Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108757642

Identifier: 108757642

GI number: 108757642

Start: 6173644

End: 6174843

Strand: Reverse

Name: 108757642

Synonym: MXAN_4937

Alternate gene names: NA

Gene position: 6174843-6173644 (Counterclockwise)

Preceding gene: 108762426

Following gene: 108760640

Centisome position: 67.56

GC content: 62.67

Gene sequence:

>1200_bases
ATGCTGTCCAATGGCACACGCGTTCTGGATTCGAAATGCGTGCCTTTAAAGCTGAAAATGGAATTCATGCGTTCATTGTT
GTGGCGGTTATCCGGCGTGACAGTCCTCACGTCGGACCGCCATCCCCAAGTCGAAGCGGATTGGAGCAAGACAATGAAGG
TCAGTCGAGTGGCCCCCATGTGGCGAATGCTGAGTGCGGCCCTGGCGTTCGGCATGATGAGCGCGTGCGGTTCTGAGTTG
GAGGACGAATCCGTCGTTTCCGAAGAGGCGCCGGTGGGCGGCGAGTCGTCATCGGACTCGGCGTCGGCGATGGCCGGTGA
CCGTTATGCCAACGCAGTCGTCCAAAGCGGTGTCATTGCCGTCCTCAATCCGAACAACGCCGTGGGCGCACCGGATGGGA
ACGCCGCGACGTTCCTGGGGCTCCTGGGCGGCTCGATGGTCCTGGACATGGGCCTGGGCGAAGAGGGCACAGGGCCGCTG
CGCGTCTACTACCAGGGCCTTTCGCTGGCGGTCATCGCCCAGGTGGAATTCCTTCGTGGGGACATGAGCATCATCAGCAC
GGGACAGGCGAACCTGCTGGACCTGGGGCTCGGGACTCACTCCACGCTGGTGCCATTCAGCAGCTCCACGCCGTATCGCT
ATGTGAGGCTGCGCGGTGGGGTTGCCTCGTTGTACGGCTTGGACGCGGTGGAGGATACGGGCGGTGGTGCGAGCGCTGTG
TGTGGCGATGGCCGTATCAACAATGGGGAGCAGTGTGACGACGGCAACCGGGTTTCGTCGGATGGCTGTAGCAGCACCTG
CCGGGTGGAGCCCGGGTACACCTGCAATGGCATGCAGCCCAGTGTCTGCACGGACGTCAATGAATGCACGAATGGCACTG
CGCAGTGTTCGGTGAATGCGATTTGCACGAACACGCCGGGAAGTTACACCTGCACCTGCAGACCGGGCTACTGGGGAAAT
GGTTGGACGTGCAGTGACATCGACGAGTGCTCGAACGGGACTGCCGCGTGCAATCCCAGCCAGGTGTGTGTCAACACGCC
GGGTGGCTATGAGTGCGTGGGTGGCTCCTGTCCGGCTCCCCGGGTGCAGTGTGGCGCGCAGTGCGTGGATGTGTCGTCGG
ACGTGAACAACTGCGGCGCCTGCGGCGTTGTCTGTCCGGCGGCGAAGACCTGCTCGTCGGGCGTCTGTGTCATGAGGTAG

Upstream 100 bases:

>100_bases
CCGAGAATCGAGAAGGCTGCCTCGTGCTGGGCCAGGAGTCTCAGCCTTCGTGTCCAGGGTGGGTGTTGCCTTACGGTCGA
CGCGGTGATGCCAGGAGAAA

Downstream 100 bases:

>100_bases
CCGGGACCGACGCTGTCGCTCGCGGAATGACATCATGAGCTGGCAGGCTCACCGCCCTCGCGGCGCAACACGGCGCCGCG
AGGGTCGGGGTTCTCCTGGC

Product: EGF domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPMWRMLSAALAFGMMSACGSEL
EDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIAVLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPL
RVYYQGLSLAVIAQVEFLRGDMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV
CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNAICTNTPGSYTCTCRPGYWGN
GWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAPRVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR

Sequences:

>Translated_399_residues
MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPMWRMLSAALAFGMMSACGSEL
EDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIAVLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPL
RVYYQGLSLAVIAQVEFLRGDMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV
CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNAICTNTPGSYTCTCRPGYWGN
GWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAPRVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR
>Mature_399_residues
MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPMWRMLSAALAFGMMSACGSEL
EDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIAVLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPL
RVYYQGLSLAVIAQVEFLRGDMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV
CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNAICTNTPGSYTCTCRPGYWGN
GWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAPRVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI66346695, Length=89, Percent_Identity=49.438202247191, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI23397689, Length=97, Percent_Identity=44.3298969072165, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI23397681, Length=97, Percent_Identity=44.3298969072165, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI17978491, Length=97, Percent_Identity=45.360824742268, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI281485550, Length=89, Percent_Identity=49.438202247191, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI120587029, Length=103, Percent_Identity=43.6893203883495, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI223029476, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI223029470, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI223029472, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI5453766, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI223029474, Length=152, Percent_Identity=36.1842105263158, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI56237021, Length=89, Percent_Identity=43.8202247191011, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI118572606, Length=131, Percent_Identity=38.1679389312977, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI283046663, Length=104, Percent_Identity=42.3076923076923, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI40807489, Length=160, Percent_Identity=31.875, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI283046665, Length=104, Percent_Identity=42.3076923076923, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI166362728, Length=98, Percent_Identity=39.7959183673469, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI296011015, Length=98, Percent_Identity=39.7959183673469, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI31377568, Length=70, Percent_Identity=50, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI23397683, Length=127, Percent_Identity=36.2204724409449, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI51873053, Length=147, Percent_Identity=34.6938775510204, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI259013547, Length=147, Percent_Identity=34.6938775510204, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI23397691, Length=127, Percent_Identity=36.2204724409449, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI51873055, Length=147, Percent_Identity=34.6938775510204, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI68508955, Length=99, Percent_Identity=39.3939393939394, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI86788132, Length=72, Percent_Identity=45.8333333333333, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI86788015, Length=72, Percent_Identity=45.8333333333333, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI9665262, Length=72, Percent_Identity=45.8333333333333, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI189491645, Length=134, Percent_Identity=35.0746268656716, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI144953895, Length=199, Percent_Identity=29.6482412060301, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI189491647, Length=98, Percent_Identity=41.8367346938776, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI239749684, Length=91, Percent_Identity=41.7582417582418, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI169177000, Length=91, Percent_Identity=41.7582417582418, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI59850812, Length=112, Percent_Identity=37.5, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI56550049, Length=112, Percent_Identity=37.5, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI169178458, Length=91, Percent_Identity=41.7582417582418, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI110347412, Length=186, Percent_Identity=33.8709677419355, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI110347431, Length=186, Percent_Identity=33.8709677419355, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI110347437, Length=186, Percent_Identity=33.8709677419355, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI19743803, Length=71, Percent_Identity=46.4788732394366, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI34734066, Length=123, Percent_Identity=37.3983739837398, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI34734062, Length=123, Percent_Identity=37.3983739837398, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI222352166, Length=105, Percent_Identity=31.4285714285714, Blast_Score=65, Evalue=9e-11,
Organism=Homo sapiens, GI17978489, Length=104, Percent_Identity=38.4615384615385, Blast_Score=65, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71989803, Length=90, Percent_Identity=42.2222222222222, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI212646669, Length=127, Percent_Identity=34.6456692913386, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71989816, Length=90, Percent_Identity=42.2222222222222, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71989812, Length=90, Percent_Identity=42.2222222222222, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17557081, Length=125, Percent_Identity=35.2, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17551862, Length=115, Percent_Identity=40, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI221329796, Length=133, Percent_Identity=37.593984962406, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI221472639, Length=173, Percent_Identity=36.9942196531792, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221331100, Length=115, Percent_Identity=40.8695652173913, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41207; Mature: 41207

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00010 ASX_HYDROXYL ; PS01186 EGF_2 ; PS50026 EGF_3 ; PS01187 EGF_CA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPM
CCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
WRMLSAALAFGMMSACGSELEDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIA
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHCCEEE
VLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPLRVYYQGLSLAVIAQVEFLRG
EECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEEEEEHHHHHHC
DMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV
CEEEEECCCCCEEEECCCCCCEEEECCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCEEE
CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNA
ECCCCCCCCCCCCCCCEECCCCCCCEEEECCCCEECCCCCHHHCCHHHHCCCCEEEEEEE
ICTNTPGSYTCTCRPGYWGNGWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAP
EEECCCCCEEEEECCCCCCCCEECCCHHHHCCCCCCCCCCCEEEECCCCCEECCCCCCCC
RVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR
HHHHCCEEEECCCCCCCCCCCCEECCCCHHCCCCCEEEC
>Mature Secondary Structure
MLSNGTRVLDSKCVPLKLKMEFMRSLLWRLSGVTVLTSDRHPQVEADWSKTMKVSRVAPM
CCCCCCEEECCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
WRMLSAALAFGMMSACGSELEDESVVSEEAPVGGESSSDSASAMAGDRYANAVVQSGVIA
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCHHHHHHHHHCCEEE
VLNPNNAVGAPDGNAATFLGLLGGSMVLDMGLGEEGTGPLRVYYQGLSLAVIAQVEFLRG
EECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCEEEEEHHHHHHC
DMSIISTGQANLLDLGLGTHSTLVPFSSSTPYRYVRLRGGVASLYGLDAVEDTGGGASAV
CEEEEECCCCCEEEECCCCCCEEEECCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCEEE
CGDGRINNGEQCDDGNRVSSDGCSSTCRVEPGYTCNGMQPSVCTDVNECTNGTAQCSVNA
ECCCCCCCCCCCCCCCEECCCCCCCEEEECCCCEECCCCCHHHCCHHHHCCCCEEEEEEE
ICTNTPGSYTCTCRPGYWGNGWTCSDIDECSNGTAACNPSQVCVNTPGGYECVGGSCPAP
EEECCCCCEEEEECCCCCCCCEECCCHHHHCCCCCCCCCCCEEEECCCCCEECCCCCCCC
RVQCGAQCVDVSSDVNNCGACGVVCPAAKTCSSGVCVMR
HHHHCCEEEECCCCCCCCCCCCEECCCCHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA