| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yheS [H]
Identifier: 108757726
GI number: 108757726
Start: 3882602
End: 3884575
Strand: Direct
Name: yheS [H]
Synonym: MXAN_3339
Alternate gene names: 108757726
Gene position: 3882602-3884575 (Clockwise)
Preceding gene: 108759295
Following gene: 108761379
Centisome position: 42.48
GC content: 68.24
Gene sequence:
>1974_bases ATGAGCCTCGTCATCGCCCAGGACCTCTGTCTCTCCTACGGAAAGAAGGTCCTCTTCGATCAGGACAGTTTCACACTGGG TCCCAGGGACCGGGTGGGCCTCGTAGGGGCCAACGGGACGGGTAAGAGCTCGCTGATGAAAATCCTGGCGGGCGTGTCCC AGGCCGACTCGGGGACGGTGCAATACAGCCGCAAGGCCCGAGCGGGCTACCTGCCGCAGGAAATCGCCGGGTTGCCGGAT GGCACCGTGGTGGAGGCGGTGATGAGCACCGTGCCCGGCCGCGATGCCATGGAGGCGCGCCTCAAGGAGACGGAGGCTGC GCTCGCCGCCGCCACGGACGAGGAGGACCAGCTGGAGCTGTCCCAGTCCCTGGCGGACCTGCATGCGGAGCTGGACGACT TCGAGAACCGCTACGGCCGCCACCACGCCGAGCGCATCCTCAAGGGTCTGGGCTTCCGCGACACGGACCTGGCCAAGCCC ACCTCCGCGCTGTCCGGCGGCTGGCGGATGCGCGCGGCCCTGGCGGGACTGCTGCTCCAGGACCCCGACCTGCTCCTGTT GGACGAGCCCACCAACCACCTGGACGTGCCCACGCTCACGTGGTTCGACGACTTCATGCGCCGCTCCAACAAGGCGCTGG TGCTCATCTCCCACGACAAGGACTTCCTCAACCGGCAGATCAACCGGGTGGTGTCCCTGGAAGTGGAGGGCGTGCGCGAG TACGCGGGGAACTACGACGAATACAAGCGCCTGCGCGCGGAGGAGAAGGAGCTGTTGAGGGCCCGCGCCGAGAAGGTGGA GTCGCGCCGCGCGGAGCTGCAGGGCTTCATCGACCGCTTCGGCGCCAAGGCCACCAAGGCGCGTCAGGCCCAGAGCCGCG CCAAGATGTTGGAGAAGCTGGAGAAGGTGCAGGTCCTGGAGGAGCGGACGTCGATGAAGTTCCGCTTCCCCGAGGTCGAG CGGAGCGGGCGCGACGTGGTGACGCTGGAGGGCATCACCAAACGGTACGGCGCGCAGACCATCTACGACGGCCTCACCGG GCGCGTGGAGCGTGGGCAGCGCATCGCCGTGGTGGGCGCGAACGGCGCGGGCAAGACGACACTCCTGAAGATGGTCGCTG GCGAGCTGGCGCCGGACACCGGGACGGTGACGCTGGGGCACAACGTGGTGGTGGGCTATTACGCGCAGCACCACGCGGAC AAGCTGAACCGGCAGAACACCATCATCGAAGAGGTGCGCCCGCTGGCCGCGGACAAGCCGGAGAGCTACGTGCGCGGCGT GCTGGGCGCGTTCCTCTTCAGCGGCGATGAGGTGGAGAAGCCCATTGGCGTGCTGAGTGGTGGTGAGCGCGCGCGGGTGG CGCTGGCCAAGCTGTTGCTGGTGCCGTCCAACTTCCTGCTGATGGACGAGCCCACCAACCACCTGGACCTGGACTCGGCC GAGATGCTGATTGAAGCGCTGAAGGGCTACGGCGGCACGTTGCTGTTCGTCAGCCACAGCCGGAGCTTCATCAACGGCCT GGCGTCGCACGTGTGGGAGGTCGCGGATGGGAAGCTCACGCCGCATCCGGGCAACCTGGACGACTACCTGTACCACCAGC AGAAGCTCCAGCAGGCGGCGGCGGAGGCCTCGGCCCTGGCGGCGGGCCAGGCGCGGGGTGAGAAGGTGGCCTCCGGGCCG ATGACGGAGAAGGACCGCAAGCGGCTGGAGGCGGAGGCGCGCCAGCGCCGCAGCGTGGTGGAGGGGCCCCTCAAGAAGGA AATTGCGAAGCTGGAGGCGCGCATCGCCGAGGTGGAGGCCGGACAGAAGGAGCGCGAGGCGCAGCTCGCGGACCCGGCCC TCTACAACGACTTCGCGCGCGCCAAGCCGCTGATGGACACGCACCGCGCGAGCAAGGAGGAGCTGGAAGACCTCTATGCC CGCTGGGAGGCTGCGCAGGAGAAGCTGGCCGAGGCGTCCGCGTCACTGGGATGA
Upstream 100 bases:
>100_bases CCCCGGCCCAACCCGGAAAGCCCCTGTAGGGCCCCAGAGCGAACGGGCGGGCACATCCGACATTCCCGAGGGGCTCGCGG GCTGTTACATCCCCGGCGCC
Downstream 100 bases:
>100_bases GGGCCGCGCGGCGCTCGCCCGGCTCATCGGGTGAGCATCCGGTGGAGCAGCCACATCAAGCCCTCGGAGGCGTACCCGGC CAGGTTGAAGGTCTGGCCTC
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MSLVIAQDLCLSYGKKVLFDQDSFTLGPRDRVGLVGANGTGKSSLMKILAGVSQADSGTVQYSRKARAGYLPQEIAGLPD GTVVEAVMSTVPGRDAMEARLKETEAALAAATDEEDQLELSQSLADLHAELDDFENRYGRHHAERILKGLGFRDTDLAKP TSALSGGWRMRAALAGLLLQDPDLLLLDEPTNHLDVPTLTWFDDFMRRSNKALVLISHDKDFLNRQINRVVSLEVEGVRE YAGNYDEYKRLRAEEKELLRARAEKVESRRAELQGFIDRFGAKATKARQAQSRAKMLEKLEKVQVLEERTSMKFRFPEVE RSGRDVVTLEGITKRYGAQTIYDGLTGRVERGQRIAVVGANGAGKTTLLKMVAGELAPDTGTVTLGHNVVVGYYAQHHAD KLNRQNTIIEEVRPLAADKPESYVRGVLGAFLFSGDEVEKPIGVLSGGERARVALAKLLLVPSNFLLMDEPTNHLDLDSA EMLIEALKGYGGTLLFVSHSRSFINGLASHVWEVADGKLTPHPGNLDDYLYHQQKLQQAAAEASALAAGQARGEKVASGP MTEKDRKRLEAEARQRRSVVEGPLKKEIAKLEARIAEVEAGQKEREAQLADPALYNDFARAKPLMDTHRASKEELEDLYA RWEAAQEKLAEASASLG
Sequences:
>Translated_657_residues MSLVIAQDLCLSYGKKVLFDQDSFTLGPRDRVGLVGANGTGKSSLMKILAGVSQADSGTVQYSRKARAGYLPQEIAGLPD GTVVEAVMSTVPGRDAMEARLKETEAALAAATDEEDQLELSQSLADLHAELDDFENRYGRHHAERILKGLGFRDTDLAKP TSALSGGWRMRAALAGLLLQDPDLLLLDEPTNHLDVPTLTWFDDFMRRSNKALVLISHDKDFLNRQINRVVSLEVEGVRE YAGNYDEYKRLRAEEKELLRARAEKVESRRAELQGFIDRFGAKATKARQAQSRAKMLEKLEKVQVLEERTSMKFRFPEVE RSGRDVVTLEGITKRYGAQTIYDGLTGRVERGQRIAVVGANGAGKTTLLKMVAGELAPDTGTVTLGHNVVVGYYAQHHAD KLNRQNTIIEEVRPLAADKPESYVRGVLGAFLFSGDEVEKPIGVLSGGERARVALAKLLLVPSNFLLMDEPTNHLDLDSA EMLIEALKGYGGTLLFVSHSRSFINGLASHVWEVADGKLTPHPGNLDDYLYHQQKLQQAAAEASALAAGQARGEKVASGP MTEKDRKRLEAEARQRRSVVEGPLKKEIAKLEARIAEVEAGQKEREAQLADPALYNDFARAKPLMDTHRASKEELEDLYA RWEAAQEKLAEASASLG >Mature_656_residues SLVIAQDLCLSYGKKVLFDQDSFTLGPRDRVGLVGANGTGKSSLMKILAGVSQADSGTVQYSRKARAGYLPQEIAGLPDG TVVEAVMSTVPGRDAMEARLKETEAALAAATDEEDQLELSQSLADLHAELDDFENRYGRHHAERILKGLGFRDTDLAKPT SALSGGWRMRAALAGLLLQDPDLLLLDEPTNHLDVPTLTWFDDFMRRSNKALVLISHDKDFLNRQINRVVSLEVEGVREY AGNYDEYKRLRAEEKELLRARAEKVESRRAELQGFIDRFGAKATKARQAQSRAKMLEKLEKVQVLEERTSMKFRFPEVER SGRDVVTLEGITKRYGAQTIYDGLTGRVERGQRIAVVGANGAGKTTLLKMVAGELAPDTGTVTLGHNVVVGYYAQHHADK LNRQNTIIEEVRPLAADKPESYVRGVLGAFLFSGDEVEKPIGVLSGGERARVALAKLLLVPSNFLLMDEPTNHLDLDSAE MLIEALKGYGGTLLFVSHSRSFINGLASHVWEVADGKLTPHPGNLDDYLYHQQKLQQAAAEASALAAGQARGEKVASGPM TEKDRKRLEAEARQRRSVVEGPLKKEIAKLEARIAEVEAGQKEREAQLADPALYNDFARAKPLMDTHRASKEELEDLYAR WEAAQEKLAEASASLG
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=33.3962264150943, Blast_Score=299, Evalue=5e-81, Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=32.7715355805243, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=33.1460674157303, Blast_Score=250, Evalue=3e-66, Organism=Homo sapiens, GI69354671, Length=543, Percent_Identity=29.6500920810313, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI10947135, Length=543, Percent_Identity=29.6500920810313, Blast_Score=215, Evalue=1e-55, Organism=Escherichia coli, GI1789751, Length=654, Percent_Identity=36.2385321100917, Blast_Score=391, Evalue=1e-110, Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=36.9114877589454, Blast_Score=354, Evalue=1e-98, Organism=Escherichia coli, GI1787182, Length=654, Percent_Identity=30.5810397553517, Blast_Score=273, Evalue=3e-74, Organism=Escherichia coli, GI2367384, Length=535, Percent_Identity=32.7102803738318, Blast_Score=255, Evalue=5e-69, Organism=Escherichia coli, GI1788165, Length=185, Percent_Identity=28.1081081081081, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788225, Length=223, Percent_Identity=26.457399103139, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1787164, Length=206, Percent_Identity=28.1553398058252, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786803, Length=217, Percent_Identity=30.4147465437788, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI48995001, Length=185, Percent_Identity=28.1081081081081, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI87081782, Length=200, Percent_Identity=29, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=33.2082551594747, Blast_Score=281, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17555318, Length=530, Percent_Identity=30.9433962264151, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=30.5709023941068, Blast_Score=244, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=32.0964749536178, Blast_Score=272, Evalue=1e-73, Organism=Saccharomyces cerevisiae, GI6320874, Length=548, Percent_Identity=33.7591240875912, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6323278, Length=392, Percent_Identity=28.5714285714286, Blast_Score=147, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6324314, Length=407, Percent_Identity=27.5184275184275, Blast_Score=147, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6325030, Length=409, Percent_Identity=26.4058679706601, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI24666836, Length=527, Percent_Identity=35.673624288425, Blast_Score=336, Evalue=4e-92, Organism=Drosophila melanogaster, GI24642252, Length=528, Percent_Identity=33.9015151515151, Blast_Score=271, Evalue=9e-73, Organism=Drosophila melanogaster, GI18859989, Length=528, Percent_Identity=33.9015151515151, Blast_Score=271, Evalue=9e-73, Organism=Drosophila melanogaster, GI24641342, Length=519, Percent_Identity=30.635838150289, Blast_Score=246, Evalue=5e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 72336; Mature: 72205
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVIAQDLCLSYGKKVLFDQDSFTLGPRDRVGLVGANGTGKSSLMKILAGVSQADSGTV CCEEHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE QYSRKARAGYLPQEIAGLPDGTVVEAVMSTVPGRDAMEARLKETEAALAAATDEEDQLEL EECHHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH SQSLADLHAELDDFENRYGRHHAERILKGLGFRDTDLAKPTSALSGGWRMRAALAGLLLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHC DPDLLLLDEPTNHLDVPTLTWFDDFMRRSNKALVLISHDKDFLNRQINRVVSLEVEGVRE CCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHEEEHHHHHH YAGNYDEYKRLRAEEKELLRARAEKVESRRAELQGFIDRFGAKATKARQAQSRAKMLEKL HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EKVQVLEERTSMKFRFPEVERSGRDVVTLEGITKRYGAQTIYDGLTGRVERGQRIAVVGA HHHHHHHHHHCCEEECCHHHCCCCCEEEECCHHHHHCCHHHHHHHCCHHCCCCEEEEEEC NGAGKTTLLKMVAGELAPDTGTVTLGHNVVVGYYAQHHADKLNRQNTIIEEVRPLAADKP CCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCH ESYVRGVLGAFLFSGDEVEKPIGVLSGGERARVALAKLLLVPSNFLLMDEPTNHLDLDSA HHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHH EMLIEALKGYGGTLLFVSHSRSFINGLASHVWEVADGKLTPHPGNLDDYLYHQQKLQQAA HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH AEASALAAGQARGEKVASGPMTEKDRKRLEAEARQRRSVVEGPLKKEIAKLEARIAEVEA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GQKEREAQLADPALYNDFARAKPLMDTHRASKEELEDLYARWEAAQEKLAEASASLG CCHHHHHHHCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLVIAQDLCLSYGKKVLFDQDSFTLGPRDRVGLVGANGTGKSSLMKILAGVSQADSGTV CEEHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE QYSRKARAGYLPQEIAGLPDGTVVEAVMSTVPGRDAMEARLKETEAALAAATDEEDQLEL EECHHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH SQSLADLHAELDDFENRYGRHHAERILKGLGFRDTDLAKPTSALSGGWRMRAALAGLLLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHC DPDLLLLDEPTNHLDVPTLTWFDDFMRRSNKALVLISHDKDFLNRQINRVVSLEVEGVRE CCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHEEEHHHHHH YAGNYDEYKRLRAEEKELLRARAEKVESRRAELQGFIDRFGAKATKARQAQSRAKMLEKL HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EKVQVLEERTSMKFRFPEVERSGRDVVTLEGITKRYGAQTIYDGLTGRVERGQRIAVVGA HHHHHHHHHHCCEEECCHHHCCCCCEEEECCHHHHHCCHHHHHHHCCHHCCCCEEEEEEC NGAGKTTLLKMVAGELAPDTGTVTLGHNVVVGYYAQHHADKLNRQNTIIEEVRPLAADKP CCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCH ESYVRGVLGAFLFSGDEVEKPIGVLSGGERARVALAKLLLVPSNFLLMDEPTNHLDLDSA HHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHH EMLIEALKGYGGTLLFVSHSRSFINGLASHVWEVADGKLTPHPGNLDDYLYHQQKLQQAA HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH AEASALAAGQARGEKVASGPMTEKDRKRLEAEARQRRSVVEGPLKKEIAKLEARIAEVEA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GQKEREAQLADPALYNDFARAKPLMDTHRASKEELEDLYARWEAAQEKLAEASASLG CCHHHHHHHCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]