| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is trpG [H]
Identifier: 108563656
GI number: 108563656
Start: 1293406
End: 1293990
Strand: Direct
Name: trpG [H]
Synonym: HPAG1_1231
Alternate gene names: 108563656
Gene position: 1293406-1293990 (Clockwise)
Preceding gene: 108563655
Following gene: 108563657
Centisome position: 81.02
GC content: 38.8
Gene sequence:
>585_bases ATGAAAATCTTTTTTATAGATAATTTTGATTCTTTCTCTTATAATTTGGTGTATGAATTAGAGTGTTTGGGTTATGAAGT GGCCGTTTATCAAAACGATATTGATCCGAGTTATCTTATGGATTTGATGAATGAAGAATCAAAAACCCCTTTATTGTTCA TCTCACCCGGGCCTGGTAACCCTAATAGTTCAGGCAATCTTTTAAAAATCATTGAAATGGCTAAAAAGAAATTCCCTATT TTAGGGGTTTGTTTAGGCTTACAGGCTTTAGCACAAAGCTATGGGGCTAAAATCATAAGGAGTAAAGAAATCGTGCATGG CAAAGCGACCACTATCGCGCTCAAAAAGCATGCCGTTTTTAAAGGCTTAGGGGAGAGCATGGTGGTGGGGCGTTACCATT CTTTAATGGCGAGCGGGTTGCCTAAAAATTTAGAAGTGATCGCCGAGCATGACAACATCCCTATGGCTATTGTCAATGAA GAAGATAAAATTTTAGCCTATCAATTCCACCCTGAAAGCATCATGACTTTACAAGGGAGAGCGTTGTTAGAGCAAAGCGT GGGGTTTTTAGAAGGGTTATCATGA
Upstream 100 bases:
>100_bases CAGGAGCCGGTATCGTGTTAGACAGCGTGCCGCAAAACGAAGCGAATGAAACGAGAGCCAAAGCGCAAGCCCTTATTGAT GCGATCAGGAAAACAAGCTT
Downstream 100 bases:
>100_bases AAGAGATTTTAAACGCTCTGTATCATCAAAAAGACTTGAACGATGAAGAAGTCAAAAAATTATTCACCCTTATTATCCAC GAAAAAGTAAGCCCGGTGCA
Product: anthranilate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGNPNSSGNLLKIIEMAKKKFPI LGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLS
Sequences:
>Translated_194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGNPNSSGNLLKIIEMAKKKFPI LGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLS >Mature_194_residues MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGNPNSSGNLLKIIEMAKKKFPI LGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNE EDKILAYQFHPESIMTLQGRALLEQSVGFLEGLS
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=189, Percent_Identity=39.6825396825397, Blast_Score=162, Evalue=1e-41, Organism=Escherichia coli, GI1789760, Length=185, Percent_Identity=39.4594594594595, Blast_Score=130, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6322638, Length=198, Percent_Identity=37.3737373737374, Blast_Score=117, Evalue=9e-28, Organism=Saccharomyces cerevisiae, GI6323873, Length=108, Percent_Identity=37.962962962963, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 21486; Mature: 21486
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGN CEEEEEECCCCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCC PNSSGNLLKIIEMAKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVF CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEECCCEECCCEEEEEEHHHHHH KGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNEEDKILAYQFHPESIMTLQGR HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEECCH ALLEQSVGFLEGLS HHHHHHHHHHCCCC >Mature Secondary Structure MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMDLMNEESKTPLLFISPGPGN CEEEEEECCCCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCC PNSSGNLLKIIEMAKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIALKKHAVF CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEECCCEECCCEEEEEEHHHHHH KGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNEEDKILAYQFHPESIMTLQGR HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCEEEECCH ALLEQSVGFLEGLS HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]