Click here to switch to the map view.

The map label for this gene is 108563942

Identifier: 108563942

GI number: 108563942

Start: 1581390

End: 1581947

Strand: Reverse

Name: 108563942

Synonym: HPAG1_1517

Alternate gene names: NA

Gene position: 1581947-1581390 (Counterclockwise)

Preceding gene: 108563943

Following gene: 108563941

Centisome position: 99.1

GC content: 39.78

Gene sequence:

>558_bases
ATGCGTTGGTGGTGTTTTTTGGTGTGTTGTTTTGGTATTTTAAGCGTGATGGATGCTAAAAAATTAGAGAATAAAGGTTT
GAAAAAAGAAAGAGAGCTTTTAGAGATTACCGGCAACCAATTTGTAGCGAACGACAAAACCAAAACCGCCGTTATTCAAG
GCAATGTGCAGATCAAAAAGGGTAAAGATCGGTTGTTTGCGGATAAGGTGAGCGTGTTTTTAAACGATAAACGAAAGCCA
GAGCGCTATGAAGCCACAGGGAACACGCATTTTAACATCTTTACAGAGGATAATCGTGAAATCAGCGGGAGTGCTGACAA
GCTCATTTATAACGCGCTGAATGGGGAATACAAATTATTGCAAAATGCGGTGGTTAGAGAAGTGGGGAAATCTAATGTCA
TTACCGGCGATGAAATTATTTTAAACAAAACTAAGGGTTATGCGGACGTGTTGGGGAGCGCGAAACGGCCCGCTAAATTT
GTGTTTGATATGGAAGATATTAATGAAGAAAATCGTAAAGCTAAATTGAAGAAGAAAGGCGCTAAGGAAAAACCATGA

Upstream 100 bases:

>100_bases
TTATTGAAGCTCAAAGCATTCAAGCCAATTTGTTTCTAGATGAAATCAAACAAAGCCAAAAAGAAAAGAAAAAACTCCCC
ACTTTCAAAGGAGGATTTTA

Downstream 100 bases:

>100_bases
TTGTCATTAAAGACGCTCATTTTCTCACTTCTTCTAGCCAACTTTTTCAGTGCCCTGCGAGCTTAACTTCTGAGATGGTC
ATTTTAGGGCGCAGTAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Envelope Biogenesis Protein YhbN; Lipopolysaccharide Transport Periplasmic Protein LptA; OstA-Like Protein

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRWWCFLVCCFGILSVMDAKKLENKGLKKERELLEITGNQFVANDKTKTAVIQGNVQIKKGKDRLFADKVSVFLNDKRKP
ERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLLQNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKF
VFDMEDINEENRKAKLKKKGAKEKP

Sequences:

>Translated_185_residues
MRWWCFLVCCFGILSVMDAKKLENKGLKKERELLEITGNQFVANDKTKTAVIQGNVQIKKGKDRLFADKVSVFLNDKRKP
ERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLLQNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKF
VFDMEDINEENRKAKLKKKGAKEKP
>Mature_185_residues
MRWWCFLVCCFGILSVMDAKKLENKGLKKERELLEITGNQFVANDKTKTAVIQGNVQIKKGKDRLFADKVSVFLNDKRKP
ERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLLQNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKF
VFDMEDINEENRKAKLKKKGAKEKP

Specific function: Unknown

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21020; Mature: 21020

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWWCFLVCCFGILSVMDAKKLENKGLKKERELLEITGNQFVANDKTKTAVIQGNVQIKK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEC
GKDRLFADKVSVFLNDKRKPERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLL
CCCHHHHHHHHHEECCCCCCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHH
QNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKFVFDMEDINEENRKAKLKKKG
HHHHHHHHCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEEEEEHHHCCCHHHHHHHHHCC
AKEKP
CCCCC
>Mature Secondary Structure
MRWWCFLVCCFGILSVMDAKKLENKGLKKERELLEITGNQFVANDKTKTAVIQGNVQIKK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEC
GKDRLFADKVSVFLNDKRKPERYEATGNTHFNIFTEDNREISGSADKLIYNALNGEYKLL
CCCHHHHHHHHHEECCCCCCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHHH
QNAVVREVGKSNVITGDEIILNKTKGYADVLGSAKRPAKFVFDMEDINEENRKAKLKKKG
HHHHHHHHCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEEEEEHHHCCCHHHHHHHHHCC
AKEKP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA