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The map label for this gene is 108563733

Identifier: 108563733

GI number: 108563733

Start: 1353739

End: 1355052

Strand: Reverse

Name: 108563733

Synonym: HPAG1_1308

Alternate gene names: NA

Gene position: 1355052-1353739 (Counterclockwise)

Preceding gene: 108563734

Following gene: 108563732

Centisome position: 84.88

GC content: 37.21

Gene sequence:

>1314_bases
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTATGGTGTGGGGTGTTTTTAAG
CCTTTTGTTGGCAATCAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCTTGAACG
CTCAAATCTTGTTGCAATACCCTAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTATGCGCAATTTTTTGGCAAAATCAAACCCTGCTC
GTTCTTAGAGTCTTTAAAATCATGCTTTTTTCAAACTTATTCTTTTTCTTTAACACGAAAACACAATTTCAAATCGCATT
GGCGCCATTTCATTGACAGCGCTCATTCAAGCGCTTTAGTGGGTAATTTGTATCGCGCGTTATTTATAGGGGATAGCTTG
AATAAAGATTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCAAGCGTGTATTTTCTTTTTTCGCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTGTTGCTACTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTCTTAAAACACACGGAAATTTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGCCATAAGCTTAAGC
GCGCTAGTGTTTTTGAACATGCTCATTATCGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGTATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCTGTGGGTTTGGGGTCTTTGTTGGATCACC
TTTTGAACATGCCTTTAACAATCCCCACGATTTCAATCCCTTCGCCTTTATGGCTTTTAGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGCTCAATTGTAGGTTAG

Upstream 100 bases:

>100_bases
CGCGCTTTAACGCTCCTTTCACGCGCTATGAAGACATGCCCATAGATTCCCATTTAGAAGAAAACCAAGAAACTAAAGTG
GATTATGATATAGTTACAAC

Downstream 100 bases:

>100_bases
AAAAGTCATTTTATTAGGGATCAAATAATTGCTTAAAAAAATCACGCACAAAATCAAAGCTTTAAGCGAATTGGTCGCTT
TGGAGCATACGATATTTTCT

Product: competence locus E

Products: NA

Alternate protein names: ComEC/Rec2-Related Protein; Integral Membrane Protein; DNA Transfer Protein ComE; DNA Uptake Protein; ComEC/Rec2 Family Protein; Inner Membrane Protein OxaA; Competence Protein; Comec/Rec2-Related Protein; Competence Locus E

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MKDKTFQGAFELLTTPKEYLWCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRYAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKHNFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTEIFFKTSSFLARSFQAISLS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHLLNMPLTIPTISIPSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSSIVG

Sequences:

>Translated_437_residues
MKDKTFQGAFELLTTPKEYLWCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRYAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKHNFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTEIFFKTSSFLARSFQAISLS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHLLNMPLTIPTISIPSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSSIVG
>Mature_437_residues
MKDKTFQGAFELLTTPKEYLWCGVFLSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRYAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKHNFKSHWRHFIDSAHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTEIFFKTSSFLARSFQAISLS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDHLLNMPLTIPTISIPSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSSIVG

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50287; Mature: 50287

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCHHHCC
>Mature Secondary Structure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HHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA