Click here to switch to the map view.

The map label for this gene is 108563261

Identifier: 108563261

GI number: 108563261

Start: 872157

End: 872696

Strand: Reverse

Name: 108563261

Synonym: HPAG1_0836

Alternate gene names: NA

Gene position: 872696-872157 (Counterclockwise)

Preceding gene: 108563262

Following gene: 108563260

Centisome position: 54.67

GC content: 37.41

Gene sequence:

>540_bases
ATGAAACCACGAGATATTGGAATCATTCAAAGCGTTTTAGAGATTACAGGACCTATTAAGGTTACTGAGATTTATGATAA
AGCTAAAGAGCTTTTTGAAAAAGGCAAGATTGAAAACATGTTTGATTATGGGGGCGAAACCCCACACCAGAGCGTTAGTT
CTTATATTTATACAGCCTTAAACAAGGGCGAAGAGCTGCCTTTTAAAAAAGTGCAAGAAAAACCAGTTTTAATCGCTTTA
AAAGATGCGGCTAAAGAGCTGGGCTTAAACGCTCAAAAAATAAGCATTCCAAGCGTTCCAATCGCGCATGAAAGGGATTT
GCACCCCTTTTTAACTTACATGGCTATTAATAACGAAAATTTGAAATGCTACACGAAAACCATTTTTCATGAAGAGAGTT
CAAAATCGCCAAAAGGCATGGACAGGTGGCTTTATCCGGACATGGTGGGGGTTAGGTTTTTGCACGCTGAATTATCCAAT
GAAAATTTAATCGCTTTTTCTAAGAAATTTGACACTTTACCCGTTAAAGCTTTGAATTGA

Upstream 100 bases:

>100_bases
ATGCGTATGCTAATAGGATTATTGAATTAGTCCCAGGCCCTAAAGGCGCTTCAATCATTGATTTTAAAGGCAGTTATGAA
GAGTATTTAGCGAGCAAAAA

Downstream 100 bases:

>100_bases
AAAAAGAAATCAGCGTGCATAATTGCAGGGAGTGTTATTTTCAAGCGATTTCTAACAGCTCGTGGGCTAATGAGGGGTAT
TTAGTGGGCCGTCATATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Excinuclease ATPase Subunit

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKPRDIGIIQSVLEITGPIKVTEIYDKAKELFEKGKIENMFDYGGETPHQSVSSYIYTALNKGEELPFKKVQEKPVLIAL
KDAAKELGLNAQKISIPSVPIAHERDLHPFLTYMAINNENLKCYTKTIFHEESSKSPKGMDRWLYPDMVGVRFLHAELSN
ENLIAFSKKFDTLPVKALN

Sequences:

>Translated_179_residues
MKPRDIGIIQSVLEITGPIKVTEIYDKAKELFEKGKIENMFDYGGETPHQSVSSYIYTALNKGEELPFKKVQEKPVLIAL
KDAAKELGLNAQKISIPSVPIAHERDLHPFLTYMAINNENLKCYTKTIFHEESSKSPKGMDRWLYPDMVGVRFLHAELSN
ENLIAFSKKFDTLPVKALN
>Mature_179_residues
MKPRDIGIIQSVLEITGPIKVTEIYDKAKELFEKGKIENMFDYGGETPHQSVSSYIYTALNKGEELPFKKVQEKPVLIAL
KDAAKELGLNAQKISIPSVPIAHERDLHPFLTYMAINNENLKCYTKTIFHEESSKSPKGMDRWLYPDMVGVRFLHAELSN
ENLIAFSKKFDTLPVKALN

Specific function: Unknown

COG id: COG2958

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20327; Mature: 20327

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRDIGIIQSVLEITGPIKVTEIYDKAKELFEKGKIENMFDYGGETPHQSVSSYIYTAL
CCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHH
NKGEELPFKKVQEKPVLIALKDAAKELGLNAQKISIPSVPIAHERDLHPFLTYMAINNEN
CCCCCCCHHHHCCCCEEEEEHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC
LKCYTKTIFHEESSKSPKGMDRWLYPDMVGVRFLHAELSNENLIAFSKKFDTLPVKALN
CEEEEHEEHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECC
>Mature Secondary Structure
MKPRDIGIIQSVLEITGPIKVTEIYDKAKELFEKGKIENMFDYGGETPHQSVSSYIYTAL
CCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHH
NKGEELPFKKVQEKPVLIALKDAAKELGLNAQKISIPSVPIAHERDLHPFLTYMAINNEN
CCCCCCCHHHHCCCCEEEEEHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC
LKCYTKTIFHEESSKSPKGMDRWLYPDMVGVRFLHAELSNENLIAFSKKFDTLPVKALN
CEEEEHEEHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA