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The map label for this gene is ompR [H]

Identifier: 108757101

GI number: 108757101

Start: 6320691

End: 6322541

Strand: Reverse

Name: ompR [H]

Synonym: MXAN_5053

Alternate gene names: 108757101

Gene position: 6322541-6320691 (Counterclockwise)

Preceding gene: 108761193

Following gene: 108763322

Centisome position: 69.18

GC content: 69.58

Gene sequence:

>1851_bases
GTGGCCGGACCCATCCTCGTCGTCGACGACGACATGTTCTTCCGTCAGCTCGCCAGCGACTTGCTCACGCATAACGGGCA
TCGCGTGGTGGCCGTGGAGAACGCAACGCTCGCGCTCGAAGAGGCGGCACGCACGTCGTTCGACCTGGTCATCACCGATG
TGGTGATGCCAGGCGTGGACGGCTTCGCTCTCACCGCGCGCCTGCGCGAGCGGGACCCCGACCAGGAGGTCATCCTCGTC
AGCCAGCGCACCGACATCCGGGGCTCGGAGGTGGCGCTGCGCTCGGGCGCGGCGGACTGCCTCTCCAAGCCGGTGAACGC
CAACGACATGCTGCTCGCCGTGGACCGGGCGCTGGAGCGCGCGTCCCTGCGCCGCGAGCGGACGCAGCTTCGTGACGAGA
ACCTGGAGTTCGCCCGCTTCCACAACCTGCACCAGCGCTGCCTGGAGCTCCTGTCCCATCCCGACCTGGAGTGGCTCCAG
GAGCGGCTCACCTCGGAGCTGGCGGCCATCTGCGACGCGCAGAGCGCCGCGCTGTGGGTGGTGGACGACCGGGGAGACCT
GGTGCTGCGGGCCTACCGCGGGCTGCTGGACCGGCAGTTTCTCGCGGAGAAGATGAGCCCGGAAGGGCCGCTGTCCGGAC
GCCTGAGAGAGGCCCAGCCGTGGCTGGCCCGCGACGAGCGCTCGTCGGTGATGTACGTGCCCCTGGTGGCGTCGGGGGAA
GTCGTCGGGTTGGCGCAACTCTCCGACCCGCTGTCAGGAGACTTCCGGCCCGAGCATTCGCGCGATGCCCGCCTGCTGGG
TGACTTCGCGGCGGTGGGCCTGAAGAACGGCCGGAAGATGCTCGCGCTCCAGCGCCTGGGCCTGAGAGACCGCGAGACGG
CGGCGTACAACCTCAGCTACTTCACCGACTACGCGTCCAAGGAAATCTACAAGGCCCGGCGCTACGGGCGGACGTTCTCC
CTGCTGACCTTCTCCATCGACAACCTGCCGCTGGTGCGCGTGCGCCAGGGCGCGGCGGACGCGAAGAAGGCGGTGCGCGG
CATCATCAAGGCGCTCAGCAAGATCATCCGCGACTCGGATGTCATCGCGAAGGCGAGCGACCAGGAGTTCTACCTCCTGC
TGCCTGAGACGGACTTCTTCGGGGCGTTGATGTTCGTGCGCCGCGCCGTGGCCGCCGTGCGCGAGGAGCCCGAGGCCATG
GAGGTGGACCAGCGCCTCCCGCTGGCGATGGTGGGCGGGGCCAGCACCTTCCCCAAGGACGGCGAGGACTTCGACGAGCT
GGTGCACCGCTGCCGCCGCCGCATGGACGAGCGGCGCGCGTCGTTGCAGCGCCGGCTGATGCTGGACGGGCTGCCCTTCT
GGGACGAGGTGGACCTGCTCCTGGGCACGCCGAACAGCCCCCGGCTGCCGGTGGACGAGCGCTCCGAGCCGAGCCGCCGG
GGCAAGGTGTCCGACGTCCTCTTCGACGAACTCCAGGCGGAGATTGCCCGGGAGATGATGCGGGACCCAGGCTCGCGCGG
CCTGCTGTACGTGGGCGGGCCGGAGATTCGCACGGACCTGAACATCGCCGCCGGGCTGGAGTCCGCGCCTCCAGATTTGG
CGTCGCGCATCTACCTGCTGGGCCGCCGCGTCGACCTGGAGTCACACCCCGCGCTGACGCCTGTGTTCCTGGAAGGCGAC
GACCGCATCGCGCGGCACGAGTTCATCCTCTGGCTCTCCGAGAACGCGGCCTACGCGCTCATCCAGCGGCGGGGCCACGG
AGCGACGTGGGGGTTCCACACCTCGGACACCGCGGTGGTGGACGGGCTCATCTCCAAGCTGCAGGCCGAATACGACCTGC
AGCCCTACTGA

Upstream 100 bases:

>100_bases
GCCTCCGTGGACCGGTGGCCTTCGTCTTCGAGGGCGTTGTCGCGACTCCCTCGGGCCGGTAACCTCCCGCGTTCCTCTCG
CTCCCAGGTCAGAACGCGCC

Downstream 100 bases:

>100_bases
CACGAAGCGGAGCGCCACCGTGGCCCCGGTCCGGAAAATCCTCATCGCCGACCCTGACCTCGAGTCGGTGCGCTCGCTGT
CGCGGGCGCTGCGCACCAAG

Product: response regulator/GGDEF/GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MAGPILVVDDDMFFRQLASDLLTHNGHRVVAVENATLALEEAARTSFDLVITDVVMPGVDGFALTARLRERDPDQEVILV
SQRTDIRGSEVALRSGAADCLSKPVNANDMLLAVDRALERASLRRERTQLRDENLEFARFHNLHQRCLELLSHPDLEWLQ
ERLTSELAAICDAQSAALWVVDDRGDLVLRAYRGLLDRQFLAEKMSPEGPLSGRLREAQPWLARDERSSVMYVPLVASGE
VVGLAQLSDPLSGDFRPEHSRDARLLGDFAAVGLKNGRKMLALQRLGLRDRETAAYNLSYFTDYASKEIYKARRYGRTFS
LLTFSIDNLPLVRVRQGAADAKKAVRGIIKALSKIIRDSDVIAKASDQEFYLLLPETDFFGALMFVRRAVAAVREEPEAM
EVDQRLPLAMVGGASTFPKDGEDFDELVHRCRRRMDERRASLQRRLMLDGLPFWDEVDLLLGTPNSPRLPVDERSEPSRR
GKVSDVLFDELQAEIAREMMRDPGSRGLLYVGGPEIRTDLNIAAGLESAPPDLASRIYLLGRRVDLESHPALTPVFLEGD
DRIARHEFILWLSENAAYALIQRRGHGATWGFHTSDTAVVDGLISKLQAEYDLQPY

Sequences:

>Translated_616_residues
MAGPILVVDDDMFFRQLASDLLTHNGHRVVAVENATLALEEAARTSFDLVITDVVMPGVDGFALTARLRERDPDQEVILV
SQRTDIRGSEVALRSGAADCLSKPVNANDMLLAVDRALERASLRRERTQLRDENLEFARFHNLHQRCLELLSHPDLEWLQ
ERLTSELAAICDAQSAALWVVDDRGDLVLRAYRGLLDRQFLAEKMSPEGPLSGRLREAQPWLARDERSSVMYVPLVASGE
VVGLAQLSDPLSGDFRPEHSRDARLLGDFAAVGLKNGRKMLALQRLGLRDRETAAYNLSYFTDYASKEIYKARRYGRTFS
LLTFSIDNLPLVRVRQGAADAKKAVRGIIKALSKIIRDSDVIAKASDQEFYLLLPETDFFGALMFVRRAVAAVREEPEAM
EVDQRLPLAMVGGASTFPKDGEDFDELVHRCRRRMDERRASLQRRLMLDGLPFWDEVDLLLGTPNSPRLPVDERSEPSRR
GKVSDVLFDELQAEIAREMMRDPGSRGLLYVGGPEIRTDLNIAAGLESAPPDLASRIYLLGRRVDLESHPALTPVFLEGD
DRIARHEFILWLSENAAYALIQRRGHGATWGFHTSDTAVVDGLISKLQAEYDLQPY
>Mature_615_residues
AGPILVVDDDMFFRQLASDLLTHNGHRVVAVENATLALEEAARTSFDLVITDVVMPGVDGFALTARLRERDPDQEVILVS
QRTDIRGSEVALRSGAADCLSKPVNANDMLLAVDRALERASLRRERTQLRDENLEFARFHNLHQRCLELLSHPDLEWLQE
RLTSELAAICDAQSAALWVVDDRGDLVLRAYRGLLDRQFLAEKMSPEGPLSGRLREAQPWLARDERSSVMYVPLVASGEV
VGLAQLSDPLSGDFRPEHSRDARLLGDFAAVGLKNGRKMLALQRLGLRDRETAAYNLSYFTDYASKEIYKARRYGRTFSL
LTFSIDNLPLVRVRQGAADAKKAVRGIIKALSKIIRDSDVIAKASDQEFYLLLPETDFFGALMFVRRAVAAVREEPEAME
VDQRLPLAMVGGASTFPKDGEDFDELVHRCRRRMDERRASLQRRLMLDGLPFWDEVDLLLGTPNSPRLPVDERSEPSRRG
KVSDVLFDELQAEIAREMMRDPGSRGLLYVGGPEIRTDLNIAAGLESAPPDLASRIYLLGRRVDLESHPALTPVFLEGDD
RIARHEFILWLSENAAYALIQRRGHGATWGFHTSDTAVVDGLISKLQAEYDLQPY

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=126, Percent_Identity=36.5079365079365, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1790299, Length=133, Percent_Identity=32.3308270676692, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788550, Length=122, Percent_Identity=31.1475409836066, Blast_Score=62, Evalue=9e-11,
Organism=Escherichia coli, GI145693157, Length=102, Percent_Identity=36.2745098039216, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 69128; Mature: 68996

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPILVVDDDMFFRQLASDLLTHNGHRVVAVENATLALEEAARTSFDLVITDVVMPGVD
CCCCEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCHHEEEEHHHHCCCC
GFALTARLRERDPDQEVILVSQRTDIRGSEVALRSGAADCLSKPVNANDMLLAVDRALER
CHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHH
ASLRRERTQLRDENLEFARFHNLHQRCLELLSHPDLEWLQERLTSELAAICDAQSAALWV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
VDDRGDLVLRAYRGLLDRQFLAEKMSPEGPLSGRLREAQPWLARDERSSVMYVPLVASGE
EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
VVGLAQLSDPLSGDFRPEHSRDARLLGDFAAVGLKNGRKMLALQRLGLRDRETAAYNLSY
EEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEHHH
FTDYASKEIYKARRYGRTFSLLTFSIDNLPLVRVRQGAADAKKAVRGIIKALSKIIRDSD
HHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
VIAKASDQEFYLLLPETDFFGALMFVRRAVAAVREEPEAMEVDQRLPLAMVGGASTFPKD
CEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCCC
GEDFDELVHRCRRRMDERRASLQRRLMLDGLPFWDEVDLLLGTPNSPRLPVDERSEPSRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
GKVSDVLFDELQAEIAREMMRDPGSRGLLYVGGPEIRTDLNIAAGLESAPPDLASRIYLL
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCHHCCCCCCCCHHHHHHHHHH
GRRVDLESHPALTPVFLEGDDRIARHEFILWLSENAAYALIQRRGHGATWGFHTSDTAVV
HCEECCCCCCCCEEEEECCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHH
DGLISKLQAEYDLQPY
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AGPILVVDDDMFFRQLASDLLTHNGHRVVAVENATLALEEAARTSFDLVITDVVMPGVD
CCCEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCHHEEEEHHHHCCCC
GFALTARLRERDPDQEVILVSQRTDIRGSEVALRSGAADCLSKPVNANDMLLAVDRALER
CHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHH
ASLRRERTQLRDENLEFARFHNLHQRCLELLSHPDLEWLQERLTSELAAICDAQSAALWV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
VDDRGDLVLRAYRGLLDRQFLAEKMSPEGPLSGRLREAQPWLARDERSSVMYVPLVASGE
EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
VVGLAQLSDPLSGDFRPEHSRDARLLGDFAAVGLKNGRKMLALQRLGLRDRETAAYNLSY
EEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEHHH
FTDYASKEIYKARRYGRTFSLLTFSIDNLPLVRVRQGAADAKKAVRGIIKALSKIIRDSD
HHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
VIAKASDQEFYLLLPETDFFGALMFVRRAVAAVREEPEAMEVDQRLPLAMVGGASTFPKD
CEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCCC
GEDFDELVHRCRRRMDERRASLQRRLMLDGLPFWDEVDLLLGTPNSPRLPVDERSEPSRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
GKVSDVLFDELQAEIAREMMRDPGSRGLLYVGGPEIRTDLNIAAGLESAPPDLASRIYLL
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCHHCCCCCCCCHHHHHHHHHH
GRRVDLESHPALTPVFLEGDDRIARHEFILWLSENAAYALIQRRGHGATWGFHTSDTAVV
HCEECCCCCCCCEEEEECCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCHHHH
DGLISKLQAEYDLQPY
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]