Click here to switch to the map view.

The map label for this gene is 108563634

Identifier: 108563634

GI number: 108563634

Start: 1269534

End: 1270520

Strand: Direct

Name: 108563634

Synonym: HPAG1_1209

Alternate gene names: NA

Gene position: 1269534-1270520 (Clockwise)

Preceding gene: 108563633

Following gene: 108563635

Centisome position: 79.53

GC content: 36.37

Gene sequence:

>987_bases
TTGAGCGGCTTTAACCCCTTAAATTCTCCCTTAATCGCAAGCTCTTCAATTAGTTTGAAAGAAGCCTATTATTTAGAAAA
ATTATCTCTTAAAAAAGGGTTTAAAATCAATTACAAGATGACAAAAGATAGCTTAAACCTTTTAGAAAAAAGCGATTTGT
GCGTTTTGTTTGGGGGGTTTTCAAACGCTTGTTTGAATGAAAATGAACGATTGATTTTAGAAAACATTAACCAATCAAAA
CGCCCCTATGCCCTGTTAAGATCCTTACAAGATACAAGAGACTTGCAAGAAAATTGCCTTTTTGCGTCGTATGAAATCCA
CACGGAAGCGGCGATTTTGGCCTTGATTTTAAGGGGCATTTTAGAAAAAACTTCCCAATTAAAAGGGCATGTTTTAGAAA
AGGTTGATGTGGGGTATTTAAGCTCTGAAGCAAACATGAGCGAAGAAGAATTGCAAGAACTTATCGCTCTTATCATTAAA
GCGAAAAAAAGGGCGCTTGTTTTAAACAGAGAAATCACTAAACATGCTGACAACGCTTTTTTATACACCCTTTTAAACGA
GTTGCAAAACTATCTAGAAATTTTGCATATCCCTTGCAACGATTCAAACGCAACAACCGCTTTTTATGATTTTAAAGATC
AAGAATGGCTGCTAGAAACAGCCTTTAAAGAGGGCATTTTGCCTTTTAAATCGCAACTCCAATCAAAAGATTTAGAGTTT
TTAGAGCGAATGGGTGAGGCTAACGGCTCGTTTGTCTATGTTTCTTACAAGAGCCTTGAAACCCCCAAATTATCTTTTTC
CAAGCAATTTAAGATCGCTAATAAGATCCAGCATTCTAAGGCGGTGTTTCAAATCTTAAATAAAACGCTAGAATGCGAGT
TAGAAGAAAGCCCTAATTTAAAGGGCTTGATCGCGATTTTAGAAGGGGCGTTTTTTGACGCTTACCCTTATATCCCTATT
TTATCCCACTCTCAAGGAATTTCATGA

Upstream 100 bases:

>100_bases
AGAGCGCTGAATTTATCCAATCTAAAGGGCATGAGCTCCTCAATTCTTTGCGTTTCAATCAAGCGGATTGGACGATTGTC
GTGAGAAAAAAGGCTTGATT

Downstream 100 bases:

>100_bases
TCACAATGAATATCAATGGCAAAACGATTGAATGCCAAGAGGGACAAAGCGTTTTAGAGGCCGCTAGGAGCGCTGGGATC
TACATCCCTACCATTTGCTA

Product: NADH-ubiquinone oxidoreductase chain F

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase I Subunit F

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSGFNPLNSPLIASSSISLKEAYYLEKLSLKKGFKINYKMTKDSLNLLEKSDLCVLFGGFSNACLNENERLILENINQSK
RPYALLRSLQDTRDLQENCLFASYEIHTEAAILALILRGILEKTSQLKGHVLEKVDVGYLSSEANMSEEELQELIALIIK
AKKRALVLNREITKHADNAFLYTLLNELQNYLEILHIPCNDSNATTAFYDFKDQEWLLETAFKEGILPFKSQLQSKDLEF
LERMGEANGSFVYVSYKSLETPKLSFSKQFKIANKIQHSKAVFQILNKTLECELEESPNLKGLIAILEGAFFDAYPYIPI
LSHSQGIS

Sequences:

>Translated_328_residues
MSGFNPLNSPLIASSSISLKEAYYLEKLSLKKGFKINYKMTKDSLNLLEKSDLCVLFGGFSNACLNENERLILENINQSK
RPYALLRSLQDTRDLQENCLFASYEIHTEAAILALILRGILEKTSQLKGHVLEKVDVGYLSSEANMSEEELQELIALIIK
AKKRALVLNREITKHADNAFLYTLLNELQNYLEILHIPCNDSNATTAFYDFKDQEWLLETAFKEGILPFKSQLQSKDLEF
LERMGEANGSFVYVSYKSLETPKLSFSKQFKIANKIQHSKAVFQILNKTLECELEESPNLKGLIAILEGAFFDAYPYIPI
LSHSQGIS
>Mature_327_residues
SGFNPLNSPLIASSSISLKEAYYLEKLSLKKGFKINYKMTKDSLNLLEKSDLCVLFGGFSNACLNENERLILENINQSKR
PYALLRSLQDTRDLQENCLFASYEIHTEAAILALILRGILEKTSQLKGHVLEKVDVGYLSSEANMSEEELQELIALIIKA
KKRALVLNREITKHADNAFLYTLLNELQNYLEILHIPCNDSNATTAFYDFKDQEWLLETAFKEGILPFKSQLQSKDLEFL
ERMGEANGSFVYVSYKSLETPKLSFSKQFKIANKIQHSKAVFQILNKTLECELEESPNLKGLIAILEGAFFDAYPYIPIL
SHSQGIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3

Molecular weight: Translated: 37228; Mature: 37097

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFNPLNSPLIASSSISLKEAYYLEKLSLKKGFKINYKMTKDSLNLLEKSDLCVLFGGF
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEECCC
SNACLNENERLILENINQSKRPYALLRSLQDTRDLQENCLFASYEIHTEAAILALILRGI
CCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHH
LEKTSQLKGHVLEKVDVGYLSSEANMSEEELQELIALIIKAKKRALVLNREITKHADNAF
HHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LYTLLNELQNYLEILHIPCNDSNATTAFYDFKDQEWLLETAFKEGILPFKSQLQSKDLEF
HHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHCHHHH
LERMGEANGSFVYVSYKSLETPKLSFSKQFKIANKIQHSKAVFQILNKTLECELEESPNL
HHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCH
KGLIAILEGAFFDAYPYIPILSHSQGIS
HHHHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure 
SGFNPLNSPLIASSSISLKEAYYLEKLSLKKGFKINYKMTKDSLNLLEKSDLCVLFGGF
CCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEECCC
SNACLNENERLILENINQSKRPYALLRSLQDTRDLQENCLFASYEIHTEAAILALILRGI
CCHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHH
LEKTSQLKGHVLEKVDVGYLSSEANMSEEELQELIALIIKAKKRALVLNREITKHADNAF
HHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LYTLLNELQNYLEILHIPCNDSNATTAFYDFKDQEWLLETAFKEGILPFKSQLQSKDLEF
HHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHCHHHH
LERMGEANGSFVYVSYKSLETPKLSFSKQFKIANKIQHSKAVFQILNKTLECELEESPNL
HHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCH
KGLIAILEGAFFDAYPYIPILSHSQGIS
HHHHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA