Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is bcgIA [H]

Identifier: 108563866

GI number: 108563866

Start: 1497943

End: 1499154

Strand: Direct

Name: bcgIA [H]

Synonym: HPAG1_1441

Alternate gene names: 108563866

Gene position: 1497943-1499154 (Clockwise)

Preceding gene: 108563865

Following gene: 108563867

Centisome position: 93.83

GC content: 37.05

Gene sequence:

>1212_bases
ATGCAAGCTTTTCAGTTAGAAGATGATGTTGATGACTATGTTAAAAAAGAATTGATTAATTTAGGGCTTATGAAAAATAA
GGATTTTAATGTTAAAAGCCAAATGAGTCCTAGCCTTAAAAACGCCCTTTTGAATGCGAGTAAAACTAAAGATAAAACTT
CTTATGGCGAGCCAGATTTTAGCTTAGAAAAATACACGCACCCTAAAAATAAAGAGAGCGTTATCCCTATAATCATAGAA
AACAAACTCTACGCTAAAAATTTAAAAAAGCTCAAAAACGACGCGTTGCAAAACGATGACAATTCCATTTCAAAGTTCGC
CGTGAATGGGGCTTTACACTACGCTCAAAATATCCTAAGAGACAAAGAAAAATATAAAGAATGTATCGCCATAGGCATAG
CCGGCGATGATGAACAAAACCTTTTGATAGAAGTGTATTATGTTTTTGCAAGCGGGATCAATTCGCACAAACTCACTAGC
GCTAAAAACCTGCATTTTTTAGAAAATCAAGAATCGTTTAACGCTTTTTATAAAGAATGCACGCTCACGGAAGAAGAAAA
GCATTCCATCTTAATCAAAACCAAAGCCGATCTAAACGAAACCGCTAAAAAACTCAACCGCCTTATGCATAACCACAACA
TCACCGCGCCTCAGCGCGTGCTATACGTGAGCGGCATGCTTTTATCCATGCAAGAAATTAAGGGCAAAAAAGGGGGTTTA
AAACCAAGCGATTTAAAAGGCGAATTGACTGACACTAGCCGTGATGGCGTTTTAGTGTTTAACCAAATTAGCGAATTTTT
GAAAACCAAAAACTTGAGCGAAGAAAAACGAGATCTAATGCTCGCCAGTTTCAAAGAAATCAGTAAAGACCCGCAACGCG
ATAAAGAAACAAGCCTAGATAAAGCCATAAGCATGCTTTTAGAAAAAGATTCAAGTATCACTAAGCAAATTTTTACCTTT
CTTTATGAATTTGTCCATAAGCCCATTAATGAAAGCGACAATACCGGTCATTTAGACATCATGGGCGAACTTTATAGCGA
ATTTTTAAAATACGCTTTAGGGGATGGTAAGGAATTAGGCATTGTTTTAACCCCGCCTTATGTAACTAAAATGATGAGCG
AACTTTTAGGGGTTAATGCAAAGTCTTTTGTGATGGATTTGGCCGCAGGGAGCGCGGGTTTTTTTAATTTCTTCTATGGT
GCTAATGATTGA

Upstream 100 bases:

>100_bases
TAAAACACCTTAAAGCTTTAAACATTAAAGCGCACTTTGCGATCGCGCTTTGCAGCGCGGATGAATGAGTTATAATTTTA
ATTTTTAAAAGGATAAAACC

Downstream 100 bases:

>100_bases
AGACATTGAAAAAACCTATGGTAAAAACACCACTAAAGCGAACGAAAAAATAAAAAACGCAAAAACCACGCAGCTTTTAG
GCGTGGAGCTTAACGCTGAA

Product: restriction enzyme BcgI alpha chain-like protein

Products: NA

Alternate protein names: Adenine-specific methyltransferase activity [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MQAFQLEDDVDDYVKKELINLGLMKNKDFNVKSQMSPSLKNALLNASKTKDKTSYGEPDFSLEKYTHPKNKESVIPIIIE
NKLYAKNLKKLKNDALQNDDNSISKFAVNGALHYAQNILRDKEKYKECIAIGIAGDDEQNLLIEVYYVFASGINSHKLTS
AKNLHFLENQESFNAFYKECTLTEEEKHSILIKTKADLNETAKKLNRLMHNHNITAPQRVLYVSGMLLSMQEIKGKKGGL
KPSDLKGELTDTSRDGVLVFNQISEFLKTKNLSEEKRDLMLASFKEISKDPQRDKETSLDKAISMLLEKDSSITKQIFTF
LYEFVHKPINESDNTGHLDIMGELYSEFLKYALGDGKELGIVLTPPYVTKMMSELLGVNAKSFVMDLAAGSAGFFNFFYG
AND

Sequences:

>Translated_403_residues
MQAFQLEDDVDDYVKKELINLGLMKNKDFNVKSQMSPSLKNALLNASKTKDKTSYGEPDFSLEKYTHPKNKESVIPIIIE
NKLYAKNLKKLKNDALQNDDNSISKFAVNGALHYAQNILRDKEKYKECIAIGIAGDDEQNLLIEVYYVFASGINSHKLTS
AKNLHFLENQESFNAFYKECTLTEEEKHSILIKTKADLNETAKKLNRLMHNHNITAPQRVLYVSGMLLSMQEIKGKKGGL
KPSDLKGELTDTSRDGVLVFNQISEFLKTKNLSEEKRDLMLASFKEISKDPQRDKETSLDKAISMLLEKDSSITKQIFTF
LYEFVHKPINESDNTGHLDIMGELYSEFLKYALGDGKELGIVLTPPYVTKMMSELLGVNAKSFVMDLAAGSAGFFNFFYG
AND
>Mature_403_residues
MQAFQLEDDVDDYVKKELINLGLMKNKDFNVKSQMSPSLKNALLNASKTKDKTSYGEPDFSLEKYTHPKNKESVIPIIIE
NKLYAKNLKKLKNDALQNDDNSISKFAVNGALHYAQNILRDKEKYKECIAIGIAGDDEQNLLIEVYYVFASGINSHKLTS
AKNLHFLENQESFNAFYKECTLTEEEKHSILIKTKADLNETAKKLNRLMHNHNITAPQRVLYVSGMLLSMQEIKGKKGGL
KPSDLKGELTDTSRDGVLVFNQISEFLKTKNLSEEKRDLMLASFKEISKDPQRDKETSLDKAISMLLEKDSSITKQIFTF
LYEFVHKPINESDNTGHLDIMGELYSEFLKYALGDGKELGIVLTPPYVTKMMSELLGVNAKSFVMDLAAGSAGFFNFFYG
AND

Specific function: Recognizes the double-stranded sequence 5'-CGAN(6)TGC-3' and cleaves bilaterally and symmetrically outside the sequence to release a 34-base pair fragment. Methylation of the recognition sequence occurs on the adenine in either one or both strands [H]

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003356
- InterPro:   IPR002052
- InterPro:   IPR002296 [H]

Pfam domain/function: PF02384 N6_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 45599; Mature: 45599

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFQLEDDVDDYVKKELINLGLMKNKDFNVKSQMSPSLKNALLNASKTKDKTSYGEPDF
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
SLEKYTHPKNKESVIPIIIENKLYAKNLKKLKNDALQNDDNSISKFAVNGALHYAQNILR
CHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DKEKYKECIAIGIAGDDEQNLLIEVYYVFASGINSHKLTSAKNLHFLENQESFNAFYKEC
HHHHHHHHEEEEECCCCCCCHHHEEEEHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHC
TLTEEEKHSILIKTKADLNETAKKLNRLMHNHNITAPQRVLYVSGMLLSMQEIKGKKGGL
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
KPSDLKGELTDTSRDGVLVFNQISEFLKTKNLSEEKRDLMLASFKEISKDPQRDKETSLD
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
KAISMLLEKDSSITKQIFTFLYEFVHKPINESDNTGHLDIMGELYSEFLKYALGDGKELG
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEE
IVLTPPYVTKMMSELLGVNAKSFVMDLAAGSAGFFNFFYGAND
EEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure
MQAFQLEDDVDDYVKKELINLGLMKNKDFNVKSQMSPSLKNALLNASKTKDKTSYGEPDF
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
SLEKYTHPKNKESVIPIIIENKLYAKNLKKLKNDALQNDDNSISKFAVNGALHYAQNILR
CHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DKEKYKECIAIGIAGDDEQNLLIEVYYVFASGINSHKLTSAKNLHFLENQESFNAFYKEC
HHHHHHHHEEEEECCCCCCCHHHEEEEHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHC
TLTEEEKHSILIKTKADLNETAKKLNRLMHNHNITAPQRVLYVSGMLLSMQEIKGKKGGL
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
KPSDLKGELTDTSRDGVLVFNQISEFLKTKNLSEEKRDLMLASFKEISKDPQRDKETSLD
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
KAISMLLEKDSSITKQIFTFLYEFVHKPINESDNTGHLDIMGELYSEFLKYALGDGKELG
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEE
IVLTPPYVTKMMSELLGVNAKSFVMDLAAGSAGFFNFFYGAND
EEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8451198; 8276869 [H]