| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is myrA [H]
Identifier: 108757061
GI number: 108757061
Start: 6299445
End: 6300338
Strand: Direct
Name: myrA [H]
Synonym: MXAN_5038
Alternate gene names: 108757061
Gene position: 6299445-6300338 (Clockwise)
Preceding gene: 108762976
Following gene: 108761291
Centisome position: 68.92
GC content: 69.8
Gene sequence:
>894_bases ATGTCAGCGCCCGCTTCGCCCCGCTTTCCGCCGCCCCTTCTTCCACTGCTCTGCTGCCCCATCTGCCAGTCACCGCTTCG CCAGGAAGCAACGGCGCTGCGCTGTGTGGCGCGCCATGGCTTCGACGTCGCCAGACAGGGCTATGTCAACCTCCTGCCGG GCCACCGGGCCCCGGGCAATGCCGACACCCAGTCGATGGTCGCCGCGCGAGAGACATTCCTCGCGCGAGGCCACTACGAA CCGTTGGCCGCGCTATTGGCGGAGCATGCCGCGCGGCTCACCGGCGCCGATGCCACAGAGGGCTGCGTGCTCGATGTGGG AGCGGGTACCGGGCACTACCTGGCCCGTGTCCTCGACCGGTGCCCGGCGCTGACGGGGCTCGCCATCGACATCTCCCGCT TCGCTGCCCGCCGGGCCGCTAGGGCCCACGCCCGCGCGGGAGCCCTCATCGCGGACGGCGAGCGGACGTTGCCCATCCGA AATCACAGCGTTGCACTGGCGCTCAGCGTCTTCGCTCCTCGCAACGTCACAGAGCTCCACCGCATCCTGAATCGCCGAGG CGCACTGCTCATCGTGACACCCACGGACCAGCACCTGACACAGCTCATCCAACCCATGGGGCTGCTGAGCGTCGACGCGC GAAAGGAGGAGCGGCTCCACACACGGCTGCGGGCCACGTTCAAGCCAGGCGTCCGGGAAGCGCTGGAGCTGACCTTGCGG CTGACGCGCGACGACGCGTTCCACATCGCGGCCATGGGGCCCAGCGCGTTCCATGCATCCACGGAGGAGCTGCGGCGGCG CGCGGACGTGTTGCCCGAGCTCCTCACCGTCAGCGCGTCCTTCACCGTGGCCAGCTACCACCGCGTGGAGAGGAACGGCT CCGCGCCCGCCTGA
Upstream 100 bases:
>100_bases CGGGCGCTCATGCCAGGGTCCTGACACACCCCGCGCCTGAGGGCCTCCCGCGACTCGTTCCCGGCCATGCGCCGCCACGA GCCTCTGGAGCCCTTTCCGC
Downstream 100 bases:
>100_bases GCAGCGCTCGCGCGAGGAGCCCAGACCGCGATGCGCCGCGCGGTCTGGGCCCCTGCCCCGCGCAGGGCATGGGGTTGAAG GCCAGGGAGAAACCCGGCGT
Product: putative ribosomal RNA large subunit methyltransferase A
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSAPASPRFPPPLLPLLCCPICQSPLRQEATALRCVARHGFDVARQGYVNLLPGHRAPGNADTQSMVAARETFLARGHYE PLAALLAEHAARLTGADATEGCVLDVGAGTGHYLARVLDRCPALTGLAIDISRFAARRAARAHARAGALIADGERTLPIR NHSVALALSVFAPRNVTELHRILNRRGALLIVTPTDQHLTQLIQPMGLLSVDARKEERLHTRLRATFKPGVREALELTLR LTRDDAFHIAAMGPSAFHASTEELRRRADVLPELLTVSASFTVASYHRVERNGSAPA
Sequences:
>Translated_297_residues MSAPASPRFPPPLLPLLCCPICQSPLRQEATALRCVARHGFDVARQGYVNLLPGHRAPGNADTQSMVAARETFLARGHYE PLAALLAEHAARLTGADATEGCVLDVGAGTGHYLARVLDRCPALTGLAIDISRFAARRAARAHARAGALIADGERTLPIR NHSVALALSVFAPRNVTELHRILNRRGALLIVTPTDQHLTQLIQPMGLLSVDARKEERLHTRLRATFKPGVREALELTLR LTRDDAFHIAAMGPSAFHASTEELRRRADVLPELLTVSASFTVASYHRVERNGSAPA >Mature_296_residues SAPASPRFPPPLLPLLCCPICQSPLRQEATALRCVARHGFDVARQGYVNLLPGHRAPGNADTQSMVAARETFLARGHYEP LAALLAEHAARLTGADATEGCVLDVGAGTGHYLARVLDRCPALTGLAIDISRFAARRAARAHARAGALIADGERTLPIRN HSVALALSVFAPRNVTELHRILNRRGALLIVTPTDQHLTQLIQPMGLLSVDARKEERLHTRLRATFKPGVREALELTLRL TRDDAFHIAAMGPSAFHASTEELRRRADVLPELLTVSASFTVASYHRVERNGSAPA
Specific function: Confers strong resistance to mycinamicin (MM) and tylosin (TY). May function as methyltransferase [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RlmA family [H]
Homologues:
Organism=Escherichia coli, GI1788125, Length=275, Percent_Identity=31.6363636363636, Blast_Score=124, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR016718 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 32139; Mature: 32008
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPASPRFPPPLLPLLCCPICQSPLRQEATALRCVARHGFDVARQGYVNLLPGHRAPGN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEECCCCCCCCC ADTQSMVAARETFLARGHYEPLAALLAEHAARLTGADATEGCVLDVGAGTGHYLARVLDR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH CPALTGLAIDISRFAARRAARAHARAGALIADGERTLPIRNHSVALALSVFAPRNVTELH CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCCCCHHHHH RILNRRGALLIVTPTDQHLTQLIQPMGLLSVDARKEERLHTRLRATFKPGVREALELTLR HHHHCCCCEEEEECCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHH LTRDDAFHIAAMGPSAFHASTEELRRRADVLPELLTVSASFTVASYHRVERNGSAPA EECCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SAPASPRFPPPLLPLLCCPICQSPLRQEATALRCVARHGFDVARQGYVNLLPGHRAPGN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEECCCCCCCCC ADTQSMVAARETFLARGHYEPLAALLAEHAARLTGADATEGCVLDVGAGTGHYLARVLDR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHH CPALTGLAIDISRFAARRAARAHARAGALIADGERTLPIRNHSVALALSVFAPRNVTELH CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCCCCHHHHH RILNRRGALLIVTPTDQHLTQLIQPMGLLSVDARKEERLHTRLRATFKPGVREALELTLR HHHHCCCCEEEEECCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHH LTRDDAFHIAAMGPSAFHASTEELRRRADVLPELLTVSASFTVASYHRVERNGSAPA EECCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8163173 [H]