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The map label for this gene is nrfA [H]

Identifier: 108757374

GI number: 108757374

Start: 2550088

End: 2551572

Strand: Reverse

Name: nrfA [H]

Synonym: MXAN_2209

Alternate gene names: 108757374

Gene position: 2551572-2550088 (Counterclockwise)

Preceding gene: 108758519

Following gene: 108761790

Centisome position: 27.92

GC content: 66.8

Gene sequence:

>1485_bases
ATGACCGAGCCCGAGAAGCAACGGCGCTTCAGCGGCGTCAAGCTGGTGATTGCCGTGGCGGTGGCCGCCGCTCTGGCCGC
CGCTGGCGTCACCGCGCTCCTGGTCAACATCATGGAGCGCAAGCAGGAGGCGAAGAATCCCTTCTACCGGGTGGTGGAGC
TGGACGACACCATCACCGACCCCGAGGTGTGGGGACGGAACTTCCCGCTTCAGTACGACAGCTACAAGCGCACCGTGGAC
CAGCAGCGCACCCGTTACGGCGGCAGTGAAGCCGTGGCGCGCACGCCGTCCCAGGCGGACCCACGCACCGTCGTCGCGCA
GAGCCGGCTCGAGGAGGACCCTCGGCTGGTGACGATGTGGAGCGGCTACGCCTTCGCCACGGACTTCCGCGAGGAGCGCG
GCCACGCGCACATGCTGGACGACCAGGTCTACACCGAGCGCCAGCACGTGACGCAGCAGCCGGGCACCTGCATCCACTGC
CACGCCAGCGTGTACGTGCCCTACAAGAAGCTCGGCGACGGCGACCTCATCAAGGGCTTCGAGAAGATGAACCAGATGCC
CTTCATGGAGGCGCGCAAGCTGGTGGAGCACCCCGTCTCATGCATCGACTGCCACGACCCCACCACGATGCAGCTGCGCG
TGACGCGGCCTGGCTTCATCGAGGGCATCGCCGCGCTCAAGGCCAGCCAGGGCGTGCCCAACTTCCGGGTGAATCAGGAC
GCGACGCGCCAGGAGATGCGCACGTACGTGTGCGGGCAGTGCCACGTCGAGTACTACTTCAAGGGCAAGGAGAAGCGCCT
CACGTACCCCTGGGCCAAGGGCATCAACATCGATCAGATCATGGCCTACTACGACGAGGACGGACACTCCGACTGGACGC
ACGAGCTCACGGGCGCCAAGGTGCTGAAGGCGCAGCACCCCGAGTTCGAGATGTACAACCAGGGCATCCACGCGAAGAGC
GGCGTGGCCTGCGCGGACTGCCACATGCCGTTCATGCGCGAGGGGGCGATGAAGGTCAGCGACCACCAGGTGCGCAGCCC
GCTGCTGAACATCAACCGCGCGTGCCAGACGTGCCACAAGTGGAGCGAGGCGGAGCTGCTCCAGCGCGCGGAGACCATCC
AGACGCGCACCTTCGAGACGCGGAACATCGCCATGGATGCGCTGGTGGACCTCATCCATGACATCGAGGCCGCGCAGAAG
GCGGGGCAGTCCGAGGAGGCGCTCGCCAAGGCGCGCGACCTGCAGAAGCGCGCTCAATTCTACCTGGACTTCGTGGAGGC
GGAGAACTCCATGGGCTTCCACGCGGACCAGGAGGCGGTGCGCATCCTGAGCAACTCCATCAACTTCTCACGCCTGGGCC
AGAACGCGCTGCGTCCCAGTGGTGGCGCCTCCACCAGCCCCACCACGCGGCCTCAAGGCGCTCCGGCGCCGCTGACGCCC
GTGTCCACGGATGGCGCGGGTGAGACGCAGCAGGGCTCGAAGTAG

Upstream 100 bases:

>100_bases
CGCCCCACGCAGACTCGCTGCAGTGCCTCACCTGCCACAACTCAGTGGGGCACCCCGAAGGCTCCGGGAACCCCGAACTC
ATCCATCAGGAGGTTGAACG

Downstream 100 bases:

>100_bases
GCACGGCGAGCGGAAGCGGGAGGTACCCGCTTCCGCCGTCCGCCGAAGCTGCTACTCGGCGCGCACCCAGTACTGGGTGC
GGCCCAGCAGCGACATGCCG

Product: putative cytochrome c nitrite reductase catalytic subunit NrfA

Products: NA

Alternate protein names: Ammonia-forming cytochrome c nitrite reductase; Cytochrome c nitrite reductase [H]

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MTEPEKQRRFSGVKLVIAVAVAAALAAAGVTALLVNIMERKQEAKNPFYRVVELDDTITDPEVWGRNFPLQYDSYKRTVD
QQRTRYGGSEAVARTPSQADPRTVVAQSRLEEDPRLVTMWSGYAFATDFREERGHAHMLDDQVYTERQHVTQQPGTCIHC
HASVYVPYKKLGDGDLIKGFEKMNQMPFMEARKLVEHPVSCIDCHDPTTMQLRVTRPGFIEGIAALKASQGVPNFRVNQD
ATRQEMRTYVCGQCHVEYYFKGKEKRLTYPWAKGINIDQIMAYYDEDGHSDWTHELTGAKVLKAQHPEFEMYNQGIHAKS
GVACADCHMPFMREGAMKVSDHQVRSPLLNINRACQTCHKWSEAELLQRAETIQTRTFETRNIAMDALVDLIHDIEAAQK
AGQSEEALAKARDLQKRAQFYLDFVEAENSMGFHADQEAVRILSNSINFSRLGQNALRPSGGASTSPTTRPQGAPAPLTP
VSTDGAGETQQGSK

Sequences:

>Translated_494_residues
MTEPEKQRRFSGVKLVIAVAVAAALAAAGVTALLVNIMERKQEAKNPFYRVVELDDTITDPEVWGRNFPLQYDSYKRTVD
QQRTRYGGSEAVARTPSQADPRTVVAQSRLEEDPRLVTMWSGYAFATDFREERGHAHMLDDQVYTERQHVTQQPGTCIHC
HASVYVPYKKLGDGDLIKGFEKMNQMPFMEARKLVEHPVSCIDCHDPTTMQLRVTRPGFIEGIAALKASQGVPNFRVNQD
ATRQEMRTYVCGQCHVEYYFKGKEKRLTYPWAKGINIDQIMAYYDEDGHSDWTHELTGAKVLKAQHPEFEMYNQGIHAKS
GVACADCHMPFMREGAMKVSDHQVRSPLLNINRACQTCHKWSEAELLQRAETIQTRTFETRNIAMDALVDLIHDIEAAQK
AGQSEEALAKARDLQKRAQFYLDFVEAENSMGFHADQEAVRILSNSINFSRLGQNALRPSGGASTSPTTRPQGAPAPLTP
VSTDGAGETQQGSK
>Mature_493_residues
TEPEKQRRFSGVKLVIAVAVAAALAAAGVTALLVNIMERKQEAKNPFYRVVELDDTITDPEVWGRNFPLQYDSYKRTVDQ
QRTRYGGSEAVARTPSQADPRTVVAQSRLEEDPRLVTMWSGYAFATDFREERGHAHMLDDQVYTERQHVTQQPGTCIHCH
ASVYVPYKKLGDGDLIKGFEKMNQMPFMEARKLVEHPVSCIDCHDPTTMQLRVTRPGFIEGIAALKASQGVPNFRVNQDA
TRQEMRTYVCGQCHVEYYFKGKEKRLTYPWAKGINIDQIMAYYDEDGHSDWTHELTGAKVLKAQHPEFEMYNQGIHAKSG
VACADCHMPFMREGAMKVSDHQVRSPLLNINRACQTCHKWSEAELLQRAETIQTRTFETRNIAMDALVDLIHDIEAAQKA
GQSEEALAKARDLQKRAQFYLDFVEAENSMGFHADQEAVRILSNSINFSRLGQNALRPSGGASTSPTTRPQGAPAPLTPV
STDGAGETQQGSK

Specific function: Plays a role in nitrite reduction [H]

COG id: COG3303

COG function: function code P; Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c-552 family [H]

Homologues:

Organism=Escherichia coli, GI1790506, Length=348, Percent_Identity=30.7471264367816, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003321
- InterPro:   IPR017570
- InterPro:   IPR011031 [H]

Pfam domain/function: PF02335 Cytochrom_C552 [H]

EC number: =1.7.2.2 [H]

Molecular weight: Translated: 55458; Mature: 55327

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPEKQRRFSGVKLVIAVAVAAALAAAGVTALLVNIMERKQEAKNPFYRVVELDDTITD
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PEVWGRNFPLQYDSYKRTVDQQRTRYGGSEAVARTPSQADPRTVVAQSRLEEDPRLVTMW
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEE
SGYAFATDFREERGHAHMLDDQVYTERQHVTQQPGTCIHCHASVYVPYKKLGDGDLIKGF
CCCEEEHHHHHHCCCCEECCHHHHHHHHHHHCCCCCEEEEEEEEEECHHHCCCCHHHHHH
EKMNQMPFMEARKLVEHPVSCIDCHDPTTMQLRVTRPGFIEGIAALKASQGVPNFRVNQD
HHHCCCCHHHHHHHHHCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCH
ATRQEMRTYVCGQCHVEYYFKGKEKRLTYPWAKGINIDQIMAYYDEDGHSDWTHELTGAK
HHHHHHHHHHCCCEEEEEEEECCCCEEECCHHCCCCHHHHHHHHCCCCCCCCHHHHCCHH
VLKAQHPEFEMYNQGIHAKSGVACADCHMPFMREGAMKVSDHQVRSPLLNINRACQTCHK
HHHCCCCCHHHHHCCCCCCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
WSEAELLQRAETIQTRTFETRNIAMDALVDLIHDIEAAQKAGQSEEALAKARDLQKRAQF
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YLDFVEAENSMGFHADQEAVRILSNSINFSRLGQNALRPSGGASTSPTTRPQGAPAPLTP
HHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCC
VSTDGAGETQQGSK
CCCCCCCCCCCCCC
>Mature Secondary Structure 
TEPEKQRRFSGVKLVIAVAVAAALAAAGVTALLVNIMERKQEAKNPFYRVVELDDTITD
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PEVWGRNFPLQYDSYKRTVDQQRTRYGGSEAVARTPSQADPRTVVAQSRLEEDPRLVTMW
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEE
SGYAFATDFREERGHAHMLDDQVYTERQHVTQQPGTCIHCHASVYVPYKKLGDGDLIKGF
CCCEEEHHHHHHCCCCEECCHHHHHHHHHHHCCCCCEEEEEEEEEECHHHCCCCHHHHHH
EKMNQMPFMEARKLVEHPVSCIDCHDPTTMQLRVTRPGFIEGIAALKASQGVPNFRVNQD
HHHCCCCHHHHHHHHHCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCH
ATRQEMRTYVCGQCHVEYYFKGKEKRLTYPWAKGINIDQIMAYYDEDGHSDWTHELTGAK
HHHHHHHHHHCCCEEEEEEEECCCCEEECCHHCCCCHHHHHHHHCCCCCCCCHHHHCCHH
VLKAQHPEFEMYNQGIHAKSGVACADCHMPFMREGAMKVSDHQVRSPLLNINRACQTCHK
HHHCCCCCHHHHHCCCCCCCCCEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
WSEAELLQRAETIQTRTFETRNIAMDALVDLIHDIEAAQKAGQSEEALAKARDLQKRAQF
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YLDFVEAENSMGFHADQEAVRILSNSINFSRLGQNALRPSGGASTSPTTRPQGAPAPLTP
HHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCC
VSTDGAGETQQGSK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA