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The map label for this gene is 108563368

Identifier: 108563368

GI number: 108563368

Start: 983926

End: 984657

Strand: Reverse

Name: 108563368

Synonym: HPAG1_0943

Alternate gene names: NA

Gene position: 984657-983926 (Counterclockwise)

Preceding gene: 108563369

Following gene: 108563367

Centisome position: 61.68

GC content: 38.66

Gene sequence:

>732_bases
ATGGCGTTAGTTAAGGAAGTGTTGGCAGTTTTGAACCGCCTTTCGCCTTTTGAACTCCAAGAATCATGGGATAATAGCGG
GTTGAATGTAGGGAGTGAAAATAGCGAGTTTAGCGAGATTGTCGCATGTTTAGAAATCACGCTTCAAATCGCTCTAAACG
CGCCACAAAACGCCCTAATCATCACGCACCACCCTTTAATTTTCAAGCCCTTAAAAACGCTTAATAATGAGGCTTATCCG
GGCAATATTTTAAAAATCTTAATCCAAAAAAACATTTCAGTCATCAGCATGCACACGAATTTTGACAAAACGCATTTAAA
CAAGCATTTTGCACACGCGCTTTTAGGGTTTGATAACTTGATGGAAAAAGGCCTTATGTTAGTGAAAGAAAACGCTAATA
TAGAATTTGATGCGTTGGTGAAAAAAATCAAATCTTCTTTAGGGGTGGGATCCTTAGCGTGTGTCAAAAGTTCTCAAACC
ATTAAAGATTTAGCGTTTGTGTGCGGATCGGGAGCGTCCATGTTCTCTTCTTTAAAAGCGCAAAGCTGTTTGATTACAGG
CGATGTGAAATACCATGACGCTATGATCGCTCAATCTTTAGGGATAAGTTTGATTGACGCCACGCATTATTATAGCGAAA
GGGGTTTTGCGCTGATTGTGGCTGAAATTTTGCATTCTTTTAATTATTTGGTTACAATAGAGAATTTTAAAAACCCCTTG
CAAATCATTTAA

Upstream 100 bases:

>100_bases
TTACAAATTAGGGATTTAGCCAAAGGGTGTGCCGTTCTTTATAAAGAGCAAGAAAAAGAAAGAGAAGAGCGTTTAAAAAA
CGCTCTAACAAAGGCTTAAA

Downstream 100 bases:

>100_bases
AGGAAAGCGATGAACACCCACCTCAAACAATTGATTGAAATTTCGCATTTGGATAAAGAAATTGACTCCCTAGAGCCATT
GATCAGAGAAAAACGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MALVKEVLAVLNRLSPFELQESWDNSGLNVGSENSEFSEIVACLEITLQIALNAPQNALIITHHPLIFKPLKTLNNEAYP
GNILKILIQKNISVISMHTNFDKTHLNKHFAHALLGFDNLMEKGLMLVKENANIEFDALVKKIKSSLGVGSLACVKSSQT
IKDLAFVCGSGASMFSSLKAQSCLITGDVKYHDAMIAQSLGISLIDATHYYSERGFALIVAEILHSFNYLVTIENFKNPL
QII

Sequences:

>Translated_243_residues
MALVKEVLAVLNRLSPFELQESWDNSGLNVGSENSEFSEIVACLEITLQIALNAPQNALIITHHPLIFKPLKTLNNEAYP
GNILKILIQKNISVISMHTNFDKTHLNKHFAHALLGFDNLMEKGLMLVKENANIEFDALVKKIKSSLGVGSLACVKSSQT
IKDLAFVCGSGASMFSSLKAQSCLITGDVKYHDAMIAQSLGISLIDATHYYSERGFALIVAEILHSFNYLVTIENFKNPL
QII
>Mature_242_residues
ALVKEVLAVLNRLSPFELQESWDNSGLNVGSENSEFSEIVACLEITLQIALNAPQNALIITHHPLIFKPLKTLNNEAYPG
NILKILIQKNISVISMHTNFDKTHLNKHFAHALLGFDNLMEKGLMLVKENANIEFDALVKKIKSSLGVGSLACVKSSQTI
KDLAFVCGSGASMFSSLKAQSCLITGDVKYHDAMIAQSLGISLIDATHYYSERGFALIVAEILHSFNYLVTIENFKNPLQ
II

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 26758; Mature: 26627

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVKEVLAVLNRLSPFELQESWDNSGLNVGSENSEFSEIVACLEITLQIALNAPQNALI
CHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEE
ITHHPLIFKPLKTLNNEAYPGNILKILIQKNISVISMHTNFDKTHLNKHFAHALLGFDNL
EEECCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
MEKGLMLVKENANIEFDALVKKIKSSLGVGSLACVKSSQTIKDLAFVCGSGASMFSSLKA
HHHCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHH
QSCLITGDVKYHDAMIAQSLGISLIDATHYYSERGFALIVAEILHSFNYLVTIENFKNPL
CCEEEECCCHHHHHHHHHHHCCEEEHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCC
QII
CCC
>Mature Secondary Structure 
ALVKEVLAVLNRLSPFELQESWDNSGLNVGSENSEFSEIVACLEITLQIALNAPQNALI
HHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEE
ITHHPLIFKPLKTLNNEAYPGNILKILIQKNISVISMHTNFDKTHLNKHFAHALLGFDNL
EEECCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
MEKGLMLVKENANIEFDALVKKIKSSLGVGSLACVKSSQTIKDLAFVCGSGASMFSSLKA
HHHCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHH
QSCLITGDVKYHDAMIAQSLGISLIDATHYYSERGFALIVAEILHSFNYLVTIENFKNPL
CCEEEECCCHHHHHHHHHHHCCEEEHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCC
QII
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]