| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563865
Identifier: 108563865
GI number: 108563865
Start: 1497335
End: 1497910
Strand: Direct
Name: 108563865
Synonym: HPAG1_1440
Alternate gene names: NA
Gene position: 1497335-1497910 (Clockwise)
Preceding gene: 108563864
Following gene: 108563866
Centisome position: 93.8
GC content: 39.41
Gene sequence:
>576_bases ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTAAACGATCTGCCCTTAAATTTAAA AGTAAGGGTTTTAGATGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCAAAGAATTTGTGAAAATCATGCAAGAACAAGGT TTGAATATTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGG CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGTGTTTAAGGGCTAATAATGCTGTTTCGTATGCGGGGAAAAGCTTAG AATTTCGTGCTAACAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC ACCACCGGCACCACCCTAAAAGAAGCCCTAAAACACCTTAAAGCTTTAAACATTAAAGCGCACTTTGCGATCGCGCTTTG CAGCGCGGATGAATGA
Upstream 100 bases:
>100_bases ACGCTCATGCGTTACAAGAAAAATTCGGGTGCGAAGTTTTGGAATTAGACGCTCAAAAAAGCGTTGGGGATTTGCACCGC CAGATTGCAGCCTTTATTGA
Downstream 100 bases:
>100_bases GTTATAATTTTAATTTTTAAAAGGATAAAACCATGCAAGCTTTTCAGTTAGAAGATGATGTTGATGACTATGTTAAAAAA GAATTGATTAATTTAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoribosyltransferase; Purine/Pyrimidine Phosphoribosyltransferase; Transformation Protein; Amidophosphoribosyltransferase
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRCLTCLKLSFKPLCPNCLNDLPLNLKVRVLDGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKIMQEQG LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGCLRANNAVSYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII TTGTTLKEALKHLKALNIKAHFAIALCSADE
Sequences:
>Translated_191_residues MRCLTCLKLSFKPLCPNCLNDLPLNLKVRVLDGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKIMQEQG LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGCLRANNAVSYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII TTGTTLKEALKHLKALNIKAHFAIALCSADE >Mature_191_residues MRCLTCLKLSFKPLCPNCLNDLPLNLKVRVLDGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKIMQEQG LNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGCLRANNAVSYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII TTGTTLKEALKHLKALNIKAHFAIALCSADE
Specific function: Unknown
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21271; Mature: 21271
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCLTCLKLSFKPLCPNCLNDLPLNLKVRVLDGVSVYSFYAYSEIEELIKSKYALIGSRI CCCHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LPLLSQKAGKEFVKIMQEQGLNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGCL HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RANNAVSYAGKSLEFRANNPRNFTFKGDETLDYFLLDDIITTGTTLKEALKHLKALNIKA HCCCCHHHCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEE HFAIALCSADE EEEEEEECCCC >Mature Secondary Structure MRCLTCLKLSFKPLCPNCLNDLPLNLKVRVLDGVSVYSFYAYSEIEELIKSKYALIGSRI CCCHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LPLLSQKAGKEFVKIMQEQGLNIPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGCL HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RANNAVSYAGKSLEFRANNPRNFTFKGDETLDYFLLDDIITTGTTLKEALKHLKALNIKA HCCCCHHHCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEE HFAIALCSADE EEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA