| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is pitB [C]
Identifier: 108563847
GI number: 108563847
Start: 1478558
End: 1480159
Strand: Direct
Name: pitB [C]
Synonym: HPAG1_1422
Alternate gene names: 108563847
Gene position: 1478558-1480159 (Clockwise)
Preceding gene: 108563836
Following gene: 108563848
Centisome position: 92.62
GC content: 43.26
Gene sequence:
>1602_bases ATGGAAATTAAAAACATCAAAGAGTTTGAAAAAGCTTCCAAAAAACTCCAAAAAGACACTTTAAAGATCGCTCTCGCTCT TTTGTTTCTCATTGGCGCTGCTTTGCTCGCTCTTATTTTTGGGCAGGCTAATTCTAAGGGATTGTTGCTCATTTTTGCGG CTGTGATTGGGGGGTATATGGCGATGAATATTGGTGCGAATGATGTGTCTAATAATGTCGGCCCTGCCGTAGGCTCTAAA GCCATTAGCATGGGCGGGGCGATTTTGATTGCCGGGATTTGTGAAATGCTTGGGGCGATCATTGCTGGGGGGGAAGTGGT TTCTACGATTAAGGGCCGTATCGTTTCGCCTGAATCCATTAATGATGCGCATGTTTTCATTAATGTCATGTTGGCTAGCT TGCTCAGTGGGGCGTTGTGGTTGCATGTAGCGACTTTAATTGGCGCTCCTGTTTCCACTTCACACTCTGTGGTGGGGGGG ATTATGGGGGCTGGAATGGCAGCAGCTGGAATGGCAGCGGTCAATTGGCATTTTTTATCAGGCATTGTAGCGAGTTGGGT AATTTCGCCTTTAATGGGGGCTTTGATAGCCATGTTTTTTTTAATGCTCATTAAAAAGACTATCGCTTATAAAGAAGATA AAAAGAGCGCGGCTTTAAAGGTCGTGCCTTATTTGGTAGCGTTGATGAGCTTAACATTCAGCTGGTATTTGATTATTAAG GTTTTAAAACGCCTCTATGCGGTGGGTTTTGAAATCCAACTGGCTTGTGGCTGTATCCTTGCGCTTTTAATCTTTATTCT TTTTAAAAGATTTGTGTTAAAAAAAGCCCCGCAATTAGAAAACAGCCATGAAAGCATTAATGAGCTTTTCAATGTCCCTT TGATTTTTGCCGCCGCGCTTTTAAGCTTTGCGCATGGGGCTAATGATGTGGCTAACGCTATAGGCCCTTTAGCGGCTATC AGTCAAACTTTAGAAGATGCAAATAGCCCTATAGGGAATACTTTAAGCTCTGTGCCGTTGTGGATTATGGTAGTAGGGGC GGCTGGGATTGCTTTAGGCTTGAGTTTGTATGGGCCAAAGCTCATTAAAACGGTGGGGTCAGAAATCACAGAATTAGACA AAATGCAAGCCTTTTGCATCGCGCTTTCTGCAGTCATCACCGTGCTTTTAGCCTCTCAATTAGGCTTGCCCGTAAGCTCT ACGCATATTGTGGTGGGCGCGGTGTTTGGGGTGGGCTTTTTAAGAGAGCGCTTAAGAGAGCAATCAAGAAGGCGTTTTGC TAGGATCAGAGACAACATTGTAGCGGCGCACTTTGGGGAAGATTTAGAAGAAATTGAAGGTTTTTTAGAGCGCTTTGATA AAGCCAATTTGAAAGAAAAATCGCTCATGCTAGAGAGCTTGAAAAAAAGCAAGAACACCGCTATCGCTTTGGAATTGAAA AAGAAAGAAAAAAAGTCGCTTAAAAAAGTGTATAAAGAAGAGGTGATCAAACGCTCCATTTTAAAAAAGATTGTTACCGC TTGGTTGGTAACTGTGCCGGTTTCTGCGCTTTTGGGGGCGCTTCTGTTTGTGGCTCTTGGTTTTATAGAAAAGTATTTCT AG
Upstream 100 bases:
>100_bases ATATAATGAGCCATTTTTATCAAACAACGCTTTTTAAGAGTGGCTCAAGGGCTAATTGGATAGAATGAGACCACTATTAG AATAAGGTTTTTATGACGAT
Downstream 100 bases:
>100_bases GGTTTTTAAAGGCTTGATTTTTAAAGTTAGGCTTAATCTTTTATGTTAAAATTCTGAGATTTTATATTTATATTTTATCT TTATCGTTAGGTTTTAGGTT
Product: phosphate permease
Products: Proton [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MEIKNIKEFEKASKKLQKDTLKIALALLFLIGAALLALIFGQANSKGLLLIFAAVIGGYMAMNIGANDVSNNVGPAVGSK AISMGGAILIAGICEMLGAIIAGGEVVSTIKGRIVSPESINDAHVFINVMLASLLSGALWLHVATLIGAPVSTSHSVVGG IMGAGMAAAGMAAVNWHFLSGIVASWVISPLMGALIAMFFLMLIKKTIAYKEDKKSAALKVVPYLVALMSLTFSWYLIIK VLKRLYAVGFEIQLACGCILALLIFILFKRFVLKKAPQLENSHESINELFNVPLIFAAALLSFAHGANDVANAIGPLAAI SQTLEDANSPIGNTLSSVPLWIMVVGAAGIALGLSLYGPKLIKTVGSEITELDKMQAFCIALSAVITVLLASQLGLPVSS THIVVGAVFGVGFLRERLREQSRRRFARIRDNIVAAHFGEDLEEIEGFLERFDKANLKEKSLMLESLKKSKNTAIALELK KKEKKSLKKVYKEEVIKRSILKKIVTAWLVTVPVSALLGALLFVALGFIEKYF
Sequences:
>Translated_533_residues MEIKNIKEFEKASKKLQKDTLKIALALLFLIGAALLALIFGQANSKGLLLIFAAVIGGYMAMNIGANDVSNNVGPAVGSK AISMGGAILIAGICEMLGAIIAGGEVVSTIKGRIVSPESINDAHVFINVMLASLLSGALWLHVATLIGAPVSTSHSVVGG IMGAGMAAAGMAAVNWHFLSGIVASWVISPLMGALIAMFFLMLIKKTIAYKEDKKSAALKVVPYLVALMSLTFSWYLIIK VLKRLYAVGFEIQLACGCILALLIFILFKRFVLKKAPQLENSHESINELFNVPLIFAAALLSFAHGANDVANAIGPLAAI SQTLEDANSPIGNTLSSVPLWIMVVGAAGIALGLSLYGPKLIKTVGSEITELDKMQAFCIALSAVITVLLASQLGLPVSS THIVVGAVFGVGFLRERLREQSRRRFARIRDNIVAAHFGEDLEEIEGFLERFDKANLKEKSLMLESLKKSKNTAIALELK KKEKKSLKKVYKEEVIKRSILKKIVTAWLVTVPVSALLGALLFVALGFIEKYF >Mature_533_residues MEIKNIKEFEKASKKLQKDTLKIALALLFLIGAALLALIFGQANSKGLLLIFAAVIGGYMAMNIGANDVSNNVGPAVGSK AISMGGAILIAGICEMLGAIIAGGEVVSTIKGRIVSPESINDAHVFINVMLASLLSGALWLHVATLIGAPVSTSHSVVGG IMGAGMAAAGMAAVNWHFLSGIVASWVISPLMGALIAMFFLMLIKKTIAYKEDKKSAALKVVPYLVALMSLTFSWYLIIK VLKRLYAVGFEIQLACGCILALLIFILFKRFVLKKAPQLENSHESINELFNVPLIFAAALLSFAHGANDVANAIGPLAAI SQTLEDANSPIGNTLSSVPLWIMVVGAAGIALGLSLYGPKLIKTVGSEITELDKMQAFCIALSAVITVLLASQLGLPVSS THIVVGAVFGVGFLRERLREQSRRRFARIRDNIVAAHFGEDLEEIEGFLERFDKANLKEKSLMLESLKKSKNTAIALELK KKEKKSLKKVYKEEVIKRSILKKIVTAWLVTVPVSALLGALLFVALGFIEKYF
Specific function: Potential transporter for phosphate [H]
COG id: COG0306
COG function: function code P; Phosphate/sulphate permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inorganic phosphate transporter (PiT) (TC 2.A.20) family [H]
Homologues:
Organism=Homo sapiens, GI31543630, Length=140, Percent_Identity=37.8571428571429, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI5803173, Length=132, Percent_Identity=38.6363636363636, Blast_Score=103, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71981576, Length=424, Percent_Identity=31.3679245283019, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI17557328, Length=482, Percent_Identity=25.9336099585062, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25146401, Length=154, Percent_Identity=37.6623376623377, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17539280, Length=191, Percent_Identity=34.0314136125654, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32566716, Length=180, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17536725, Length=148, Percent_Identity=28.3783783783784, Blast_Score=82, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6319773, Length=142, Percent_Identity=36.6197183098592, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI21356511, Length=253, Percent_Identity=30.4347826086957, Blast_Score=104, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001204 [H]
Pfam domain/function: PF01384 PHO4 [H]
EC number: NA
Molecular weight: Translated: 57104; Mature: 57104
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKNIKEFEKASKKLQKDTLKIALALLFLIGAALLALIFGQANSKGLLLIFAAVIGGYM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AMNIGANDVSNNVGPAVGSKAISMGGAILIAGICEMLGAIIAGGEVVSTIKGRIVSPESI EEECCCHHHCCCCCCHHCHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC NDAHVFINVMLASLLSGALWLHVATLIGAPVSTSHSVVGGIMGAGMAAAGMAAVNWHFLS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GIVASWVISPLMGALIAMFFLMLIKKTIAYKEDKKSAALKVVPYLVALMSLTFSWYLIIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLKRLYAVGFEIQLACGCILALLIFILFKRFVLKKAPQLENSHESINELFNVPLIFAAAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHH LSFAHGANDVANAIGPLAAISQTLEDANSPIGNTLSSVPLWIMVVGAAGIALGLSLYGPK HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH LIKTVGSEITELDKMQAFCIALSAVITVLLASQLGLPVSSTHIVVGAVFGVGFLRERLRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QSRRRFARIRDNIVAAHFGEDLEEIEGFLERFDKANLKEKSLMLESLKKSKNTAIALELK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEH KKEKKSLKKVYKEEVIKRSILKKIVTAWLVTVPVSALLGALLFVALGFIEKYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEIKNIKEFEKASKKLQKDTLKIALALLFLIGAALLALIFGQANSKGLLLIFAAVIGGYM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AMNIGANDVSNNVGPAVGSKAISMGGAILIAGICEMLGAIIAGGEVVSTIKGRIVSPESI EEECCCHHHCCCCCCHHCHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC NDAHVFINVMLASLLSGALWLHVATLIGAPVSTSHSVVGGIMGAGMAAAGMAAVNWHFLS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GIVASWVISPLMGALIAMFFLMLIKKTIAYKEDKKSAALKVVPYLVALMSLTFSWYLIIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLKRLYAVGFEIQLACGCILALLIFILFKRFVLKKAPQLENSHESINELFNVPLIFAAAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHH LSFAHGANDVANAIGPLAAISQTLEDANSPIGNTLSSVPLWIMVVGAAGIALGLSLYGPK HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH LIKTVGSEITELDKMQAFCIALSAVITVLLASQLGLPVSSTHIVVGAVFGVGFLRERLRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QSRRRFARIRDNIVAAHFGEDLEEIEGFLERFDKANLKEKSLMLESLKKSKNTAIALELK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEH KKEKKSLKKVYKEEVIKRSILKKIVTAWLVTVPVSALLGALLFVALGFIEKYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + phosphate [Periplasm] = Proton [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]