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The map label for this gene is glyQ [H]

Identifier: 108563369

GI number: 108563369

Start: 984659

End: 985555

Strand: Reverse

Name: glyQ [H]

Synonym: HPAG1_0944

Alternate gene names: 108563369

Gene position: 985555-984659 (Counterclockwise)

Preceding gene: 108563370

Following gene: 108563368

Centisome position: 61.74

GC content: 42.03

Gene sequence:

>897_bases
ATGCAAGATTTTTCAAGTTTATTATTAAAATTACAAGAGTATTGGAAGAATCAAGGCTGTTTGGTGATCCAGCCTTATGA
TATTCCTGCAGGAGCTGGGACATTCCACCCCGCCACGCTTTTAAGGAGTTTGGATAAAAAGCCGTGGAATGTGGCGTATG
TCGCGCCCTCTAGAAGGCCTACTGATGGGCGCTATGGGGAAAACCCTAACCGCTTGGGGAGTTATTACCAATTCCAAGTC
GTCATCAAGCCAAGCCCTTCTAATATCCAAGAAATGTATTTAAAAAGCTTGGAAGTGTTAGGGATAAACCTTAATGAGCA
TGATATACGATTTGTAGAAGACAATTGGGAGAGTCCGACTTTAGGGGCATGGGGGCTTGGCTGGGAAGTGTGGCTTGATG
GCATGGAGGTTACGCAATTCACTTATTTCCAGCAAGTGGGGGGCATTCCTTGCAGCCCTATTCCGGTAGAAATCACTTAC
GGCTTAGAAAGATTAGCGATGTATGTCCAAAAAGTGGAAAATATCCTAGAGATTGAATGGGCGAAAAACAACCATGACAG
CGTGCGTTATGCGCAAGTGCATTTAGAAAGCGAATATCAATTCAGCAAGTATCATTTTGAAATAGCGAGCGTGAGAAGGC
TATTAGAAATGTTTAAAAACGCACAAGCTGAAGCCTTGCATTGCTTGGAAAACAAGCTCCCCTTACCGGCTTATGATTTC
GTGATGCTATGCTCGCATTTTTTCAATATTTTAGACGCTAGAAAGGCGATTTCAGTGGCTGAAAGGCAAAATTATATTTT
ACAAATTAGGGATTTAGCCAAAGGGTGTGCCGTTCTTTATAAAGAGCAAGAAAAAGAAAGAGAAGAGCGTTTAAAAAACG
CTCTAACAAAGGCTTAA

Upstream 100 bases:

>100_bases
TATACGCCCATTGCGAGCGAATTAGCCTTGCTTTTAAAGGGTAAGAGTGTGCTAGAGAGCATGAACGATTTGATCAGACG
CGCTTAAAAGGAAAGAGAGC

Downstream 100 bases:

>100_bases
AATGGCGTTAGTTAAGGAAGTGTTGGCAGTTTTGAACCGCCTTTCGCCTTTTGAACTCCAAGAATCATGGGATAATAGCG
GGTTGAATGTAGGGAGTGAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQV
VIKPSPSNIQEMYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGIPCSPIPVEITY
GLERLAMYVQKVENILEIEWAKNNHDSVRYAQVHLESEYQFSKYHFEIASVRRLLEMFKNAQAEALHCLENKLPLPAYDF
VMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEKEREERLKNALTKA

Sequences:

>Translated_298_residues
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQV
VIKPSPSNIQEMYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGIPCSPIPVEITY
GLERLAMYVQKVENILEIEWAKNNHDSVRYAQVHLESEYQFSKYHFEIASVRRLLEMFKNAQAEALHCLENKLPLPAYDF
VMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEKEREERLKNALTKA
>Mature_298_residues
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQV
VIKPSPSNIQEMYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGIPCSPIPVEITY
GLERLAMYVQKVENILEIEWAKNNHDSVRYAQVHLESEYQFSKYHFEIASVRRLLEMFKNAQAEALHCLENKLPLPAYDF
VMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEKEREERLKNALTKA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=279, Percent_Identity=60.9318996415771, Blast_Score=353, Evalue=8e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34546; Mature: 34546

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRP
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCC
TDGRYGENPNRLGSYYQFQVVIKPSPSNIQEMYLKSLEVLGINLNEHDIRFVEDNWESPT
CCCCCCCCHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCC
LGAWGLGWEVWLDGMEVTQFTYFQQVGGIPCSPIPVEITYGLERLAMYVQKVENILEIEW
CCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEEE
AKNNHDSVRYAQVHLESEYQFSKYHFEIASVRRLLEMFKNAQAEALHCLENKLPLPAYDF
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
VMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEKEREERLKNALTKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDFSSLLLKLQEYWKNQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRP
CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCC
TDGRYGENPNRLGSYYQFQVVIKPSPSNIQEMYLKSLEVLGINLNEHDIRFVEDNWESPT
CCCCCCCCHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHEEECCCCCCEEEEECCCCCCC
LGAWGLGWEVWLDGMEVTQFTYFQQVGGIPCSPIPVEITYGLERLAMYVQKVENILEIEW
CCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEEE
AKNNHDSVRYAQVHLESEYQFSKYHFEIASVRRLLEMFKNAQAEALHCLENKLPLPAYDF
CCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHH
VMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEKEREERLKNALTKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]