMEGKDRPPILTSPAALESPAAKP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCCCCCCCC >Mature Secondary Structure SVELLVSWKGWASVGAVQSLLRTVFPLLALSALLTAAAPVPDARVKLLEAMSAELARNH CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCH QQLKMQNHEPPYFMSYQLKDYEQHAISARYGALFMDDGYRERKLYVDVRVGDYDFDSSVA HHHHHCCCCCCEEEEEECCCHHHHHHHHHHCEEEECCCCCCEEEEEEEEECCCCCCHHHH EGLEFSFSTKGTSYVSRKEGPLDDSPLALRTSLWLITDEKYKSALFQYLKKKGEDVYAVE HCCEEEECCCCCCHHHCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCEEEEEC DPKRPPSFTREKPVKHVEPPVEAPFDRERWVKVARDVSARFNAHPELFDSEVRVTKDKVT CCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHCCHHHHH RLFVSSEGSRIITEETLYGLHVSAVTRAPDGQLLDNSRNFYVPAEAELPDVARLNKAADD EEEEECCCCEEEEHHHHHEEEEEEEECCCCCCEECCCCCEEEECCCCCCHHHHHHHHHHH VIQELLALRAAPAIDPYTGPAILAPEAAGVLFHEAVGHRLEGDRQEGDNEGKTFKGQVGK HHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHH QVLPSFISIHDDPTRRVLQNEPLNGYYLFDEEGVRGQRVTLVEKGVLRNYLQGRRPVEGF HHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCCCCCEEHHHHHHHHHHHHCCCCCHHHH LQSNGHGRSQGNLKPVARMANLMVESTNGVSDAELKKRLIAEAKRQGKPFGLIIRDITGG HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCC NTNTSGYGYQAFKGVPRMVYRVDVKTGKETLVRGVEIVGTPLSAVNRILASGQKPGVFNG CCCCCCCCHHHHHCCCEEEEEEECCCCHHHHHHCHHHCCCCHHHHHHHHHCCCCCCCCCC FCGAESGNVPVSTVAPAMLLQELELQRTMEGKDRPPILTSPAALESPAAKP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]