| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is ilvE [H]
Identifier: 108563872
GI number: 108563872
Start: 1504869
End: 1505891
Strand: Direct
Name: ilvE [H]
Synonym: HPAG1_1447
Alternate gene names: 108563872
Gene position: 1504869-1505891 (Clockwise)
Preceding gene: 108563871
Following gene: 108563874
Centisome position: 94.27
GC content: 44.48
Gene sequence:
>1023_bases ATGGCAAATTTGGAAAATTTAGACTGGAAAAATTTAGGCTTTAGCTACATTAAAACGGATTTTCGCTTCATCGCTACTTA TAAAAACGGCTCTTGGTCGCATGGCGAATTGGTGAGCGAAAATGTGTTGCAACTCAGCGAAGGTTCGCCGGTCTTGCACT ACGGGCAGGCTTGTTTTGAAGGCTTGAAGGCTTACCGCTCTCAAAAGGGGAAGGCTTTACTTTTTCGCCCTTTAGAAAAC GCCAAACGCTTGCAAACTTCATGCGAAAGACTGCTTATGCCTAAAGTGAGTGAAGAGCTGTTTTTAAGGGCATGCGCTGA AGTAGTCAAAGCGAATCAAAAATGGCTCGCTCCTTATAAAAGCGGGGCGAGTTTGTATTTGCGCCCTTTTGTCATAGGCG TAGGGGATAATTTGGGGGTAAAGCCGGCTAATGAATACCTTTTTATCGTGTTTTGTGCGCCTGTGGGGGCGTATTTTAAG GGGGGTATAGAAAAAAGGGGGGCTAGGTTTATCACCACGGCGTTTGATAGGGCCGCGCCTAAAGGCACCGGAGGGGTGAA AGTAGGGGGGAATTATGCTGCAAGCCTGTTAGCCCATAAAATGGCTGTAGAGCAAGGCTATGATGATTGCATTTATTTAG ATCCTGCCACGCACACTAAAATTGAAGAAGTGGGGGCGGCGAATTTTTTTGGCATCACGCATGATAACGCCTTTATCACC CCGCATTCGCCAAGCATTTTGCCAAGCATTACCAAAAAAAGCTTGATGGTTTTGGCTAAAGAGTATTTGAACCTCAAAGT AGAAGAGAGGGAAATCCTAATGGATGAGTTGGATGCGTTTAAAGAAGCTGGAGCGTGCGGGACAGCTGCAATCATTACGC CCATTAAAGAAATCGCGCACAATAACAAGTCTTATTTTTTTGAAACACCGGGCCATATTACTAAACAACTCTATGATTTG CTTTTATCCATCCAACAAGGCGAACAAAAAGCCCCTAAAGATTGGATTTTTGAAGTTGGCTAA
Upstream 100 bases:
>100_bases GTGCGCCGAGTTTATGCGTTTCAAATCAGTTACTTGAGGGATTTTTAACCCCTTTTTAGATACAATCGCACCTGAAACTA TCCATGTTAAAGGTGTGAAA
Downstream 100 bases:
>100_bases AAGGTTAAAATTTATAGCTGTATGCCGCATAAAATAAGGGCGAAGTCTCAAAGCGTTTGGAGCTAGAAAGCAATCTGGCG GTGGGTAAGATTTTAAACCC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MANLENLDWKNLGFSYIKTDFRFIATYKNGSWSHGELVSENVLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLEN AKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVFCAPVGAYFK GGIEKRGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKMAVEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFIT PHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELDAFKEAGACGTAAIITPIKEIAHNNKSYFFETPGHITKQLYDL LLSIQQGEQKAPKDWIFEVG
Sequences:
>Translated_340_residues MANLENLDWKNLGFSYIKTDFRFIATYKNGSWSHGELVSENVLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLEN AKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVFCAPVGAYFK GGIEKRGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKMAVEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFIT PHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELDAFKEAGACGTAAIITPIKEIAHNNKSYFFETPGHITKQLYDL LLSIQQGEQKAPKDWIFEVG >Mature_339_residues ANLENLDWKNLGFSYIKTDFRFIATYKNGSWSHGELVSENVLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENA KRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPANEYLFIVFCAPVGAYFKG GIEKRGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKMAVEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFITP HSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELDAFKEAGACGTAAIITPIKEIAHNNKSYFFETPGHITKQLYDLL LSIQQGEQKAPKDWIFEVG
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=346, Percent_Identity=32.3699421965318, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI38176287, Length=346, Percent_Identity=32.3699421965318, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI296010906, Length=346, Percent_Identity=32.3699421965318, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI50658084, Length=310, Percent_Identity=30.6451612903226, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI258614015, Length=263, Percent_Identity=31.9391634980989, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI296010902, Length=346, Percent_Identity=28.0346820809249, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI296010900, Length=252, Percent_Identity=32.1428571428571, Blast_Score=123, Evalue=2e-28, Organism=Escherichia coli, GI48994963, Length=314, Percent_Identity=31.5286624203822, Blast_Score=126, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17568601, Length=310, Percent_Identity=31.9354838709677, Blast_Score=152, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17565728, Length=266, Percent_Identity=31.9548872180451, Blast_Score=110, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6322002, Length=318, Percent_Identity=32.3899371069182, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6322608, Length=318, Percent_Identity=32.7044025157233, Blast_Score=148, Evalue=1e-36, Organism=Drosophila melanogaster, GI24641779, Length=341, Percent_Identity=29.3255131964809, Blast_Score=152, Evalue=3e-37,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 37688; Mature: 37557
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLENLDWKNLGFSYIKTDFRFIATYKNGSWSHGELVSENVLQLSEGSPVLHYGQACFE CCCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH GLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYK HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC SGASLYLRPFVIGVGDNLGVKPANEYLFIVFCAPVGAYFKGGIEKRGARFITTAFDRAAP CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHCCHHHCCCEEEEHHHHHCCC KGTGGVKVGGNYAASLLAHKMAVEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFIT CCCCCEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCEEEEECCCEEEC PHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELDAFKEAGACGTAAIITPIKEIAH CCCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC NNKSYFFETPGHITKQLYDLLLSIQQGEQKAPKDWIFEVG CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEECC >Mature Secondary Structure ANLENLDWKNLGFSYIKTDFRFIATYKNGSWSHGELVSENVLQLSEGSPVLHYGQACFE CCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHH GLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAPYK HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC SGASLYLRPFVIGVGDNLGVKPANEYLFIVFCAPVGAYFKGGIEKRGARFITTAFDRAAP CCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHCCHHHCCCEEEEHHHHHCCC KGTGGVKVGGNYAASLLAHKMAVEQGYDDCIYLDPATHTKIEEVGAANFFGITHDNAFIT CCCCCEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCEEEEECCCEEEC PHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELDAFKEAGACGTAAIITPIKEIAH CCCCCCCHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC NNKSYFFETPGHITKQLYDLLLSIQQGEQKAPKDWIFEVG CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]