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The map label for this gene is nrfH [H]

Identifier: 108758519

GI number: 108758519

Start: 2551569

End: 2552063

Strand: Reverse

Name: nrfH [H]

Synonym: MXAN_2210

Alternate gene names: 108758519

Gene position: 2552063-2551569 (Counterclockwise)

Preceding gene: 108763486

Following gene: 108757374

Centisome position: 27.92

GC content: 66.46

Gene sequence:

>495_bases
GTGTCCTCGGCCTCCCGCACACTCCTGGCAGTGGCCCTGGGGCTCGCCCTGGGCTCGGCCATTGGCATCGGTGGCTACAC
CTTCGCGTACGCGAAGGGCGCGGCCTACCTGCATGACGACCCAGCCGCCTGCGCCAACTGCCACATCATGACCGAGCAGT
ACGATGGCTGGCGCAAGAGCAGCCACCACGCGGTGGCCACCTGTAACGACTGCCACACGCCGGCGGCGCTGGTGCCCAAG
TACCTCAACAAGGCGAGCAACGGCTTCTGGCACTCCTTCTACTTCACCACCGGCACCTTCCCGGACCCCATCCGCATCCG
CCCCGCCAACCGGCAGGTGACGGAGAGCGCTTGCCGGAACTGCCACGCCAGCCTCGTGGAGAGCATCGAAACGCCCCACG
CAGACTCGCTGCAGTGCCTCACCTGCCACAACTCAGTGGGGCACCCCGAAGGCTCCGGGAACCCCGAACTCATCCATCAG
GAGGTTGAACGATGA

Upstream 100 bases:

>100_bases
ATTTCGCAACCCGGCTCCGGCCTCCCAAACGGCGTGGAAATTCGCACGCGATTGCGAGATGGGGCTAGCCGTCTGCACAA
CCGTTGATACGGTGTTCCGC

Downstream 100 bases:

>100_bases
CCGAGCCCGAGAAGCAACGGCGCTTCAGCGGCGTCAAGCTGGTGATTGCCGTGGCGGTGGCCGCCGCTCTGGCCGCCGCT
GGCGTCACCGCGCTCCTGGT

Product: putative cytochrome c nitrite reductase small subunit NrfH

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSSASRTLLAVALGLALGSAIGIGGYTFAYAKGAAYLHDDPAACANCHIMTEQYDGWRKSSHHAVATCNDCHTPAALVPK
YLNKASNGFWHSFYFTTGTFPDPIRIRPANRQVTESACRNCHASLVESIETPHADSLQCLTCHNSVGHPEGSGNPELIHQ
EVER

Sequences:

>Translated_164_residues
MSSASRTLLAVALGLALGSAIGIGGYTFAYAKGAAYLHDDPAACANCHIMTEQYDGWRKSSHHAVATCNDCHTPAALVPK
YLNKASNGFWHSFYFTTGTFPDPIRIRPANRQVTESACRNCHASLVESIETPHADSLQCLTCHNSVGHPEGSGNPELIHQ
EVER
>Mature_163_residues
SSASRTLLAVALGLALGSAIGIGGYTFAYAKGAAYLHDDPAACANCHIMTEQYDGWRKSSHHAVATCNDCHTPAALVPKY
LNKASNGFWHSFYFTTGTFPDPIRIRPANRQVTESACRNCHASLVESIETPHADSLQCLTCHNSVGHPEGSGNPELIHQE
VER

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 17683; Mature: 17552

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSASRTLLAVALGLALGSAIGIGGYTFAYAKGAAYLHDDPAACANCHIMTEQYDGWRKS
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCHHEEEEEECCCCCCCCC
SHHAVATCNDCHTPAALVPKYLNKASNGFWHSFYFTTGTFPDPIRIRPANRQVTESACRN
CCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHH
CHASLVESIETPHADSLQCLTCHNSVGHPEGSGNPELIHQEVER
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SSASRTLLAVALGLALGSAIGIGGYTFAYAKGAAYLHDDPAACANCHIMTEQYDGWRKS
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCHHEEEEEECCCCCCCCC
SHHAVATCNDCHTPAALVPKYLNKASNGFWHSFYFTTGTFPDPIRIRPANRQVTESACRN
CCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHH
CHASLVESIETPHADSLQCLTCHNSVGHPEGSGNPELIHQEVER
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]