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The map label for this gene is ccmC [H]

Identifier: 108757543

GI number: 108757543

Start: 3809024

End: 3809737

Strand: Reverse

Name: ccmC [H]

Synonym: MXAN_3256

Alternate gene names: 108757543

Gene position: 3809737-3809024 (Counterclockwise)

Preceding gene: 108760001

Following gene: 108760859

Centisome position: 41.68

GC content: 69.05

Gene sequence:

>714_bases
ATGGGAAAGTTCATCAAGTGGGGCCTGCCGGCGCTGGCGCTGGTCGTTCTCGCCGCGGGGTGGTGGCTGGGACTGGAGTG
GGCACCGCCGGACCGCGAGATGGGTGACGTGCAGCGCATCATGTACGTCCACGTCCCGCTCCAGTGGGTGGCCATGGTGG
CCATGGCCATCAACTTCGTGGTGGCCATCAGCTACCTCATGAAGGCGAGCTGGAAGCTGGATGCCGCCGCCGAGGCGTCC
GCGGAGATTGGCCTGGTGCTGGGCACCGCGGGGATGATCACCGGCGCCATCTGGGGCCGGCCGACCTGGGGCGTCTACTG
GTCGTGGGATCCGCGCCTGACCTCGCAGGCCATCATGCTGGTGACGTACACCGGCTACCTCGTGCTGCGGCGCTTCGTGG
AGGACCCGGAGAAGCGCGCCACGTGGAGTTCGGTGGTGGCCATCATCGGCGCCATCAACCTGCCCATCGTCTGGTTCTCC
GTGCGCTGGTGGCGCAGCCTGCACCAGGTGCAGTCCACGCCGAAGACGGTGGACCCGGAGATGACGCTGGCCCTGCGCGT
GTCGGCCTTCGGCATGCTGTTCCTCACCCTCTGGTTCCTGGTGCTGCGCTACCGCCAGGCCCTGGCCGAGCGCGAGGCGG
AGGTGGCCCTCCCGGATGCGCTGCCGTCGGACCTCGCCGCTGCGGGTGGCGCCAACTCCACGAGGGTGGCCTGA

Upstream 100 bases:

>100_bases
GAATCAGTTTGGCTCATGGGTCGGGCTTTTGGGCGGATTCAATCTGATTTATTGGGGCATAGGCTTCTTGCTGTTCCCGC
GGATCATCGAGGACTGACGG

Downstream 100 bases:

>100_bases
ACATGATGACGCTTTCCACGCAGATGCTGTGGATCCTCGCGGCGGCGCCCGGACAGGTGGGCAGCGGCCGCATCGTTGGC
GGCTGGGGCTATGTCTGGGC

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MGKFIKWGLPALALVVLAAGWWLGLEWAPPDREMGDVQRIMYVHVPLQWVAMVAMAINFVVAISYLMKASWKLDAAAEAS
AEIGLVLGTAGMITGAIWGRPTWGVYWSWDPRLTSQAIMLVTYTGYLVLRRFVEDPEKRATWSSVVAIIGAINLPIVWFS
VRWWRSLHQVQSTPKTVDPEMTLALRVSAFGMLFLTLWFLVLRYRQALAEREAEVALPDALPSDLAAAGGANSTRVA

Sequences:

>Translated_237_residues
MGKFIKWGLPALALVVLAAGWWLGLEWAPPDREMGDVQRIMYVHVPLQWVAMVAMAINFVVAISYLMKASWKLDAAAEAS
AEIGLVLGTAGMITGAIWGRPTWGVYWSWDPRLTSQAIMLVTYTGYLVLRRFVEDPEKRATWSSVVAIIGAINLPIVWFS
VRWWRSLHQVQSTPKTVDPEMTLALRVSAFGMLFLTLWFLVLRYRQALAEREAEVALPDALPSDLAAAGGANSTRVA
>Mature_236_residues
GKFIKWGLPALALVVLAAGWWLGLEWAPPDREMGDVQRIMYVHVPLQWVAMVAMAINFVVAISYLMKASWKLDAAAEASA
EIGLVLGTAGMITGAIWGRPTWGVYWSWDPRLTSQAIMLVTYTGYLVLRRFVEDPEKRATWSSVVAIIGAINLPIVWFSV
RWWRSLHQVQSTPKTVDPEMTLALRVSAFGMLFLTLWFLVLRYRQALAEREAEVALPDALPSDLAAAGGANSTRVA

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=217, Percent_Identity=35.4838709677419, Blast_Score=130, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 26360; Mature: 26229

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFIKWGLPALALVVLAAGWWLGLEWAPPDREMGDVQRIMYVHVPLQWVAMVAMAINFV
CCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCHHHHHHHHHHHHHH
VAISYLMKASWKLDAAAEASAEIGLVLGTAGMITGAIWGRPTWGVYWSWDPRLTSQAIML
HHHHHHHHHCCCCCCHHCCCCCEEEEEEHHHHHHHHHCCCCCCCEEECCCCCCHHHEEEE
VTYTGYLVLRRFVEDPEKRATWSSVVAIIGAINLPIVWFSVRWWRSLHQVQSTPKTVDPE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
MTLALRVSAFGMLFLTLWFLVLRYRQALAEREAEVALPDALPSDLAAAGGANSTRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GKFIKWGLPALALVVLAAGWWLGLEWAPPDREMGDVQRIMYVHVPLQWVAMVAMAINFV
CCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCHHHHHHHHHHHHHH
VAISYLMKASWKLDAAAEASAEIGLVLGTAGMITGAIWGRPTWGVYWSWDPRLTSQAIML
HHHHHHHHHCCCCCCHHCCCCCEEEEEEHHHHHHHHHCCCCCCCEEECCCCCCHHHEEEE
VTYTGYLVLRRFVEDPEKRATWSSVVAIIGAINLPIVWFSVRWWRSLHQVQSTPKTVDPE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
MTLALRVSAFGMLFLTLWFLVLRYRQALAEREAEVALPDALPSDLAAAGGANSTRVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]