| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108756837
Identifier: 108756837
GI number: 108756837
Start: 2391850
End: 2393556
Strand: Reverse
Name: 108756837
Synonym: MXAN_2061
Alternate gene names: NA
Gene position: 2393556-2391850 (Counterclockwise)
Preceding gene: 108761870
Following gene: 108757992
Centisome position: 26.19
GC content: 68.42
Gene sequence:
>1707_bases GTGCGCCTGTTCAAAGCCATCCTCCTGTTGATGCTGGTGGTGGGCGTCGTCCCCACGCTGATGGTGGGGTGGCTCTCCGT CTCCCACACCCGGGAGCTCCTGGTGCGCGACGCCCAGGAACTGGCACAGGAGCGCGTGAAGCAGCTGCGCCTCAAGGCCG AAATCTTCCTCGGCGAGCCCACCGACGCGGTGCTGGGCCTGGCCCGCGTGCCCGGCTTCTTCGGCCTGCCATTGGAAGCG CAGCAGACACACCTGGCCTCGGTGCTCAACCAGCGGCGCGATGTGCTGGCGCTCACCGTGTTCGACGCCAACCGCCAGCG GCTGCCGGGACTCCAGGCCTTCTCCAAGCACGACGTGCCGCCCACCGCGCTGGCCGGGCATGAGGAGCGCGCGCGGGCGC TGCTCGAGAACATCGAGGGCGTGCGCTACGCGGACGTGGTGAAGGACCCGCAGGGTAGCGAGCCGGTGCTGACGCTGGCC TTCCCGCTGGGCGAGCCCGTCCGGGGGTACATCGCGGCGGACCTGTCCCTGGCCGACCTGCGGAAGATGCTGGAGCAGGA GCGCGTGGGCAGCACCGGCTTCGCGTATCTGGCGGACCGTCACGGTCACCTCGTGGCGGGCGGTGGCGGCGTCGCCGGCC TGGGCGAGGACGTGGCGCAGCGCGGCCCGGTGGCGCACCTGCTGAAGCAGTTGGTGGGCAAGTCGGACATGGAGCTGTTC CACGTCGGCAACTTCGGCGAGGGCCGGGACGCGGTGGTGGCCGCGTACACGGTGCTGCCCGAGACGGGCTGGGCCATCGT CTCCGAGCAACCCGTGGAGCACGCCTACCGTCAGGTGGACACCATGGAACAGCGCATCCTCCTGGGTTTGGGGGCGGCCA TCCTGGTGGCGGTGGTGCTGGCGGCGCTCTTCTCGCGGAACCTCACCCGGCCGCTCAAGGGATTCATCAGCGGCGCGCTG GAGCTGGCACACGGCAAGTTCGGCGTCGAGGTGGACATCAAGCAGAAGAACGAGCTGGGCGAGCTGGCGCAGACGTTCAA CTACATGAGCAAGCAGCTGCTCGCGTACGACATGGAGAACCGCGGCCTCTACGAGAGCCTGGAGAAGGGCTACCTGGAGA CCATCGTCGCGCTGGCGAACTCCATCGATTCGAAGGACGCGTACACCCGTGGCCACAGCCAGCGCGTGGGCGACGTCTCG GTGCAGATTGGCCGGGAGATGAAGCTCACCGAGCGCGAGCTGCGGCAGTTGCAGTACGGCGGCATCCTCCACGACATCGG GAAGATTGGCATCGTGGAGTCCATCCTCTGCAAGCAGACGCGGCTGACGGACCAGGAGATGGACATCATGCGCGAGCACC CCGCCATCGGTGACGCCATCATCGGTCCGGTGAGCTTCCTGGGCGCGGTGCGCGCGTGCGTCCGCCACCACCATGAGCGC TGGGACGGCACCGGCTACCCGGACAAGCTCAAGGGCGAGGACATTCCCCTGCTGGCCCGCATCGTCGCGTGTGCGGATAC CTTCGACGCCTGCACCTCCACCCGCCCGTACCAGAAGGCCATGCCGCTGGAGAAGGCGATGGAAATCCTCGACAACCTCA GCGGCGCCCAGTTGGACCCGAAGGTCGTCCAGGCCCTGAAGCAGGTGCTGGCGAAGCAGGGCGTGCGGCTGGAGGGCCAC CGGCTGCCCGTGAAGCTCGCCTCCTGA
Upstream 100 bases:
>100_bases TCCGAGCCCAGCGCGCCCAGGCACTTCGAGCTGGTGTCCGAGCGCCTCAAACTCGAAGTGAAGAAGGGCCAGTGGCAGTA ACCCCTGGAGGAGCCACGCC
Downstream 100 bases:
>100_bases CGGCCGAAGGATGGTAGGGAGGGCGCAAGACTGTTGAGACTCTGGAAGGTGAAACGTTGAGCTTCTGGGACCGCATCAAG CCCGCCCCCCCAGCCGTCAC
Product: HAMP domain/HD domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MRLFKAILLLMLVVGVVPTLMVGWLSVSHTRELLVRDAQELAQERVKQLRLKAEIFLGEPTDAVLGLARVPGFFGLPLEA QQTHLASVLNQRRDVLALTVFDANRQRLPGLQAFSKHDVPPTALAGHEERARALLENIEGVRYADVVKDPQGSEPVLTLA FPLGEPVRGYIAADLSLADLRKMLEQERVGSTGFAYLADRHGHLVAGGGGVAGLGEDVAQRGPVAHLLKQLVGKSDMELF HVGNFGEGRDAVVAAYTVLPETGWAIVSEQPVEHAYRQVDTMEQRILLGLGAAILVAVVLAALFSRNLTRPLKGFISGAL ELAHGKFGVEVDIKQKNELGELAQTFNYMSKQLLAYDMENRGLYESLEKGYLETIVALANSIDSKDAYTRGHSQRVGDVS VQIGREMKLTERELRQLQYGGILHDIGKIGIVESILCKQTRLTDQEMDIMREHPAIGDAIIGPVSFLGAVRACVRHHHER WDGTGYPDKLKGEDIPLLARIVACADTFDACTSTRPYQKAMPLEKAMEILDNLSGAQLDPKVVQALKQVLAKQGVRLEGH RLPVKLAS
Sequences:
>Translated_568_residues MRLFKAILLLMLVVGVVPTLMVGWLSVSHTRELLVRDAQELAQERVKQLRLKAEIFLGEPTDAVLGLARVPGFFGLPLEA QQTHLASVLNQRRDVLALTVFDANRQRLPGLQAFSKHDVPPTALAGHEERARALLENIEGVRYADVVKDPQGSEPVLTLA FPLGEPVRGYIAADLSLADLRKMLEQERVGSTGFAYLADRHGHLVAGGGGVAGLGEDVAQRGPVAHLLKQLVGKSDMELF HVGNFGEGRDAVVAAYTVLPETGWAIVSEQPVEHAYRQVDTMEQRILLGLGAAILVAVVLAALFSRNLTRPLKGFISGAL ELAHGKFGVEVDIKQKNELGELAQTFNYMSKQLLAYDMENRGLYESLEKGYLETIVALANSIDSKDAYTRGHSQRVGDVS VQIGREMKLTERELRQLQYGGILHDIGKIGIVESILCKQTRLTDQEMDIMREHPAIGDAIIGPVSFLGAVRACVRHHHER WDGTGYPDKLKGEDIPLLARIVACADTFDACTSTRPYQKAMPLEKAMEILDNLSGAQLDPKVVQALKQVLAKQGVRLEGH RLPVKLAS >Mature_568_residues MRLFKAILLLMLVVGVVPTLMVGWLSVSHTRELLVRDAQELAQERVKQLRLKAEIFLGEPTDAVLGLARVPGFFGLPLEA QQTHLASVLNQRRDVLALTVFDANRQRLPGLQAFSKHDVPPTALAGHEERARALLENIEGVRYADVVKDPQGSEPVLTLA FPLGEPVRGYIAADLSLADLRKMLEQERVGSTGFAYLADRHGHLVAGGGGVAGLGEDVAQRGPVAHLLKQLVGKSDMELF HVGNFGEGRDAVVAAYTVLPETGWAIVSEQPVEHAYRQVDTMEQRILLGLGAAILVAVVLAALFSRNLTRPLKGFISGAL ELAHGKFGVEVDIKQKNELGELAQTFNYMSKQLLAYDMENRGLYESLEKGYLETIVALANSIDSKDAYTRGHSQRVGDVS VQIGREMKLTERELRQLQYGGILHDIGKIGIVESILCKQTRLTDQEMDIMREHPAIGDAIIGPVSFLGAVRACVRHHHER WDGTGYPDKLKGEDIPLLARIVACADTFDACTSTRPYQKAMPLEKAMEILDNLSGAQLDPKVVQALKQVLAKQGVRLEGH RLPVKLAS
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62235; Mature: 62235
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFKAILLLMLVVGVVPTLMVGWLSVSHTRELLVRDAQELAQERVKQLRLKAEIFLGEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC TDAVLGLARVPGFFGLPLEAQQTHLASVLNQRRDVLALTVFDANRQRLPGLQAFSKHDVP HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHCCCHHHHHCCCCC PTALAGHEERARALLENIEGVRYADVVKDPQGSEPVLTLAFPLGEPVRGYIAADLSLADL CHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHH RKMLEQERVGSTGFAYLADRHGHLVAGGGGVAGLGEDVAQRGPVAHLLKQLVGKSDMELF HHHHHHHHCCCCCHHHEECCCCEEEECCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEE HVGNFGEGRDAVVAAYTVLPETGWAIVSEQPVEHAYRQVDTMEQRILLGLGAAILVAVVL ECCCCCCCCCHHEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALFSRNLTRPLKGFISGALELAHGKFGVEVDIKQKNELGELAQTFNYMSKQLLAYDMEN HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC RGLYESLEKGYLETIVALANSIDSKDAYTRGHSQRVGDVSVQIGREMKLTERELRQLQYG CCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHC GILHDIGKIGIVESILCKQTRLTDQEMDIMREHPAIGDAIIGPVSFLGAVRACVRHHHER CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH WDGTGYPDKLKGEDIPLLARIVACADTFDACTSTRPYQKAMPLEKAMEILDNLSGAQLDP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCH KVVQALKQVLAKQGVRLEGHRLPVKLAS HHHHHHHHHHHHCCCEECCCCCCEEECC >Mature Secondary Structure MRLFKAILLLMLVVGVVPTLMVGWLSVSHTRELLVRDAQELAQERVKQLRLKAEIFLGEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC TDAVLGLARVPGFFGLPLEAQQTHLASVLNQRRDVLALTVFDANRQRLPGLQAFSKHDVP HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHCCCHHHHHCCCCC PTALAGHEERARALLENIEGVRYADVVKDPQGSEPVLTLAFPLGEPVRGYIAADLSLADL CHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHCCCHHHH RKMLEQERVGSTGFAYLADRHGHLVAGGGGVAGLGEDVAQRGPVAHLLKQLVGKSDMELF HHHHHHHHCCCCCHHHEECCCCEEEECCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEE HVGNFGEGRDAVVAAYTVLPETGWAIVSEQPVEHAYRQVDTMEQRILLGLGAAILVAVVL ECCCCCCCCCHHEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALFSRNLTRPLKGFISGALELAHGKFGVEVDIKQKNELGELAQTFNYMSKQLLAYDMEN HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCC RGLYESLEKGYLETIVALANSIDSKDAYTRGHSQRVGDVSVQIGREMKLTERELRQLQYG CCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHC GILHDIGKIGIVESILCKQTRLTDQEMDIMREHPAIGDAIIGPVSFLGAVRACVRHHHER CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH WDGTGYPDKLKGEDIPLLARIVACADTFDACTSTRPYQKAMPLEKAMEILDNLSGAQLDP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHCCCCCCCCH KVVQALKQVLAKQGVRLEGHRLPVKLAS HHHHHHHHHHHHCCCEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]