Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563758

Identifier: 108563758

GI number: 108563758

Start: 1382436

End: 1382618

Strand: Reverse

Name: 108563758

Synonym: HPAG1_1333

Alternate gene names: NA

Gene position: 1382618-1382436 (Counterclockwise)

Preceding gene: 108563764

Following gene: 108563757

Centisome position: 86.61

GC content: 31.15

Gene sequence:

>183_bases
TTGATTTCATTATTGATTGTTTTTGTTTGTTTAGGTTTGGTTTCAGTGTTGTTGGTTTGCTTTAGGTTTGCATGCTCTAA
ACCGATGAGAGGTTGTTTGAAGTCTTTCATGCTCATAAGAAAACGAGTTTGGTGGCAAAATAAAATCCAAAATCATAAAA
TAAAATCTGAAGCGATAAAATAA

Upstream 100 bases:

>100_bases
GAAGTCAAGCTCTTCATCGCTGATAATACTGCTCTTTTCAAGAGTGGGAATGTAGGTCGGTGCAGGGATAGGGAAATGTT
TTTTTAGTCTTGCTTTTTAT

Downstream 100 bases:

>100_bases
AACTTAAAATCATAACATAAGATCTAAAATCCAATTTTTTAGAAAGTTTAATATCTTTGGTGAGAAAAGAGTCTGCATCA
ATTAAACATGGATTTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MISLLIVFVCLGLVSVLLVCFRFACSKPMRGCLKSFMLIRKRVWWQNKIQNHKIKSEAIK

Sequences:

>Translated_60_residues
MISLLIVFVCLGLVSVLLVCFRFACSKPMRGCLKSFMLIRKRVWWQNKIQNHKIKSEAIK
>Mature_60_residues
MISLLIVFVCLGLVSVLLVCFRFACSKPMRGCLKSFMLIRKRVWWQNKIQNHKIKSEAIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7026; Mature: 7026

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
11.7 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
11.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLLIVFVCLGLVSVLLVCFRFACSKPMRGCLKSFMLIRKRVWWQNKIQNHKIKSEAIK
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISLLIVFVCLGLVSVLLVCFRFACSKPMRGCLKSFMLIRKRVWWQNKIQNHKIKSEAIK
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA