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The map label for this gene is 108563837

Identifier: 108563837

GI number: 108563837

Start: 1469402

End: 1470982

Strand: Reverse

Name: 108563837

Synonym: HPAG1_1412

Alternate gene names: NA

Gene position: 1470982-1469402 (Counterclockwise)

Preceding gene: 108563838

Following gene: 108563835

Centisome position: 92.15

GC content: 31.94

Gene sequence:

>1581_bases
ATGACTAAAAAACCGGCACGAAAAATTTTAAGCTTTTCAACCACCATGCGAAACCCTAAAAGAATAGGGCAATTTTTAGC
TGTTTTAGGAAAGTTTGAAAATCAAATTCTTCAATCTTCAACGATCATGCAAATTATCAAATCCGTTTTGGCTCATAGGC
TTTATAGACCTACTTCTATCAATCAAAATAAAGAATTGAAAGAAAAATTTGACTCCAATAAATATATCTTTAGCGATGAA
GAATTAGAACGCATTATAGAAATATCCCCACAACAACATAAAGAAATGGGCTTTGAGCATGGATGGGAAAGTCGGTTTGA
TACTTGGTATAAGCTTATGTGTGAGTTTGGTTTTTGCTACTATGCAAAATATGAGAAAATACTCATCAGCGATAGCGCTA
AGATGCTTATTCTTGCTTATTATGATAAAGAAAACGATACTTTTAAAGAAAGCATTGATGAAAGCGTAGTTGGGGCTATA
TTTTTAAACGCTCTGTCTAAATATGAAGTAGGAAACCCTTATAAAAAGAACTTAAACCATAACAACCCCTTCAAACTATT
ACTCTCGCTTTTAAAACGACTCAAAAATGCCAATCTAACTCCCCTATCTGTCAAAGAAATCCCTATTTTACTTTGTTGGA
AAGATGATAACGCCAATGGGCTTTATGACTACATTATTCATTTAAGACAAGAAATCGTTACTATCAATAAAACAGAATTC
AGCTACTCAGATGAATTTATCTATGAAAAATGCCTAAAACTTTTAGAAAGTGTTAATAAAATACGATTTAAAATGAGCCA
AATCACTAACGAAGCCGTTGATGAATACATTAGAAAAATGCGTATTACAGGACTTATTTCATTGCGTGGTAATGGTAGGT
TTATTGATATTAATACTAATGAAAATAACAAAATAGATTATATCTTACAAACTCATAAGGCTTTTAAAGGGGATTATTTA
AACGACACTCAAGCTAACAAACTCTCCTTTTTTAACTACATGGCGATCGTGGATAGCTTTCTTGTCAGTGTTGCTCCAAT
CAGCGCTGATGAGAGGGTTAAATCAAGCAAATTGAATGAACTAGCAAACACTTATACTAAAGATTTTATCAAGCAAGAAT
TACTCATTACTTGCAACAAGCAAGAATCAAAAGACAGTTTTTTAAGACTCATTGATAAACCTTTACGCTTGGAATTTTTA
AGCGCTATTTTTTTGAAACAACATTTTGAAAATTTAAGCGTGATACCCAATTATAAAAGCGATGATGAAGGCTTGCCCGT
ATACACAGCAAGCGGTAACAAACCTGATATTGTAGCTATGGACACAAAAGCCCAAAGTTATATAGAAGTGAGCTTGATTA
GAGATAGAAGTCAAAGCGAAATGATACCTATTGCCAGACATTTAAAAGAATTGATTAAGAATAGCACTGATATTAGAGAA
AAATTTAGTGTTTTTGTAGCTCCAAATATCCATGATGATGCCAAAGAATATGCGGAATTTGCCCAATTCAAAGACAATAT
TAATATATGTTGTTATACTATTAATGATTTTATCAAAAAAGTAGAAAATAGCATAGAATAG

Upstream 100 bases:

>100_bases
TTATATTTTTAATATCAAAAGTAATTATATCAGTTATAATGACAATACCATTAAAGAAAATAGTCAAGAAATCTTTGTAA
CTAATTATAGGTGATTAATT

Downstream 100 bases:

>100_bases
TTACAGATCAATGACCATTTGAAAGCTTAAAATATCAAGCTTTCATCTCTAAGCCTTGCCTAAAACCCCTACCAAACTTA
AAAAGTATAAACATAGCGCA

Product: restriction endonuclease

Products: NA

Alternate protein names: AlwI Restriction Endonuclease Superfamily; Endonuclease

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MTKKPARKILSFSTTMRNPKRIGQFLAVLGKFENQILQSSTIMQIIKSVLAHRLYRPTSINQNKELKEKFDSNKYIFSDE
ELERIIEISPQQHKEMGFEHGWESRFDTWYKLMCEFGFCYYAKYEKILISDSAKMLILAYYDKENDTFKESIDESVVGAI
FLNALSKYEVGNPYKKNLNHNNPFKLLLSLLKRLKNANLTPLSVKEIPILLCWKDDNANGLYDYIIHLRQEIVTINKTEF
SYSDEFIYEKCLKLLESVNKIRFKMSQITNEAVDEYIRKMRITGLISLRGNGRFIDINTNENNKIDYILQTHKAFKGDYL
NDTQANKLSFFNYMAIVDSFLVSVAPISADERVKSSKLNELANTYTKDFIKQELLITCNKQESKDSFLRLIDKPLRLEFL
SAIFLKQHFENLSVIPNYKSDDEGLPVYTASGNKPDIVAMDTKAQSYIEVSLIRDRSQSEMIPIARHLKELIKNSTDIRE
KFSVFVAPNIHDDAKEYAEFAQFKDNINICCYTINDFIKKVENSIE

Sequences:

>Translated_526_residues
MTKKPARKILSFSTTMRNPKRIGQFLAVLGKFENQILQSSTIMQIIKSVLAHRLYRPTSINQNKELKEKFDSNKYIFSDE
ELERIIEISPQQHKEMGFEHGWESRFDTWYKLMCEFGFCYYAKYEKILISDSAKMLILAYYDKENDTFKESIDESVVGAI
FLNALSKYEVGNPYKKNLNHNNPFKLLLSLLKRLKNANLTPLSVKEIPILLCWKDDNANGLYDYIIHLRQEIVTINKTEF
SYSDEFIYEKCLKLLESVNKIRFKMSQITNEAVDEYIRKMRITGLISLRGNGRFIDINTNENNKIDYILQTHKAFKGDYL
NDTQANKLSFFNYMAIVDSFLVSVAPISADERVKSSKLNELANTYTKDFIKQELLITCNKQESKDSFLRLIDKPLRLEFL
SAIFLKQHFENLSVIPNYKSDDEGLPVYTASGNKPDIVAMDTKAQSYIEVSLIRDRSQSEMIPIARHLKELIKNSTDIRE
KFSVFVAPNIHDDAKEYAEFAQFKDNINICCYTINDFIKKVENSIE
>Mature_525_residues
TKKPARKILSFSTTMRNPKRIGQFLAVLGKFENQILQSSTIMQIIKSVLAHRLYRPTSINQNKELKEKFDSNKYIFSDEE
LERIIEISPQQHKEMGFEHGWESRFDTWYKLMCEFGFCYYAKYEKILISDSAKMLILAYYDKENDTFKESIDESVVGAIF
LNALSKYEVGNPYKKNLNHNNPFKLLLSLLKRLKNANLTPLSVKEIPILLCWKDDNANGLYDYIIHLRQEIVTINKTEFS
YSDEFIYEKCLKLLESVNKIRFKMSQITNEAVDEYIRKMRITGLISLRGNGRFIDINTNENNKIDYILQTHKAFKGDYLN
DTQANKLSFFNYMAIVDSFLVSVAPISADERVKSSKLNELANTYTKDFIKQELLITCNKQESKDSFLRLIDKPLRLEFLS
AIFLKQHFENLSVIPNYKSDDEGLPVYTASGNKPDIVAMDTKAQSYIEVSLIRDRSQSEMIPIARHLKELIKNSTDIREK
FSVFVAPNIHDDAKEYAEFAQFKDNINICCYTINDFIKKVENSIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61278; Mature: 61147

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKPARKILSFSTTMRNPKRIGQFLAVLGKFENQILQSSTIMQIIKSVLAHRLYRPTSI
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NQNKELKEKFDSNKYIFSDEELERIIEISPQQHKEMGFEHGWESRFDTWYKLMCEFGFCY
CCCHHHHHHHCCCCEEECHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCE
YAKYEKILISDSAKMLILAYYDKENDTFKESIDESVVGAIFLNALSKYEVGNPYKKNLNH
EHHHHEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
NNPFKLLLSLLKRLKNANLTPLSVKEIPILLCWKDDNANGLYDYIIHLRQEIVTINKTEF
CCHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHEECCCCC
SYSDEFIYEKCLKLLESVNKIRFKMSQITNEAVDEYIRKMRITGLISLRGNGRFIDINTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECC
ENNKIDYILQTHKAFKGDYLNDTQANKLSFFNYMAIVDSFLVSVAPISADERVKSSKLNE
CCCCEEHEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LANTYTKDFIKQELLITCNKQESKDSFLRLIDKPLRLEFLSAIFLKQHFENLSVIPNYKS
HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
DDEGLPVYTASGNKPDIVAMDTKAQSYIEVSLIRDRSQSEMIPIARHLKELIKNSTDIRE
CCCCCEEEECCCCCCCEEEECCCCCHHEEEEEHHCCCCCCHHHHHHHHHHHHHCCCCHHH
KFSVFVAPNIHDDAKEYAEFAQFKDNINICCYTINDFIKKVENSIE
HHEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCC
>Mature Secondary Structure 
TKKPARKILSFSTTMRNPKRIGQFLAVLGKFENQILQSSTIMQIIKSVLAHRLYRPTSI
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NQNKELKEKFDSNKYIFSDEELERIIEISPQQHKEMGFEHGWESRFDTWYKLMCEFGFCY
CCCHHHHHHHCCCCEEECHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCE
YAKYEKILISDSAKMLILAYYDKENDTFKESIDESVVGAIFLNALSKYEVGNPYKKNLNH
EHHHHEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
NNPFKLLLSLLKRLKNANLTPLSVKEIPILLCWKDDNANGLYDYIIHLRQEIVTINKTEF
CCHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHEECCCCC
SYSDEFIYEKCLKLLESVNKIRFKMSQITNEAVDEYIRKMRITGLISLRGNGRFIDINTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECC
ENNKIDYILQTHKAFKGDYLNDTQANKLSFFNYMAIVDSFLVSVAPISADERVKSSKLNE
CCCCEEHEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LANTYTKDFIKQELLITCNKQESKDSFLRLIDKPLRLEFLSAIFLKQHFENLSVIPNYKS
HHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
DDEGLPVYTASGNKPDIVAMDTKAQSYIEVSLIRDRSQSEMIPIARHLKELIKNSTDIRE
CCCCCEEEECCCCCCCEEEECCCCCHHEEEEEHHCCCCCCHHHHHHHHHHHHHCCCCHHH
KFSVFVAPNIHDDAKEYAEFAQFKDNINICCYTINDFIKKVENSIE
HHEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA