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The map label for this gene is yrbE [C]

Identifier: 108563874

GI number: 108563874

Start: 1506725

End: 1507858

Strand: Direct

Name: yrbE [C]

Synonym: HPAG1_1449

Alternate gene names: 108563874

Gene position: 1506725-1507858 (Clockwise)

Preceding gene: 108563872

Following gene: 108563875

Centisome position: 94.38

GC content: 39.95

Gene sequence:

>1134_bases
ATGAAGACAGAGAAACAAAAATTTTTAGAGATGCGTAAAGATGGGGCGAACTCTGTGCTGATTTTAAGAGGGGATTGGGA
TTTTAAAACGAGCGTGTTTCGTTTAGATGAGTTGAAAAAAAATTTATTAGATCATCAAGGGCCTTTAAAAATGGATTTCT
CAGGGTGTCAAAAAGTGGATTTTGTTTTTGGCATGTTTTTATTTGATTTAATTAAGGAGCGTTCTTTAAACATTGAATTG
TGCAATGTGAGCGAGAATAACGCATGCGCTTTGAAAGTGGTTAAAGATTGGCTTGAAAAAGAAGAGGATTTAGAGACTAA
AAAAGCGGGCAAACACTACGAACTTTTGATCACTAAATTGGGTAAGAGTATCGTAGAAACTTACAACACCTTTTTAAACG
CGTTCAATTTTTGCGGCATGATTTTATTTTACTTCATTAAAAGCGTTTTCAACCCCAAACGCTTTTGCATCACTCCTTTG
CTCTATCATATCAATGAATCCGGGTTTAAGGTTTTGCCCGTGAGTATTTTAACGGTGTTTATCGTGGGGTTTGCCGTTGC
TTTACAAGGGGCTTTACAATTGCAAGACTTGGGCGCGCCTTTAATGTCGGTTGAAATGACGGCTAAACTCGCTTTAAGAG
AGATCGGCCCTTTTATTTTAACCCTTGTGGTTGCCGGAAGGAGCGCGAGCAGTTTTACCGCGCAAATTGGGGTGATGAAG
ATCACTGAAGAATTGGACGCGATGAAAACCATGGGCTTTAACCCTTTTGAATTTTTAGTATTGCCTAGGGTGTTAGCCTT
AGTGATTGTTTTGCCTTTATTGGTGTTTATTGCCGATTCGTTCGCCATTCTTGGGGGCATGTTTGCGATTAAATACCAAT
TGGATTTGGGCTTTCCGAGTTATATAGACAGATTTCATGACACAGTGGGCTGGAATCATTTTTTGGTAGGGATTGTCAAA
GCCCCTTTTTGGGGGTTTGCGATTGCGATGGTAGGGTGCATGCGAGGGTTTGAAGTCAAGGGGGATACTGAGAGCATTGG
GCGCTTGACCACTATTAGTGTCGTGAATGCGTTGTTTTGGATCATTTTCTTAGACGCTGTTTTTTCTATTGTCTTTTCTA
AGTTGAACATATAA

Upstream 100 bases:

>100_bases
ATTGTTTAACTTTTTGTTTTATCATTGTGTTAAAATAGTCGTTTTAACAAACAAGATTTTGTTAATAGATTTTACCTAAT
CTGAGAGAGAATATATTTTA

Downstream 100 bases:

>100_bases
TGAACGCTATTAACAATCAAGTCTTAATTGAAGTGAAGGATCTCCATAGCGCTTTTGGAAGCACCATTATCCATAGGGGC
GTGAGTTTTAGCGTGCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVDFVFGMFLFDLIKERSLNIEL
CNVSENNACALKVVKDWLEKEEDLETKKAGKHYELLITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL
LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVK
APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAVFSIVFSKLNI

Sequences:

>Translated_377_residues
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVDFVFGMFLFDLIKERSLNIEL
CNVSENNACALKVVKDWLEKEEDLETKKAGKHYELLITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL
LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVK
APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAVFSIVFSKLNI
>Mature_377_residues
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVDFVFGMFLFDLIKERSLNIEL
CNVSENNACALKVVKDWLEKEEDLETKKAGKHYELLITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL
LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPSYIDRFHDTVGWNHFLVGIVK
APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAVFSIVFSKLNI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=30.6201550387597, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 42451; Mature: 42451

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVD
CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHH
FVFGMFLFDLIKERSLNIELCNVSENNACALKVVKDWLEKEEDLETKKAGKHYELLITKL
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH
GKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPLLYHINESGFKVLPVSILTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHH
IVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHH
YIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFW
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IIFLDAVFSIVFSKLNI
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKNLLDHQGPLKMDFSGCQKVD
CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHH
FVFGMFLFDLIKERSLNIELCNVSENNACALKVVKDWLEKEEDLETKKAGKHYELLITKL
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH
GKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPLLYHINESGFKVLPVSILTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHH
IVGFAVALQGALQLQDLGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADSFAILGGMFAIKYQLDLGFPS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHH
YIDRFHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFW
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IIFLDAVFSIVFSKLNI
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA