| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760640
Identifier: 108760640
GI number: 108760640
Start: 6171174
End: 6172379
Strand: Reverse
Name: 108760640
Synonym: MXAN_4935
Alternate gene names: NA
Gene position: 6172379-6171174 (Counterclockwise)
Preceding gene: 108757642
Following gene: 108763164
Centisome position: 67.53
GC content: 64.59
Gene sequence:
>1206_bases ATGACGTGGTCGCTCCAACGTGTGCGTTGCCATGGCCAGATACGCACCCTAGCGTCGCACCTGCCATTGGCGGATGAAGA GCCCGTTGTCGCCCCACCTACTCTCCGAGGTCAGAGGATGCGCAGATTGCTGCCCCAGGACGTCTTTGTTTCCAGCACCG CTCTTGAACGATGCGAGTCTCCCGCCCGTGCCGCACTCAGACTCGTGGGAGTCTTTTTCGTCGCCCTGTTCCTCGGAGTG CCAGGCGGCGCGGAGGCATCCGATGCCTCGCTCGCGCCGAACTTCTATTCGGGACATGGAATCACGGTTCATGCGGTGCG GCACATCACGGATAGGCTCATCGACGTGGAAATCTCCACGCCGCTGATCGCGCCTCACGCGGTCTATGACCCACGCCACC ACGTTCGGGTGCTCCTGCCGACGGGGTATTACAACAACCCGGGCGTGCGTTACCCCGCGGTCTACCTGTTGCACGGGGGT GGAGGCGCGAACTCGGCTCAGTGGGTGGAGTTCGGTGCGGCGTATGCGATTACCGAGAACATGCCCGTCATCACCATCAT GCCGGATGGCGGCAAGGTCGGTTGGTACACGAACTGGGTCTTCCCTCGCGGGGTGAATCAGGCGTGGGAGGAGTTCCACC TCAACCAGCTCATTCCGTGGGTGGACCAGAACCTTCGCACGCTGGCGTACAAGCGGGGCCGTGCTATCGCGGGGCTGTCC ATGGGCGGCTTCGGGGCCATCAGCTATGCCGCGCGGCGCCCCGACCTGTTTGCCTATGCGGCCAGTTTCTCGGGGGCCCT GGACCTGGGTGACGCCGCCATCCGCGCCACCGTCACGGAGGAGGGGACACGGTGGCTTCAGAATCCGGATGGGGCGTTTG GCTCTCCCTTCTGGCCCTTCGACCAGGCCTGGAACATGAACAACCCCATTCCGCGTGCGGCGTCTCTGCGGGGCGTTGCC GTCGCCTTGTATGCGGGGTCGGGCATCTGGGATGGGGATGTGCTCGAACGCGTCCCGGGGGCGTCCACGGACCGGTTCCA CCATGCGCTGAATGCCGCGGGCGTGCCGCACCACTACGAGATGTATGGCCGCCCAGCGCCGGGCCAGAAGCCCTTCGGTT GTGACGGCGGACACAACTTCAGTTGCTGGAACTACGCGTTCTTCGACGTGCTGCCGCGCATGTTGGCCGTGCTTGACGGG CCGTAA
Upstream 100 bases:
>100_bases GGCCTTCCGGGACGAAGTGAGTCGCCACGAGATGCACTTAATGGACAGCTCACGTCCACAGTCGCGGGAAAGACACAGCC TCAGCGGCCCTCGCCAGGGA
Downstream 100 bases:
>100_bases GCCCAACGGCACGTCAGGTGATGGAGCCCTTCGTCCGATGCGAAGGGCTCCCACTGCCACCCGCGCGAGCGGAGCGCCTT CTTCCTGCGGCCTCTTGGGG
Product: putative esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTWSLQRVRCHGQIRTLASHLPLADEEPVVAPPTLRGQRMRRLLPQDVFVSSTALERCESPARAALRLVGVFFVALFLGV PGGAEASDASLAPNFYSGHGITVHAVRHITDRLIDVEISTPLIAPHAVYDPRHHVRVLLPTGYYNNPGVRYPAVYLLHGG GGANSAQWVEFGAAYAITENMPVITIMPDGGKVGWYTNWVFPRGVNQAWEEFHLNQLIPWVDQNLRTLAYKRGRAIAGLS MGGFGAISYAARRPDLFAYAASFSGALDLGDAAIRATVTEEGTRWLQNPDGAFGSPFWPFDQAWNMNNPIPRAASLRGVA VALYAGSGIWDGDVLERVPGASTDRFHHALNAAGVPHHYEMYGRPAPGQKPFGCDGGHNFSCWNYAFFDVLPRMLAVLDG P
Sequences:
>Translated_401_residues MTWSLQRVRCHGQIRTLASHLPLADEEPVVAPPTLRGQRMRRLLPQDVFVSSTALERCESPARAALRLVGVFFVALFLGV PGGAEASDASLAPNFYSGHGITVHAVRHITDRLIDVEISTPLIAPHAVYDPRHHVRVLLPTGYYNNPGVRYPAVYLLHGG GGANSAQWVEFGAAYAITENMPVITIMPDGGKVGWYTNWVFPRGVNQAWEEFHLNQLIPWVDQNLRTLAYKRGRAIAGLS MGGFGAISYAARRPDLFAYAASFSGALDLGDAAIRATVTEEGTRWLQNPDGAFGSPFWPFDQAWNMNNPIPRAASLRGVA VALYAGSGIWDGDVLERVPGASTDRFHHALNAAGVPHHYEMYGRPAPGQKPFGCDGGHNFSCWNYAFFDVLPRMLAVLDG P >Mature_400_residues TWSLQRVRCHGQIRTLASHLPLADEEPVVAPPTLRGQRMRRLLPQDVFVSSTALERCESPARAALRLVGVFFVALFLGVP GGAEASDASLAPNFYSGHGITVHAVRHITDRLIDVEISTPLIAPHAVYDPRHHVRVLLPTGYYNNPGVRYPAVYLLHGGG GANSAQWVEFGAAYAITENMPVITIMPDGGKVGWYTNWVFPRGVNQAWEEFHLNQLIPWVDQNLRTLAYKRGRAIAGLSM GGFGAISYAARRPDLFAYAASFSGALDLGDAAIRATVTEEGTRWLQNPDGAFGSPFWPFDQAWNMNNPIPRAASLRGVAV ALYAGSGIWDGDVLERVPGASTDRFHHALNAAGVPHHYEMYGRPAPGQKPFGCDGGHNFSCWNYAFFDVLPRMLAVLDGP
Specific function: Unknown
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 LysM repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR018392 - InterPro: IPR002482 - InterPro: IPR008861 [H]
Pfam domain/function: PF00756 Esterase; PF01476 LysM; PF05489 Phage_tail_X [H]
EC number: NA
Molecular weight: Translated: 43809; Mature: 43678
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWSLQRVRCHGQIRTLASHLPLADEEPVVAPPTLRGQRMRRLLPQDVFVSSTALERCES CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCC PARAALRLVGVFFVALFLGVPGGAEASDASLAPNFYSGHGITVHAVRHITDRLIDVEIST HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHEEEEEECC PLIAPHAVYDPRHHVRVLLPTGYYNNPGVRYPAVYLLHGGGGANSAQWVEFGAAYAITEN CEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCEEEEEECC MPVITIMPDGGKVGWYTNWVFPRGVNQAWEEFHLNQLIPWVDQNLRTLAYKRGRAIAGLS CCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEC MGGFGAISYAARRPDLFAYAASFSGALDLGDAAIRATVTEEGTRWLQNPDGAFGSPFWPF CCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECHHCHHHHCCCCCCCCCCCCCC DQAWNMNNPIPRAASLRGVAVALYAGSGIWDGDVLERVPGASTDRFHHALNAAGVPHHYE CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHH MYGRPAPGQKPFGCDGGHNFSCWNYAFFDVLPRMLAVLDGP HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TWSLQRVRCHGQIRTLASHLPLADEEPVVAPPTLRGQRMRRLLPQDVFVSSTALERCES CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCC PARAALRLVGVFFVALFLGVPGGAEASDASLAPNFYSGHGITVHAVRHITDRLIDVEIST HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHEEEEEECC PLIAPHAVYDPRHHVRVLLPTGYYNNPGVRYPAVYLLHGGGGANSAQWVEFGAAYAITEN CEECCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCEEEEEECC MPVITIMPDGGKVGWYTNWVFPRGVNQAWEEFHLNQLIPWVDQNLRTLAYKRGRAIAGLS CCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEC MGGFGAISYAARRPDLFAYAASFSGALDLGDAAIRATVTEEGTRWLQNPDGAFGSPFWPF CCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECHHCHHHHCCCCCCCCCCCCCC DQAWNMNNPIPRAASLRGVAVALYAGSGIWDGDVLERVPGASTDRFHHALNAAGVPHHYE CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCHHH MYGRPAPGQKPFGCDGGHNFSCWNYAFFDVLPRMLAVLDGP HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]