| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ape2 [H]
Identifier: 108757087
GI number: 108757087
Start: 6418856
End: 6420610
Strand: Direct
Name: ape2 [H]
Synonym: MXAN_5137
Alternate gene names: 108757087
Gene position: 6418856-6420610 (Clockwise)
Preceding gene: 108757176
Following gene: 108763833
Centisome position: 70.23
GC content: 70.26
Gene sequence:
>1755_bases ATGGCTCGCCTCGACCCGCACTCGTACAACGACAGCACGCAGCCTGAGACGGAAACCCTGGACTGGAGGGCCCGCGTCGA TTTCAAGACGCAGCGGCTGCACGCGGAGGTCACCCACACCCTCAAGGAAGCCTCGGCCGGGCCGCTGGACCTGGATACCC GGGATTTGGAAATCCGTGACGTCATCGACGCCGCGGGTCGTCCCTTGCCCTACATCCTCTCCCCTTCCGAGCCGATTCTC GGCAGCCGGCTGCGCATCGAGCTGCCGGTGGGACTGCGGCAATTCACCGTGCGCTACCGCACGGCGCCGCACGCCAGCGC GCTCCAGTGGCTGACGCCCTCCCAGACGGCCGGGGGGAAGCACCCCTTCCTCTACAGCCAGTGCCAGGCCATCCACGCCC GAAGCGTGGTGCCGCTCCAGGACACGCCGCGCATCCGCATCCGCTACACCGCGTCGCTGCGGATTCCCAAGGCGCTCAAG GCCGTCATGGCCGCCAGCTTCCTGCGGCGCGAGGAGCATGGCGTGGAGGCGGAGGAGCACTACGAGATGCCCCAGCCGGT GCCTCCGTACCTGCTGGCCTTCGCGGTGGGCAGCCTGGCGCCGAAGGAGCTGGGGCCGCGCTCGCGCGTGTGGGCGGAGC CGGAGCTGCTGGAGGACGCGGCGGAGGAGTTCTCCGGCGTGGACGACATGCTGCGCGCCGCCGAGTCGCTCTTCGGGCCC TATGACTGGGAGCGCTTCGACCTGCTCACCATGCCGCCATCGTTCCCCTACGGCGGCATGGAGAACCCGCGCCTGACGTT CCTCACGCCCACGCTCATCACCGGAGACAAGAGCCTGGTCAACGTGGTGGCGCACGAGTTGGCGCACTCGTGGACGGGCA ACCTGGTGACGAACGCCTCCGCGGAGCACTTCTGGCTCAACGAGGGCTTCACCGTCTTCGCCGAGCGCCGCATCCTGGAG GTCCTGGAGGGTCCGGAAGTGTCGGCGCTGCACGGCGCGCTGGGCCGCCGCGCGCTGGACTCCGCGCTGCAGCACTTCCG CGCGCACCCGCAGCTGACGTCGCTGCGCACCCACCTGGCCGGCGTGGACCCGGACGAGGCCTTCTCCCAGATTCCCTACG AGAAGGGCTACCTGCTGCTGCGCGCCATGGAGGACGCGGCCGGGCGGCCCGCCTTCGACGAGTTCCTCCGCCGCTACCTG GCCACCTACCGCTTCCGCGCGCTCACCACCGAGGAGTTCGTCGCCTTCGCGGAGAAGGAACTGCCCGGCGTGCTGACCAA GGTGGACGCGGAGGCATACCTGCACCGGCCCGGCGTGCCCCCCGGGGCGCCGTCACCGCGCTCCCTGCGGCTGGAGGCCA TGGACGCGCTGCGCGGCAAGGTGCCCACGCCGGAGCAGGCGAAGGACTGGACGCCGGCCGAGTGGCAGCTCTACCTGGAG TCACTGCCCTGGGACATTCCACGGGACGTCATCCAGCAACTCGACGCGCGCTTCAGCCTCACCGAGAGCCGCAACTCGGA GGTGCTGGTGGCGTGGCTGGTGGTGGCGCTGCGCGCGGACTGGGAGCCGGCCGTGGCTCGCACCGAGACGTTCCTCGGCG AGGTGGGCCGGATGAAGTACCTCAAGCCGCTGTACGGGGTGCTCTCCGCGTCGCATGCGCACCGGAGTCTGGCGCGCGCG CTCTTCAAGAAGCACGGGGAGCGCTACCACCCCATCGCCCGTCAGGGCGTGGAGCTCATCCTTTCGCGCGCCTGA
Upstream 100 bases:
>100_bases GGGGATTGCACAAATGTAGGCGATTGACCCGAAAGTCAATCGGTTCGGACGGCCAGGACACTCGCCACCAGAGGACAAGC CGACTAGATACCGGCCCTCC
Downstream 100 bases:
>100_bases GGACGCGCGAGCAGGACGGGACTACTTCGAGGCCGCCGCGTTCAGGCGCTTCTCCGACAGGGCGAGGTACTTCTCGTCCA TGTCGATGCCCACGTAACGG
Product: M1 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MARLDPHSYNDSTQPETETLDWRARVDFKTQRLHAEVTHTLKEASAGPLDLDTRDLEIRDVIDAAGRPLPYILSPSEPIL GSRLRIELPVGLRQFTVRYRTAPHASALQWLTPSQTAGGKHPFLYSQCQAIHARSVVPLQDTPRIRIRYTASLRIPKALK AVMAASFLRREEHGVEAEEHYEMPQPVPPYLLAFAVGSLAPKELGPRSRVWAEPELLEDAAEEFSGVDDMLRAAESLFGP YDWERFDLLTMPPSFPYGGMENPRLTFLTPTLITGDKSLVNVVAHELAHSWTGNLVTNASAEHFWLNEGFTVFAERRILE VLEGPEVSALHGALGRRALDSALQHFRAHPQLTSLRTHLAGVDPDEAFSQIPYEKGYLLLRAMEDAAGRPAFDEFLRRYL ATYRFRALTTEEFVAFAEKELPGVLTKVDAEAYLHRPGVPPGAPSPRSLRLEAMDALRGKVPTPEQAKDWTPAEWQLYLE SLPWDIPRDVIQQLDARFSLTESRNSEVLVAWLVVALRADWEPAVARTETFLGEVGRMKYLKPLYGVLSASHAHRSLARA LFKKHGERYHPIARQGVELILSRA
Sequences:
>Translated_584_residues MARLDPHSYNDSTQPETETLDWRARVDFKTQRLHAEVTHTLKEASAGPLDLDTRDLEIRDVIDAAGRPLPYILSPSEPIL GSRLRIELPVGLRQFTVRYRTAPHASALQWLTPSQTAGGKHPFLYSQCQAIHARSVVPLQDTPRIRIRYTASLRIPKALK AVMAASFLRREEHGVEAEEHYEMPQPVPPYLLAFAVGSLAPKELGPRSRVWAEPELLEDAAEEFSGVDDMLRAAESLFGP YDWERFDLLTMPPSFPYGGMENPRLTFLTPTLITGDKSLVNVVAHELAHSWTGNLVTNASAEHFWLNEGFTVFAERRILE VLEGPEVSALHGALGRRALDSALQHFRAHPQLTSLRTHLAGVDPDEAFSQIPYEKGYLLLRAMEDAAGRPAFDEFLRRYL ATYRFRALTTEEFVAFAEKELPGVLTKVDAEAYLHRPGVPPGAPSPRSLRLEAMDALRGKVPTPEQAKDWTPAEWQLYLE SLPWDIPRDVIQQLDARFSLTESRNSEVLVAWLVVALRADWEPAVARTETFLGEVGRMKYLKPLYGVLSASHAHRSLARA LFKKHGERYHPIARQGVELILSRA >Mature_583_residues ARLDPHSYNDSTQPETETLDWRARVDFKTQRLHAEVTHTLKEASAGPLDLDTRDLEIRDVIDAAGRPLPYILSPSEPILG SRLRIELPVGLRQFTVRYRTAPHASALQWLTPSQTAGGKHPFLYSQCQAIHARSVVPLQDTPRIRIRYTASLRIPKALKA VMAASFLRREEHGVEAEEHYEMPQPVPPYLLAFAVGSLAPKELGPRSRVWAEPELLEDAAEEFSGVDDMLRAAESLFGPY DWERFDLLTMPPSFPYGGMENPRLTFLTPTLITGDKSLVNVVAHELAHSWTGNLVTNASAEHFWLNEGFTVFAERRILEV LEGPEVSALHGALGRRALDSALQHFRAHPQLTSLRTHLAGVDPDEAFSQIPYEKGYLLLRAMEDAAGRPAFDEFLRRYLA TYRFRALTTEEFVAFAEKELPGVLTKVDAEAYLHRPGVPPGAPSPRSLRLEAMDALRGKVPTPEQAKDWTPAEWQLYLES LPWDIPRDVIQQLDARFSLTESRNSEVLVAWLVVALRADWEPAVARTETFLGEVGRMKYLKPLYGVLSASHAHRSLARAL FKKHGERYHPIARQGVELILSRA
Specific function: Preferentially acts as a leucyl-aminopeptidase, although it also has activity against other substrates [H]
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M1 family [H]
Homologues:
Organism=Homo sapiens, GI4505029, Length=589, Percent_Identity=38.5398981324278, Blast_Score=394, Evalue=1e-109, Organism=Homo sapiens, GI40316915, Length=554, Percent_Identity=35.7400722021661, Blast_Score=333, Evalue=4e-91, Organism=Homo sapiens, GI54020718, Length=441, Percent_Identity=34.9206349206349, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI300934738, Length=411, Percent_Identity=22.8710462287105, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI132814467, Length=352, Percent_Identity=26.1363636363636, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI61742777, Length=322, Percent_Identity=27.639751552795, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI61742775, Length=322, Percent_Identity=27.639751552795, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI158937236, Length=315, Percent_Identity=29.5238095238095, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI7019561, Length=339, Percent_Identity=24.4837758112094, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI94818891, Length=318, Percent_Identity=26.4150943396226, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI94818901, Length=318, Percent_Identity=26.4150943396226, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI310123622, Length=308, Percent_Identity=30.1948051948052, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI194239713, Length=365, Percent_Identity=22.4657534246575, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI157266300, Length=309, Percent_Identity=27.831715210356, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI310133497, Length=308, Percent_Identity=29.8701298701299, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI300934744, Length=379, Percent_Identity=22.6912928759894, Blast_Score=73, Evalue=8e-13, Organism=Escherichia coli, GI1787163, Length=316, Percent_Identity=23.7341772151899, Blast_Score=72, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17544504, Length=605, Percent_Identity=35.2066115702479, Blast_Score=365, Evalue=1e-101, Organism=Caenorhabditis elegans, GI71984339, Length=611, Percent_Identity=37.315875613748, Blast_Score=363, Evalue=1e-100, Organism=Caenorhabditis elegans, GI71984353, Length=611, Percent_Identity=37.315875613748, Blast_Score=360, Evalue=1e-100, Organism=Caenorhabditis elegans, GI17569225, Length=303, Percent_Identity=26.4026402640264, Blast_Score=92, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17569221, Length=310, Percent_Identity=26.7741935483871, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17565628, Length=315, Percent_Identity=26.3492063492064, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115533278, Length=435, Percent_Identity=23.448275862069, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI115533276, Length=435, Percent_Identity=23.448275862069, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71989076, Length=464, Percent_Identity=25.2155172413793, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71989071, Length=464, Percent_Identity=25.2155172413793, Blast_Score=76, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193206928, Length=318, Percent_Identity=25.4716981132075, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193206926, Length=318, Percent_Identity=25.4716981132075, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324283, Length=606, Percent_Identity=34.1584158415842, Blast_Score=318, Evalue=2e-87, Organism=Drosophila melanogaster, GI24585062, Length=581, Percent_Identity=37.6936316695353, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI24585064, Length=581, Percent_Identity=37.6936316695353, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI24585066, Length=581, Percent_Identity=37.6936316695353, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI45550350, Length=581, Percent_Identity=37.6936316695353, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI24646514, Length=328, Percent_Identity=27.1341463414634, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI28571901, Length=348, Percent_Identity=25.5747126436782, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI161078673, Length=348, Percent_Identity=25.5747126436782, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24650973, Length=325, Percent_Identity=25.5384615384615, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI45550850, Length=325, Percent_Identity=25.5384615384615, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24646516, Length=314, Percent_Identity=28.0254777070064, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24646518, Length=314, Percent_Identity=28.0254777070064, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI21358341, Length=306, Percent_Identity=30.0653594771242, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI221379089, Length=326, Percent_Identity=26.9938650306748, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24651025, Length=370, Percent_Identity=27.8378378378378, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24651023, Length=370, Percent_Identity=27.8378378378378, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24651021, Length=370, Percent_Identity=27.8378378378378, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646510, Length=345, Percent_Identity=23.768115942029, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24646512, Length=345, Percent_Identity=23.768115942029, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI221458256, Length=304, Percent_Identity=25.3289473684211, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI281362224, Length=304, Percent_Identity=25.3289473684211, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24651016, Length=246, Percent_Identity=30.4878048780488, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24648790, Length=301, Percent_Identity=24.9169435215947, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24655257, Length=310, Percent_Identity=26.4516129032258, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24655274, Length=310, Percent_Identity=26.4516129032258, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24655260, Length=310, Percent_Identity=26.4516129032258, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24655265, Length=310, Percent_Identity=26.4516129032258, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24655268, Length=310, Percent_Identity=26.4516129032258, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24655252, Length=310, Percent_Identity=26.4516129032258, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001930 - InterPro: IPR014782 [H]
Pfam domain/function: PF01433 Peptidase_M1 [H]
EC number: =3.4.11.1 [H]
Molecular weight: Translated: 65736; Mature: 65604
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLDPHSYNDSTQPETETLDWRARVDFKTQRLHAEVTHTLKEASAGPLDLDTRDLEIRD CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH VIDAAGRPLPYILSPSEPILGSRLRIELPVGLRQFTVRYRTAPHASALQWLTPSQTAGGK HHHHCCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCC HPFLYSQCQAIHARSVVPLQDTPRIRIRYTASLRIPKALKAVMAASFLRREEHGVEAEEH CCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHH YEMPQPVPPYLLAFAVGSLAPKELGPRSRVWAEPELLEDAAEEFSGVDDMLRAAESLFGP CCCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC YDWERFDLLTMPPSFPYGGMENPRLTFLTPTLITGDKSLVNVVAHELAHSWTGNLVTNAS CCCCCEEEEECCCCCCCCCCCCCEEEEEECEEECCCHHHHHHHHHHHHHHHCCCEEECCC AEHFWLNEGFTVFAERRILEVLEGPEVSALHGALGRRALDSALQHFRAHPQLTSLRTHLA CCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GVDPDEAFSQIPYEKGYLLLRAMEDAAGRPAFDEFLRRYLATYRFRALTTEEFVAFAEKE CCCHHHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LPGVLTKVDAEAYLHRPGVPPGAPSPRSLRLEAMDALRGKVPTPEQAKDWTPAEWQLYLE CCHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH SLPWDIPRDVIQQLDARFSLTESRNSEVLVAWLVVALRADWEPAVARTETFLGEVGRMKY HCCCCCCHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LKPLYGVLSASHAHRSLARALFKKHGERYHPIARQGVELILSRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ARLDPHSYNDSTQPETETLDWRARVDFKTQRLHAEVTHTLKEASAGPLDLDTRDLEIRD CCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH VIDAAGRPLPYILSPSEPILGSRLRIELPVGLRQFTVRYRTAPHASALQWLTPSQTAGGK HHHHCCCCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHCCCCCCCCCCC HPFLYSQCQAIHARSVVPLQDTPRIRIRYTASLRIPKALKAVMAASFLRREEHGVEAEEH CCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHH YEMPQPVPPYLLAFAVGSLAPKELGPRSRVWAEPELLEDAAEEFSGVDDMLRAAESLFGP CCCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCC YDWERFDLLTMPPSFPYGGMENPRLTFLTPTLITGDKSLVNVVAHELAHSWTGNLVTNAS CCCCCEEEEECCCCCCCCCCCCCEEEEEECEEECCCHHHHHHHHHHHHHHHCCCEEECCC AEHFWLNEGFTVFAERRILEVLEGPEVSALHGALGRRALDSALQHFRAHPQLTSLRTHLA CCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC GVDPDEAFSQIPYEKGYLLLRAMEDAAGRPAFDEFLRRYLATYRFRALTTEEFVAFAEKE CCCHHHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LPGVLTKVDAEAYLHRPGVPPGAPSPRSLRLEAMDALRGKVPTPEQAKDWTPAEWQLYLE CCHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH SLPWDIPRDVIQQLDARFSLTESRNSEVLVAWLVVALRADWEPAVARTETFLGEVGRMKY HCCCCCCHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LKPLYGVLSASHAHRSLARALFKKHGERYHPIARQGVELILSRA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9723917; 8899719; 11427726 [H]