| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108761870
Identifier: 108761870
GI number: 108761870
Start: 2393576
End: 2394472
Strand: Reverse
Name: 108761870
Synonym: MXAN_2062
Alternate gene names: NA
Gene position: 2394472-2393576 (Counterclockwise)
Preceding gene: 108758996
Following gene: 108756837
Centisome position: 26.2
GC content: 72.13
Gene sequence:
>897_bases ATGAAGGCGGCGCTCCTCCTCCTCACATGGCTGGGCACGACGCCCCCGGGCACCGTGGTGGTGGGCCCCAACGAATCCCT GCGCCAGGTGGCCCAGCGCACCCTGGGCGACGCGCGCGCCGCGGAGGAACTGCGCGCACTCAACGGACTTTCCTCGGACG ACGTGGCGGCGGGGACCCGGCTGAAGGTGCCCGGCCACGAGCGCGTGCTGGCGCAGAAGGCCCTGGAGACGGCGCGCACG CTGGTGGCCAGCTCGAAGGATGCGAGCGTCCCCCCAGCGGCCTCCTCCCGGCTGAAGGTCGCGGAGTCCCATTTCCGCGA GGCGCGCTACACGCAGGCGGCCTCGGAGGCCAATGCCGTGGGGAAGCTGGTGGCGGCAGACCGCTCGCCGCAGTCCTCCG CGTTCACCGTGGAAGTGGGCGACGGCGACAGCACCACCGTCACCGTGAAGCACGGCCCGCCGGTCCGCGTGGAGGCCGAG GGCGTCGCCCAGCCCGTCGCCAAGGGTGAATCCATCCGCGTGGAGAAGGGCCATCCGCCCCCCGCGCCCCTTCGACCGCT GGTGGCCCCCAGCCCCGGGCAGCCGGAGGATTCCGCGCGCCTGAAGCGACGCCCCGACCGGGACGGGCACCTGGGCCCGG TGAAGCTGACCTGGGAGGCTGTACGGGGCGCGGAACGTTATGAAGTGGAAGTGTCGCGCGCGCAGGAGCAACGCGCCGTC TTCACGCAGACAGTCACCAGCCTGGAAGCGAAGCTGCCAGTGCTACCCGCGGGAAGCTACCGGTGGACGGTGCGCGCGGT GGGCCCCGCGGGTCCGTCCGAGCCCAGCGCGCCCAGGCACTTCGAGCTGGTGTCCGAGCGCCTCAAACTCGAAGTGAAGA AGGGCCAGTGGCAGTAA
Upstream 100 bases:
>100_bases GGGGCCGCATCGACGCGGAGCTGGAGAAGCCCGCCACCCAGTCCCTGTCCGTCACCACGCCGTCCGCCACCATCCAGGCG GGAAGGGAGATTGTCTTCCA
Downstream 100 bases:
>100_bases CCCCTGGAGGAGCCACGCCGTGCGCCTGTTCAAAGCCATCCTCCTGTTGATGCTGGTGGTGGGCGTCGTCCCCACGCTGA TGGTGGGGTGGCTCTCCGTC
Product: LysM domain-containing protein
Products: NA
Alternate protein names: Lysm Domain Protein
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKAALLLLTWLGTTPPGTVVVGPNESLRQVAQRTLGDARAAEELRALNGLSSDDVAAGTRLKVPGHERVLAQKALETART LVASSKDASVPPAASSRLKVAESHFREARYTQAASEANAVGKLVAADRSPQSSAFTVEVGDGDSTTVTVKHGPPVRVEAE GVAQPVAKGESIRVEKGHPPPAPLRPLVAPSPGQPEDSARLKRRPDRDGHLGPVKLTWEAVRGAERYEVEVSRAQEQRAV FTQTVTSLEAKLPVLPAGSYRWTVRAVGPAGPSEPSAPRHFELVSERLKLEVKKGQWQ
Sequences:
>Translated_298_residues MKAALLLLTWLGTTPPGTVVVGPNESLRQVAQRTLGDARAAEELRALNGLSSDDVAAGTRLKVPGHERVLAQKALETART LVASSKDASVPPAASSRLKVAESHFREARYTQAASEANAVGKLVAADRSPQSSAFTVEVGDGDSTTVTVKHGPPVRVEAE GVAQPVAKGESIRVEKGHPPPAPLRPLVAPSPGQPEDSARLKRRPDRDGHLGPVKLTWEAVRGAERYEVEVSRAQEQRAV FTQTVTSLEAKLPVLPAGSYRWTVRAVGPAGPSEPSAPRHFELVSERLKLEVKKGQWQ >Mature_298_residues MKAALLLLTWLGTTPPGTVVVGPNESLRQVAQRTLGDARAAEELRALNGLSSDDVAAGTRLKVPGHERVLAQKALETART LVASSKDASVPPAASSRLKVAESHFREARYTQAASEANAVGKLVAADRSPQSSAFTVEVGDGDSTTVTVKHGPPVRVEAE GVAQPVAKGESIRVEKGHPPPAPLRPLVAPSPGQPEDSARLKRRPDRDGHLGPVKLTWEAVRGAERYEVEVSRAQEQRAV FTQTVTSLEAKLPVLPAGSYRWTVRAVGPAGPSEPSAPRHFELVSERLKLEVKKGQWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31794; Mature: 31794
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAALLLLTWLGTTPPGTVVVGPNESLRQVAQRTLGDARAAEELRALNGLSSDDVAAGTR CCHHEEEEEHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE LKVPGHERVLAQKALETARTLVASSKDASVPPAASSRLKVAESHFREARYTQAASEANAV EECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GKLVAADRSPQSSAFTVEVGDGDSTTVTVKHGPPVRVEAEGVAQPVAKGESIRVEKGHPP HHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCHHHHHHCCCEEEEECCCCC PAPLRPLVAPSPGQPEDSARLKRRPDRDGHLGPVKLTWEAVRGAERYEVEVSRAQEQRAV CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEHHHHCCCHHEEEEHHHHHHHHHH FTQTVTSLEAKLPVLPAGSYRWTVRAVGPAGPSEPSAPRHFELVSERLKLEVKKGQWQ HHHHHHHHHHCCCEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MKAALLLLTWLGTTPPGTVVVGPNESLRQVAQRTLGDARAAEELRALNGLSSDDVAAGTR CCHHEEEEEHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE LKVPGHERVLAQKALETARTLVASSKDASVPPAASSRLKVAESHFREARYTQAASEANAV EECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GKLVAADRSPQSSAFTVEVGDGDSTTVTVKHGPPVRVEAEGVAQPVAKGESIRVEKGHPP HHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCHHHHHHCCCEEEEECCCCC PAPLRPLVAPSPGQPEDSARLKRRPDRDGHLGPVKLTWEAVRGAERYEVEVSRAQEQRAV CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEHHHHCCCHHEEEEHHHHHHHHHH FTQTVTSLEAKLPVLPAGSYRWTVRAVGPAGPSEPSAPRHFELVSERLKLEVKKGQWQ HHHHHHHHHHCCCEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA