Click here to switch to the map view.

The map label for this gene is 108563832

Identifier: 108563832

GI number: 108563832

Start: 1463421

End: 1464455

Strand: Direct

Name: 108563832

Synonym: HPAG1_1407

Alternate gene names: NA

Gene position: 1463421-1464455 (Clockwise)

Preceding gene: 108563831

Following gene: 108563833

Centisome position: 91.67

GC content: 39.52

Gene sequence:

>1035_bases
ATGAGACTTTATGAGAGTTTATTAGAAATGTGCTTGAATAAGGCATGGGAGTATCAAACCCTAGCCTTAGAAAACCCAAG
CGTAGCTTGCATGGTGTTAGATAAAAACCATGAGATCTTGAGTTTAGAAACCCACAAAAAAGCCAAAACCCCACATGCAG
AAGTCTTGGCCGCCCAATCAGCACTAAAGATTTTACGCCCCAGTTTGAAAAACGATTTAGAAAAGTTAGAAGACCCTAAA
ACTTTAAGCGATTTTTTAAAAACGCGCCACGATAACGCTTTTACAGACTGCGTTTTTTTAATCACCCTAGAGCCATGCAA
TTCTTATGGCAAAACCCCAGCGTGCAGCGAATTGTTAGAAATTTTAAAGCCTAAAAGAGTGGTCATTGCCGCAGAAGAAA
ACGAAGCTAAAAAAGGGGGTTTAGCAAGGCTACAAAAGGCTCATATTGAAACAATGATTTGTCGCAATTTAGAAAACAAG
GCTAAAGACTTGCTCTTGCCTTTTAGGATAATGGAACAAAAGGGGCGTTTTAATTTGTTCAAACTCGCTTTAAGGATGAA
TGGGGATTATTACCATGGCAAGATCACCGGGCCAAAAAGCGTTATTTTCACGCACAACCAGCGAGCAATATGCGACACGC
TTATTGTTTCTGGGAAAACCATAAGAACGGACAACCCCTTATTAGACACCCGCTTTTGCGACAGCTTTTATCAAAATAAA
AACCCCAATATCGCTATTTTATCCAAGTGCTCAATTAATCCTAGTTCAAAAGTTTTTTCTACACCTAATCGCTTAGTCAA
TACTTTCCATGACCCTAAAGATTTACCCCTAGAGAAAGGGTTTAATTTCATTGAAGGGGGGTGGGGATTGTTTGAGGGCT
TGAGGGACAAAATAGATGTATTGCTTTTGCATTCGCATGCGTCTATGATTAGCGAAGCGTTTAATACGCTCGCTTTAAAA
ACCCCTTTTAAGGGGCGGTTGTTGCATGTGCAAATATTAGAAAATGAAGCCCTTTTATGGATAGAAAACTCTTAA

Upstream 100 bases:

>100_bases
ATGTAGCGTTTATCGTCGTGCCTTTAGTGGGGGCGTTTTTTGTTGATATTATTAACGCTTTAGCGATTAAAGGCTTTTTG
CTCTTGCCTTTTTTCCCGTC

Downstream 100 bases:

>100_bases
GATTATACCAGCCCTTAAACGCTTATTCTTACAATAGCGATTCGCTTTTTTTATACGATTTTTCACGCTCTTTGATTAAA
AATAGTGGCACGATTTTAGA

Product: riboflavin biosynthesis protein

Products: 5-amino-6-(5-phosphoribosylamino)uracil; NH3

Alternate protein names: Riboflavin Biosynthesis Protein; Riboflavin Biosynthesis Protein Ribd; Riboflavin Biosynthesis Protein RibG; Bifunctional Riboflavin Biosynthesis Protein RibD; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase; Riboflavin-Specific Deaminase; Priboflavin-Specific Deaminase

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRLYESLLEMCLNKAWEYQTLALENPSVACMVLDKNHEILSLETHKKAKTPHAEVLAAQSALKILRPSLKNDLEKLEDPK
TLSDFLKTRHDNAFTDCVFLITLEPCNSYGKTPACSELLEILKPKRVVIAAEENEAKKGGLARLQKAHIETMICRNLENK
AKDLLLPFRIMEQKGRFNLFKLALRMNGDYYHGKITGPKSVIFTHNQRAICDTLIVSGKTIRTDNPLLDTRFCDSFYQNK
NPNIAILSKCSINPSSKVFSTPNRLVNTFHDPKDLPLEKGFNFIEGGWGLFEGLRDKIDVLLLHSHASMISEAFNTLALK
TPFKGRLLHVQILENEALLWIENS

Sequences:

>Translated_344_residues
MRLYESLLEMCLNKAWEYQTLALENPSVACMVLDKNHEILSLETHKKAKTPHAEVLAAQSALKILRPSLKNDLEKLEDPK
TLSDFLKTRHDNAFTDCVFLITLEPCNSYGKTPACSELLEILKPKRVVIAAEENEAKKGGLARLQKAHIETMICRNLENK
AKDLLLPFRIMEQKGRFNLFKLALRMNGDYYHGKITGPKSVIFTHNQRAICDTLIVSGKTIRTDNPLLDTRFCDSFYQNK
NPNIAILSKCSINPSSKVFSTPNRLVNTFHDPKDLPLEKGFNFIEGGWGLFEGLRDKIDVLLLHSHASMISEAFNTLALK
TPFKGRLLHVQILENEALLWIENS
>Mature_344_residues
MRLYESLLEMCLNKAWEYQTLALENPSVACMVLDKNHEILSLETHKKAKTPHAEVLAAQSALKILRPSLKNDLEKLEDPK
TLSDFLKTRHDNAFTDCVFLITLEPCNSYGKTPACSELLEILKPKRVVIAAEENEAKKGGLARLQKAHIETMICRNLENK
AKDLLLPFRIMEQKGRFNLFKLALRMNGDYYHGKITGPKSVIFTHNQRAICDTLIVSGKTIRTDNPLLDTRFCDSFYQNK
NPNIAILSKCSINPSSKVFSTPNRLVNTFHDPKDLPLEKGFNFIEGGWGLFEGLRDKIDVLLLHSHASMISEAFNTLALK
TPFKGRLLHVQILENEALLWIENS

Specific function: Unknown

COG id: COG0117

COG function: function code H; Pyrimidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.26; 1.1.1.193

Molecular weight: Translated: 39047; Mature: 39047

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYESLLEMCLNKAWEYQTLALENPSVACMVLDKNHEILSLETHKKAKTPHAEVLAAQS
CCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHH
ALKILRPSLKNDLEKLEDPKTLSDFLKTRHDNAFTDCVFLITLEPCNSYGKTPACSELLE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHH
ILKPKRVVIAAEENEAKKGGLARLQKAHIETMICRNLENKAKDLLLPFRIMEQKGRFNLF
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
KLALRMNGDYYHGKITGPKSVIFTHNQRAICDTLIVSGKTIRTDNPLLDTRFCDSFYQNK
EEEEEECCCEEEEEECCCCEEEEECCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCC
NPNIAILSKCSINPSSKVFSTPNRLVNTFHDPKDLPLEKGFNFIEGGWGLFEGLRDKIDV
CCCEEEEEECCCCCCCCEECCCHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHEE
LLLHSHASMISEAFNTLALKTPFKGRLLHVQILENEALLWIENS
EEEEHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCEEEEEECC
>Mature Secondary Structure
MRLYESLLEMCLNKAWEYQTLALENPSVACMVLDKNHEILSLETHKKAKTPHAEVLAAQS
CCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHH
ALKILRPSLKNDLEKLEDPKTLSDFLKTRHDNAFTDCVFLITLEPCNSYGKTPACSELLE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHH
ILKPKRVVIAAEENEAKKGGLARLQKAHIETMICRNLENKAKDLLLPFRIMEQKGRFNLF
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
KLALRMNGDYYHGKITGPKSVIFTHNQRAICDTLIVSGKTIRTDNPLLDTRFCDSFYQNK
EEEEEECCCEEEEEECCCCEEEEECCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCC
NPNIAILSKCSINPSSKVFSTPNRLVNTFHDPKDLPLEKGFNFIEGGWGLFEGLRDKIDV
CCCEEEEEECCCCCCCCEECCCHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHEE
LLLHSHASMISEAFNTLALKTPFKGRLLHVQILENEALLWIENS
EEEEHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2,5-Diamino-6-hydroxy-4-(5'-phosphoribosylamino)-pyrimidine; H2O

Specific reaction: 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + H2O = 5-amino-6-(5-phosphoribosylamino)uracil + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA