| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is murB [H]
Identifier: 108563769
GI number: 108563769
Start: 1395353
End: 1396132
Strand: Reverse
Name: murB [H]
Synonym: HPAG1_1344
Alternate gene names: 108563769
Gene position: 1396132-1395353 (Counterclockwise)
Preceding gene: 108563770
Following gene: 108563764
Centisome position: 87.46
GC content: 42.31
Gene sequence:
>780_bases ATGCTAGAAAAAACCATTGATTTTTCTCGTTACAGCAGCGTGAAAATCGGCACGCCTTTAAAAGTGAGCGTTTTAGAAAA CGATAATGAAATCTCTCAAGAACACCAGATCATAGGCTTAGCGAACAACCTTTTAATCGCTCCTGGCGTGAAAAATCTCG CTTTATTAGGAAAAAACTATGATTATATTTGCGATCAAGGTGAGTGGGTGGAGGTAGGGGGAGCGGCCAATGCGTCTAAA ATCTTTAATTATTTTAGGGCGAATGGTTTAAAGGGTTTGGAGTTTTTAGGGCAATTGCCTGGCACTTTAGGGGCGTTAGT TAAAATGAATGCGGGCATGAAAGAATTTGAAATAAAAAATGTTTTAGAAAGCGCTTGTATTAATGGCGAATGGCTAGAAA AAGAGGCTTTGGGGCTGGGCTATCGCAGCAGCGGGTTTAGCGGCGTTGTGTTGAGAGCGAGATTTAAAAAAACGCATGGC TTTAGAGAAGAGGTTTTAAAAGCGTGTAAAAGCATGCGCAAAAGCCACCCCAAATTGCCTAATTTTGGGAGCTGTTTCAA AAACCCGCCTAACGATCATGCGGGCAGGCTTTTAGAGGGCGTGGGCTTAAGGGGTTATTGTCTAAAAAGAGTGGGCTTTG CCAAAGAGCATGCGAATTTTTTGGTGAATTTGGGGGGCGCGGAATTTGAAGAAGCCCTAGATCTGATAGAACTCGCCAAA GCTAGAGTGTTACAAGAATACGGCATTCATTTAGAAGAAGAAGTGAAGATTTTAAGGTAG
Upstream 100 bases:
>100_bases GATTGGGGTGCTGATTTTAACCATGCCGTGGATGACGAACATGCTTTTAGACTACACCCAAACCTTAATCAAGCTCATTC CTAAAATCATAGGCTAGAAA
Downstream 100 bases:
>100_bases GGTTGAAAGGCTTTATTAAAATCAATCTTACCCTAATTGATGAGAGTAGAGCCTTATTACTATTTAGTCCTATCATAATT CATGCTGCCATAACAAACAG
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase [H]
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MLEKTIDFSRYSSVKIGTPLKVSVLENDNEISQEHQIIGLANNLLIAPGVKNLALLGKNYDYICDQGEWVEVGGAANASK IFNYFRANGLKGLEFLGQLPGTLGALVKMNAGMKEFEIKNVLESACINGEWLEKEALGLGYRSSGFSGVVLRARFKKTHG FREEVLKACKSMRKSHPKLPNFGSCFKNPPNDHAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAK ARVLQEYGIHLEEEVKILR
Sequences:
>Translated_259_residues MLEKTIDFSRYSSVKIGTPLKVSVLENDNEISQEHQIIGLANNLLIAPGVKNLALLGKNYDYICDQGEWVEVGGAANASK IFNYFRANGLKGLEFLGQLPGTLGALVKMNAGMKEFEIKNVLESACINGEWLEKEALGLGYRSSGFSGVVLRARFKKTHG FREEVLKACKSMRKSHPKLPNFGSCFKNPPNDHAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAK ARVLQEYGIHLEEEVKILR >Mature_259_residues MLEKTIDFSRYSSVKIGTPLKVSVLENDNEISQEHQIIGLANNLLIAPGVKNLALLGKNYDYICDQGEWVEVGGAANASK IFNYFRANGLKGLEFLGQLPGTLGALVKMNAGMKEFEIKNVLESACINGEWLEKEALGLGYRSSGFSGVVLRARFKKTHG FREEVLKACKSMRKSHPKLPNFGSCFKNPPNDHAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAK ARVLQEYGIHLEEEVKILR
Specific function: Cell wall formation [H]
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the murB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR003170 - InterPro: IPR011601 [H]
Pfam domain/function: PF02873 MurB_C [H]
EC number: =1.1.1.158 [H]
Molecular weight: Translated: 28642; Mature: 28642
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKTIDFSRYSSVKIGTPLKVSVLENDNEISQEHQIIGLANNLLIAPGVKNLALLGKNY CCCCCCCHHHCCCEECCCCEEEEEECCCCHHHHHHHEEEECCCEEECCCCCHHHHCCCCC DYICDQGEWVEVGGAANASKIFNYFRANGLKGLEFLGQLPGTLGALVKMNAGMKEFEIKN CEEECCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHH VLESACINGEWLEKEALGLGYRSSGFSGVVLRARFKKTHGFREEVLKACKSMRKSHPKLP HHHHHHCCCCHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC NFGSCFKNPPNDHAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAK CCCHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHCCEEEECCCCCHHHHHHHHHHHH ARVLQEYGIHLEEEVKILR HHHHHHHCCCCHHHHHCCC >Mature Secondary Structure MLEKTIDFSRYSSVKIGTPLKVSVLENDNEISQEHQIIGLANNLLIAPGVKNLALLGKNY CCCCCCCHHHCCCEECCCCEEEEEECCCCHHHHHHHEEEECCCEEECCCCCHHHHCCCCC DYICDQGEWVEVGGAANASKIFNYFRANGLKGLEFLGQLPGTLGALVKMNAGMKEFEIKN CEEECCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHH VLESACINGEWLEKEALGLGYRSSGFSGVVLRARFKKTHGFREEVLKACKSMRKSHPKLP HHHHHHCCCCHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC NFGSCFKNPPNDHAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAK CCCHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHCCEEEECCCCCHHHHHHHHHHHH ARVLQEYGIHLEEEVKILR HHHHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]