| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is nuoG2 [H]
Identifier: 108563635
GI number: 108563635
Start: 1270517
End: 1273051
Strand: Direct
Name: nuoG2 [H]
Synonym: HPAG1_1210
Alternate gene names: 108563635
Gene position: 1270517-1273051 (Clockwise)
Preceding gene: 108563634
Following gene: 108563636
Centisome position: 79.59
GC content: 41.62
Gene sequence:
>2535_bases ATGATCACAATGAATATCAATGGCAAAACGATTGAATGCCAAGAGGGACAAAGCGTTTTAGAGGCCGCTAGGAGCGCTGG GATCTACATCCCTACCATTTGCTATTTAAGCGGTTGCTCGCCCACAGTCGCATGCAAAATGTGCATGGTTGAAATGGATG GCAAACGGGTTTATAGCTGCAACACGAAAGCCAAAAATAACGCCACCATTCTCACTAACACCCCAACGCTCATGGATGAA AGAAAAAGCATCATGCAAACTTATGATGTCAACCACCCCCTAGAGTGTGGCGTGTGCGATAAGAGCGGGGAGTGCGAATT GCAAGACATGACGCATTTAACTGGCGTAGAGCACCAACCTTATGCGGTGGCTGATGATTTTAAAGCGCTAGATTCATGGG CAAAAGCCTTGTATGATCCTAATTTGTGCATCATGTGCGAAAGGTGCGTAACCACTTGCAAGGACAATGTGGGCGAAAAC AACCTTAAAGCCACTAAAGCCGACTTGCATGCTCCGGATAAATTTAAAGACCGCATGTCCAAAGACGCTTTTAGCGTGTG GAGTCGCAAGCAAAAAGGCATTATTTCTTTTGTGGGCAGCGTGCCTTGTTATGATTGCGGGGAATGCATTGCGGTATGCC CTGTGGGCGCTTTGAGCTATAAAGATTTCGCTTACACGGCTAACGCATGGGAACTCAAAAAGATCCATTCTACTTGTTCG CATTGCTCAGCTGGGTGTTTGATTTCTTATGATGTGCGCCATTTTGATACTCTAGGCGAAGAATCTAAGATTTTTAGGGT GCTTAATGATTTTTACCATAACCCTATTTGTGGGGCAGGCCGTTTCGCTTTTGACGTGAGCTCTAGCCCTAAAGGCAGCA CTAATCTTAAAGAAGCGCAAAACGCCCTCAAAGAATGCGAAGCGGTGCGAATAGGTGGGGATATTACGAATGAAGAGGCG TTTTTAATAGAGCGTTTGAGGAAAGAGCTTGATTTTAAAATCTACAATCAAGAAGTGTATCATTTCCAGCAATTCTTAAA AGTATTGGGCGAAGTTAAACGCCCCAATATTGAAGAGATTAAAACTTCCAATTTGGTCGTTACGATAGGATCTTCTATCA AAACAGAAAACCCTTTGGTGCGCTATGCCATCAATAACGCTCTCAAACTCAATAAAGCTTCTTTGATCGCTATGCACCCT ATTAAGGATAATGCGTTAGCGAATTTGTGTCGAAGCTCTTTTTGCATCACCCATGAAGTGGGGGCTGAAGAAATCCTTTT AGGCATGCTTTTAAAAATGCTTAACATTGAAAGCGCAGCTCTAAAAAGCTTAGAAGATTCCAAGCAAAGCATTGTGGATG AAGCGGCTCTTAAAGCCTTAGAAGAAGAGCGAAAAAAAGCTTTAGAACAAGCCGAGCAAGGGTGCAGTATTGGAGAAAAT AAGGCAGAAAATCAAGAAGAGGATAAAATAGAAGCAACTACCCCAAAAGAAGAAAATCCAGAAGAAAACAAGACAGAGGT TAAAGAAGAAAAAATTGAAGTCCCTACCAAAACCACTTATTTGTTGCTTGAAGAAGCGGGCATCAATTTAGAAACTTATG AAAAAATTCTCGCTCTTTTGCAAAAATCAAATAACACCTTGCTGGTGGTTGGCGAAGAAATTTATAGCCACAAACAAGCC CACAATATCGCTAAAATGTTGCGTTTGTTAGCCCAAAAAAGCGCTGTTAAACTCATTCTTATCCCTCCAAGCGCGAACGC TTTAGGCATCGCTTCTATTTGTCAATTGAGCGAAGAAATTTTTGAACATGAAAAAATCGTAGGCATTCGCGCTCAAGGGG ATTTCACTATCAATAGCGATGATAGGGTTTTTGGGAAAGACGCTCTCAGCAAAGTGGATTTTATTTTGCCCAGTCTCAAT CAGCTAGAAGGCACGATCACCAATGTTGAAGGGCGTGTGTTGCCCTTAAAACCGGCTTTGAGGTTTGAGGGCTATGACTT GAGCGATATTATGCAAGGCTTTGGCTTTGTGGAAGAAAATCTCACAGAATGCACCCACAAACTCCCTACAGAAGCGGGCT TTAAAGCCATAGAATTTGATTATTTAACCAACTATTTCACTAACGACAGGGTCAATCACAGAGGCTATCTGCTAAGAGCA AGCCCTTTTGAAAAAAGCGCTAAAGAATGCGAAACCATAGAATGCGAGCCTATCAAGCCTTTAAAAGAAAAAATCGCTTT CAACGCGTATTTAAAATACCCAGAAACGCAATTCAATAACGCTACTAATAAAAGCGAGAATTTGCAATTAAAAGCCGGTG TCTATGTGTCTAAAGCTTTCTTAAAAAAATTGAATAAAGAAGTGGGGCAAAACATCACTTTATCTAAAGAAGAAGAGGAA TTAACAGGCGTTTTGTATCTTGATGAAAGCTTGGATCAGGAAGTGTTTGTCATCTCGCCTTCTCTTTTGAAAAACCATTC TGGCTTTTTTAGAGAGAGCGTGTTTGATAGCGTGGATTTAAAGGAGCAAGCATGA
Upstream 100 bases:
>100_bases AAGAAAGCCCTAATTTAAAGGGCTTGATCGCGATTTTAGAAGGGGCGTTTTTTGACGCTTACCCTTATATCCCTATTTTA TCCCACTCTCAAGGAATTTC
Downstream 100 bases:
>100_bases GCGCTTATATCATTGAAACCCTGATTAAAATTTTGATTTTAGTCGCTGTTTTTTCGGCTTTAGGAGGCTTTGCCACTTAT ATTGAAAGGAAAGTGTTAGC
Product: NADH dehydrogenase subunit G
Products: NA
Alternate protein names: NADH dehydrogenase I subunit G 2; NDH-1 subunit G 2 [H]
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MITMNINGKTIECQEGQSVLEAARSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILTNTPTLMDE RKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGEN NLKATKADLHAPDKFKDRMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVGALSYKDFAYTANAWELKKIHSTCS HCSAGCLISYDVRHFDTLGEESKIFRVLNDFYHNPICGAGRFAFDVSSSPKGSTNLKEAQNALKECEAVRIGGDITNEEA FLIERLRKELDFKIYNQEVYHFQQFLKVLGEVKRPNIEEIKTSNLVVTIGSSIKTENPLVRYAINNALKLNKASLIAMHP IKDNALANLCRSSFCITHEVGAEEILLGMLLKMLNIESAALKSLEDSKQSIVDEAALKALEEERKKALEQAEQGCSIGEN KAENQEEDKIEATTPKEENPEENKTEVKEEKIEVPTKTTYLLLEEAGINLETYEKILALLQKSNNTLLVVGEEIYSHKQA HNIAKMLRLLAQKSAVKLILIPPSANALGIASICQLSEEIFEHEKIVGIRAQGDFTINSDDRVFGKDALSKVDFILPSLN QLEGTITNVEGRVLPLKPALRFEGYDLSDIMQGFGFVEENLTECTHKLPTEAGFKAIEFDYLTNYFTNDRVNHRGYLLRA SPFEKSAKECETIECEPIKPLKEKIAFNAYLKYPETQFNNATNKSENLQLKAGVYVSKAFLKKLNKEVGQNITLSKEEEE LTGVLYLDESLDQEVFVISPSLLKNHSGFFRESVFDSVDLKEQA
Sequences:
>Translated_844_residues MITMNINGKTIECQEGQSVLEAARSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILTNTPTLMDE RKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGEN NLKATKADLHAPDKFKDRMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVGALSYKDFAYTANAWELKKIHSTCS HCSAGCLISYDVRHFDTLGEESKIFRVLNDFYHNPICGAGRFAFDVSSSPKGSTNLKEAQNALKECEAVRIGGDITNEEA FLIERLRKELDFKIYNQEVYHFQQFLKVLGEVKRPNIEEIKTSNLVVTIGSSIKTENPLVRYAINNALKLNKASLIAMHP IKDNALANLCRSSFCITHEVGAEEILLGMLLKMLNIESAALKSLEDSKQSIVDEAALKALEEERKKALEQAEQGCSIGEN KAENQEEDKIEATTPKEENPEENKTEVKEEKIEVPTKTTYLLLEEAGINLETYEKILALLQKSNNTLLVVGEEIYSHKQA HNIAKMLRLLAQKSAVKLILIPPSANALGIASICQLSEEIFEHEKIVGIRAQGDFTINSDDRVFGKDALSKVDFILPSLN QLEGTITNVEGRVLPLKPALRFEGYDLSDIMQGFGFVEENLTECTHKLPTEAGFKAIEFDYLTNYFTNDRVNHRGYLLRA SPFEKSAKECETIECEPIKPLKEKIAFNAYLKYPETQFNNATNKSENLQLKAGVYVSKAFLKKLNKEVGQNITLSKEEEE LTGVLYLDESLDQEVFVISPSLLKNHSGFFRESVFDSVDLKEQA >Mature_844_residues MITMNINGKTIECQEGQSVLEAARSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSCNTKAKNNATILTNTPTLMDE RKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQPYAVADDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGEN NLKATKADLHAPDKFKDRMSKDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVGALSYKDFAYTANAWELKKIHSTCS HCSAGCLISYDVRHFDTLGEESKIFRVLNDFYHNPICGAGRFAFDVSSSPKGSTNLKEAQNALKECEAVRIGGDITNEEA FLIERLRKELDFKIYNQEVYHFQQFLKVLGEVKRPNIEEIKTSNLVVTIGSSIKTENPLVRYAINNALKLNKASLIAMHP IKDNALANLCRSSFCITHEVGAEEILLGMLLKMLNIESAALKSLEDSKQSIVDEAALKALEEERKKALEQAEQGCSIGEN KAENQEEDKIEATTPKEENPEENKTEVKEEKIEVPTKTTYLLLEEAGINLETYEKILALLQKSNNTLLVVGEEIYSHKQA HNIAKMLRLLAQKSAVKLILIPPSANALGIASICQLSEEIFEHEKIVGIRAQGDFTINSDDRVFGKDALSKVDFILPSLN QLEGTITNVEGRVLPLKPALRFEGYDLSDIMQGFGFVEENLTECTHKLPTEAGFKAIEFDYLTNYFTNDRVNHRGYLLRA SPFEKSAKECETIECEPIKPLKEKIAFNAYLKYPETQFNNATNKSENLQLKAGVYVSKAFLKKLNKEVGQNITLSKEEEE LTGVLYLDESLDQEVFVISPSLLKNHSGFFRESVFDSVDLKEQA
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1034
COG function: function code C; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI33519475, Length=294, Percent_Identity=28.5714285714286, Blast_Score=118, Evalue=2e-26, Organism=Escherichia coli, GI145693161, Length=441, Percent_Identity=24.9433106575964, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17565758, Length=293, Percent_Identity=29.0102389078498, Blast_Score=105, Evalue=8e-23, Organism=Caenorhabditis elegans, GI32566231, Length=293, Percent_Identity=29.0102389078498, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI193209088, Length=245, Percent_Identity=29.7959183673469, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI24640559, Length=430, Percent_Identity=24.4186046511628, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24640557, Length=430, Percent_Identity=24.4186046511628, Blast_Score=103, Evalue=3e-22,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR009010 - InterPro: IPR012675 - InterPro: IPR001041 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR000283 - InterPro: IPR019574 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding; PF10588 NADH-G_4Fe-4S_3 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 94329; Mature: 94329
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS51085 2FE2S_FER_2 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITMNINGKTIECQEGQSVLEAARSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSC CEEEECCCCEEECCCCHHHHHHHHHCCCEEEHHHEECCCCHHHHHHHHHEEECCCEEEEE NTKAKNNATILTNTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQP CCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC YAVADDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENNLKATKADLHAPDKFKDRMS CCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCEECHHCCCCCHHHHHHHH KDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVGALSYKDFAYTANAWELKKIHSTCS HHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHH HCSAGCLISYDVRHFDTLGEESKIFRVLNDFYHNPICGAGRFAFDVSSSPKGSTNLKEAQ HCCCCCEEEECHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHH NALKECEAVRIGGDITNEEAFLIERLRKELDFKIYNQEVYHFQQFLKVLGEVKRPNIEEI HHHHHCCEEEECCCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHH KTSNLVVTIGSSIKTENPLVRYAINNALKLNKASLIAMHPIKDNALANLCRSSFCITHEV CCCCEEEEECCCCCCCCCEEEEECCCHHEECCCEEEEECCCCCHHHHHHHHHCCEEEECC GAEEILLGMLLKMLNIESAALKSLEDSKQSIVDEAALKALEEERKKALEQAEQGCSIGEN CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KAENQEEDKIEATTPKEENPEENKTEVKEEKIEVPTKTTYLLLEEAGINLETYEKILALL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHH QKSNNTLLVVGEEIYSHKQAHNIAKMLRLLAQKSAVKLILIPPSANALGIASICQLSEEI HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH FEHEKIVGIRAQGDFTINSDDRVFGKDALSKVDFILPSLNQLEGTITNVEGRVLPLKPAL HHHHHEEEEEECCCEEECCCCCCCCHHHHHHHHHHHCCHHHHCCEEECCCCEEEECCCCC RFEGYDLSDIMQGFGFVEENLTECTHKLPTEAGFKAIEFDYLTNYFTNDRVNHRGYLLRA EECCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEEC SPFEKSAKECETIECEPIKPLKEKIAFNAYLKYPETQFNNATNKSENLQLKAGVYVSKAF CCCHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCCHHCCCCCCCCCCEEEECCHHHHHHH LKKLNKEVGQNITLSKEEEELTGVLYLDESLDQEVFVISPSLLKNHSGFFRESVFDSVDL HHHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCEEEEECHHHHHCCCCHHHHHHHCCCCC KEQA CCCC >Mature Secondary Structure MITMNINGKTIECQEGQSVLEAARSAGIYIPTICYLSGCSPTVACKMCMVEMDGKRVYSC CEEEECCCCEEECCCCHHHHHHHHHCCCEEEHHHEECCCCHHHHHHHHHEEECCCEEEEE NTKAKNNATILTNTPTLMDERKSIMQTYDVNHPLECGVCDKSGECELQDMTHLTGVEHQP CCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC YAVADDFKALDSWAKALYDPNLCIMCERCVTTCKDNVGENNLKATKADLHAPDKFKDRMS CCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCEECHHCCCCCHHHHHHHH KDAFSVWSRKQKGIISFVGSVPCYDCGECIAVCPVGALSYKDFAYTANAWELKKIHSTCS HHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHH HCSAGCLISYDVRHFDTLGEESKIFRVLNDFYHNPICGAGRFAFDVSSSPKGSTNLKEAQ HCCCCCEEEECHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHH NALKECEAVRIGGDITNEEAFLIERLRKELDFKIYNQEVYHFQQFLKVLGEVKRPNIEEI HHHHHCCEEEECCCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHH KTSNLVVTIGSSIKTENPLVRYAINNALKLNKASLIAMHPIKDNALANLCRSSFCITHEV CCCCEEEEECCCCCCCCCEEEEECCCHHEECCCEEEEECCCCCHHHHHHHHHCCEEEECC GAEEILLGMLLKMLNIESAALKSLEDSKQSIVDEAALKALEEERKKALEQAEQGCSIGEN CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KAENQEEDKIEATTPKEENPEENKTEVKEEKIEVPTKTTYLLLEEAGINLETYEKILALL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHH QKSNNTLLVVGEEIYSHKQAHNIAKMLRLLAQKSAVKLILIPPSANALGIASICQLSEEI HCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH FEHEKIVGIRAQGDFTINSDDRVFGKDALSKVDFILPSLNQLEGTITNVEGRVLPLKPAL HHHHHEEEEEECCCEEECCCCCCCCHHHHHHHHHHHCCHHHHCCEEECCCCEEEECCCCC RFEGYDLSDIMQGFGFVEENLTECTHKLPTEAGFKAIEFDYLTNYFTNDRVNHRGYLLRA EECCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEEC SPFEKSAKECETIECEPIKPLKEKIAFNAYLKYPETQFNNATNKSENLQLKAGVYVSKAF CCCHHHHHHCCCCCCCCCCHHHHHHHHHHEECCCCHHCCCCCCCCCCEEEECCHHHHHHH LKKLNKEVGQNITLSKEEEELTGVLYLDESLDQEVFVISPSLLKNHSGFFRESVFDSVDL HHHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCEEEEECHHHHHCCCCHHHHHHHCCCCC KEQA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481432 [H]