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The map label for this gene is fliQ [H]

Identifier: 108563770

GI number: 108563770

Start: 1396136

End: 1396402

Strand: Reverse

Name: fliQ [H]

Synonym: HPAG1_1345

Alternate gene names: 108563770

Gene position: 1396402-1396136 (Counterclockwise)

Preceding gene: 108563771

Following gene: 108563769

Centisome position: 87.47

GC content: 40.45

Gene sequence:

>267_bases
ATGGAATCACAACTCATGAAACTCGCCATTGAGACTTATAAAATCACTTTGATGATTTCTTTACCGGTATTGCTAGCGGG
CTTGGTGGTGGGGCTATTAGTCAGTATTTTTCAAGCGACCACTCAAATCAATGAAATGACTTTGTCTTTTGTGCCTAAGA
TTTTAGCCGTGATTGGGGTGCTGATTTTAACCATGCCGTGGATGACGAACATGCTTTTAGACTACACCCAAACCTTAATC
AAGCTCATTCCTAAAATCATAGGCTAG

Upstream 100 bases:

>100_bases
GCTTTAATGGAGCAGTTTTTAGCGCAAGATGAAAACGCTTTGCAGCCTTTTGAACAAAGCTTTCAACAATTAGAAGAAAT
CTTAAGATAAAAGGAATGTT

Downstream 100 bases:

>100_bases
AAAATGCTAGAAAAAACCATTGATTTTTCTCGTTACAGCAGCGTGAAAATCGGCACGCCTTTAAAAGTGAGCGTTTTAGA
AAACGATAATGAAATCTCTC

Product: flagellar biosynthesis protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MESQLMKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGVLILTMPWMTNMLLDYTQTLI
KLIPKIIG

Sequences:

>Translated_88_residues
MESQLMKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGVLILTMPWMTNMLLDYTQTLI
KLIPKIIG
>Mature_88_residues
MESQLMKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGVLILTMPWMTNMLLDYTQTLI
KLIPKIIG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

Organism=Escherichia coli, GI1788260, Length=58, Percent_Identity=62.0689655172414, Blast_Score=66, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9762; Mature: 9762

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESQLMKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILTMPWMTNMLLDYTQTLIKLIPKIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MESQLMKLAIETYKITLMISLPVLLAGLVVGLLVSIFQATTQINEMTLSFVPKILAVIGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILTMPWMTNMLLDYTQTLIKLIPKIIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]