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The map label for this gene is 108563912

Identifier: 108563912

GI number: 108563912

Start: 1547040

End: 1547897

Strand: Reverse

Name: 108563912

Synonym: HPAG1_1487

Alternate gene names: NA

Gene position: 1547897-1547040 (Counterclockwise)

Preceding gene: 108563913

Following gene: 108563907

Centisome position: 96.96

GC content: 43.59

Gene sequence:

>858_bases
ATGAAAGAGTTTAAGATTCTCATTATCCTCATTGTGGTGGTAGGCGTGATTTATTATGGGGTTGAGCCTTATGCGCATTC
GGTGATGCACCCTAAAGTCGCTCCGGCGGATTTTGCTTTCAAGGATTTAGAGCCGATGGATTTAAAAAATGGCGACGCTA
ATAAAGGCAAACAACTTGTAGCCGAAAATTGCACCGCTTGCCATGGCATTAAATCCCAAAACATTCCAGCCCCTATGGAC
AGCCTTAGCGCGAGCAACTCTTTTGGGGTCGTGCCACCGGATTTAAGCCATGTGGCGGGGGTTTTGAATGCGAATTTCTT
AGCCCACTTCATCAAAGACCCGGTGAAAACGGCGAAATTGAGCCATAAATTTAACGATGAAAGGCCCTATCCTATGCCGG
CGTTTTCTCAATTTAGCGATCAAGATTTGAGCGATATTGTGGCGTATCTCACTTCTATTTTGCCTAAAAATTTGAGCGAT
AAGGAAGTGTTTGCCCAAAGCTGTCAAAGGTGCCATAGCTTGGATTATGCGAAAGATAAGGCCTTTAGCGATCCTAAAGA
TTTAGCCAATTATTTAGGCTCTCATGCGCCTGATTTGTCCATGATGATTAGAGCTAAAGGCGAACATGGCTTGAATATTT
TCATCAACGATCCGCAAAAGCTTTTGCCTGGCACGGCTATGCCTAGAGTGGGATTGAGTGAACAAGCTCAAAAACAAGTC
ATCGCATATTTGGAAAAAGCGGGCGATAGGAAAAAACATGAAAGGAATACCTTAGGGATAAAAATCATGATTTTCTTTGC
GGTGCTGTCGTTCTTGGCTTATGCGTGGAAAAGAAAAGTTTGGAGCGAAGTGCATTGA

Upstream 100 bases:

>100_bases
AATACATCGGCTTAGCGGGTTCAATCACTTTTTTAGCCCTTTTCTTTGTGGTGTTGCCCATTATCACTATCGCCGAGAGC
AAGAAACAAGGGGGTGCTAG

Downstream 100 bases:

>100_bases
ATTAAAAAAGGGGGGGGGAGAGCATGTAAGGGGCTTTTTCTATGAGACTGATCATCAATTTCTTTATATTAAAAATAAAC
TTGTATTTTACAAGAAATAG

Product: ubiquinol cytochrome c oxidoreductase, cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: Ubiquinol-Cytochrome C Reductase Cytochrome C1 Subunit; Cytochrome C Subfamily Protein; Cytochrome C Class I; Ubiquinol-Cytochrome C Reductase Cytochrome C Subunit; Ubiquinol-Cytochrome C Reductase Cytochrome Subunit C

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKEFKILIILIVVVGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLVAENCTACHGIKSQNIPAPMD
SLSASNSFGVVPPDLSHVAGVLNANFLAHFIKDPVKTAKLSHKFNDERPYPMPAFSQFSDQDLSDIVAYLTSILPKNLSD
KEVFAQSCQRCHSLDYAKDKAFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLSEQAQKQV
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH

Sequences:

>Translated_285_residues
MKEFKILIILIVVVGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLVAENCTACHGIKSQNIPAPMD
SLSASNSFGVVPPDLSHVAGVLNANFLAHFIKDPVKTAKLSHKFNDERPYPMPAFSQFSDQDLSDIVAYLTSILPKNLSD
KEVFAQSCQRCHSLDYAKDKAFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLSEQAQKQV
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH
>Mature_285_residues
MKEFKILIILIVVVGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLVAENCTACHGIKSQNIPAPMD
SLSASNSFGVVPPDLSHVAGVLNANFLAHFIKDPVKTAKLSHKFNDERPYPMPAFSQFSDQDLSDIVAYLTSILPKNLSD
KEVFAQSCQRCHSLDYAKDKAFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLSEQAQKQV
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH

Specific function: Unknown

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.10.2.2

Molecular weight: Translated: 31686; Mature: 31686

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFKILIILIVVVGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLV
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHH
AENCTACHGIKSQNIPAPMDSLSASNSFGVVPPDLSHVAGVLNANFLAHFIKDPVKTAKL
HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SHKFNDERPYPMPAFSQFSDQDLSDIVAYLTSILPKNLSDKEVFAQSCQRCHSLDYAKDK
HHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH
AFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLSEQAQKQV
CCCCHHHHHHHHCCCCCCHHHHEEECCCCCCEEEECCHHHHCCCCCCCCCCCHHHHHHHH
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEFKILIILIVVVGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLV
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHH
AENCTACHGIKSQNIPAPMDSLSASNSFGVVPPDLSHVAGVLNANFLAHFIKDPVKTAKL
HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SHKFNDERPYPMPAFSQFSDQDLSDIVAYLTSILPKNLSDKEVFAQSCQRCHSLDYAKDK
HHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH
AFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLSEQAQKQV
CCCCHHHHHHHHCCCCCCHHHHEEECCCCCCEEEECCHHHHCCCCCCCCCCCHHHHHHHH
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA