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The map label for this gene is hpaA [H]

Identifier: 108563207

GI number: 108563207

Start: 821979

End: 822761

Strand: Reverse

Name: hpaA [H]

Synonym: HPAG1_0782

Alternate gene names: 108563207

Gene position: 822761-821979 (Counterclockwise)

Preceding gene: 108563208

Following gene: 108563206

Centisome position: 51.54

GC content: 38.19

Gene sequence:

>783_bases
ATGAAAGCAAATAATCATTTTAAAGATTTTGCATGGAAAAAATGCCTTTTAGGTGCGAGCGTGGTGGCTTTGTTAGTGGG
ATGCAGCCCGCATATTATTGAAACCAATGAAGTCGCTTTGAAGTTGAATTACCATCCAGCGAGCGAGAAAGTTCAAGCGT
TAGATGAAAAGATTTTGCTTTTAAGGCCAGCTTTTCAATACAGCGATAATATTGCTAAAGAGTATGAAAACAAATTCAAG
AATCAAACCACGCTTAAGGTTGAACAGATTTTGCAAAATCAGGGCTATAAGGTTATTAATGTGGATAGCAGCGATAAAGA
TGATTTTTCTTTTGCGCAAAAAAAAGAAGGGTATTTGGCCGTCGCTATGAACGGCGAAATTGTTTTACGCCCCGATCCTA
AAAGGACCATACAGAAAAAATCAGAACCCGGGTTATTATTCTCCACTGGTTTGGATAAAATGGAAGGGGTTTTAATCCCG
GCCGGGTTTGTCAAGGTTACCATACTAGAGCCTATGAGTGGGGAATCTTTGGATTCTTTTACGATGGATTTGAGCGAGTT
GGACATTCAAGAAAAATTCTTAAAAACCACCCATTCAAGCCATAGCGGGGGGTTAGTTAGCACTATGGTTAAGGGAACGG
ATAATTCTAATGATGCGATCAAGAGCGCTTTGAACAAGATTTTTGCAAATATCATGCAAGAAATAGACAAAAAACTCACT
CAAAAGAATTTAGAATCTTATCAAAAAGACGCCAAGGAATTAAAAGGCAAAAGAAACCGATAA

Upstream 100 bases:

>100_bases
AATCTAAAGATGTTAGGGTAAAATAACATTTTGACAACAAAAGCGTGTTGGTTGGTTTGTTGTTATAGAAGTCTAAAATA
TTACAATCAAGGATAGAACG

Downstream 100 bases:

>100_bases
AGACAAATAACGCATAAGAAAAGAACGCTTGAACAAACTGCTTAAAAAGGGTTTTTAGCGTTCTTTTTGAGCGTGTATTT
AAGGGCTGATGATCTGGTTA

Product: flagellar sheath adhesin

Products: NA

Alternate protein names: N-acetylneuraminyllactose-binding fibrillar hemagglutinin receptor-binding subunit; NLBH [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKANNHFKDFAWKKCLLGASVVALLVGCSPHIIETNEVALKLNYHPASEKVQALDEKILLLRPAFQYSDNIAKEYENKFK
NQTTLKVEQILQNQGYKVINVDSSDKDDFSFAQKKEGYLAVAMNGEIVLRPDPKRTIQKKSEPGLLFSTGLDKMEGVLIP
AGFVKVTILEPMSGESLDSFTMDLSELDIQEKFLKTTHSSHSGGLVSTMVKGTDNSNDAIKSALNKIFANIMQEIDKKLT
QKNLESYQKDAKELKGKRNR

Sequences:

>Translated_260_residues
MKANNHFKDFAWKKCLLGASVVALLVGCSPHIIETNEVALKLNYHPASEKVQALDEKILLLRPAFQYSDNIAKEYENKFK
NQTTLKVEQILQNQGYKVINVDSSDKDDFSFAQKKEGYLAVAMNGEIVLRPDPKRTIQKKSEPGLLFSTGLDKMEGVLIP
AGFVKVTILEPMSGESLDSFTMDLSELDIQEKFLKTTHSSHSGGLVSTMVKGTDNSNDAIKSALNKIFANIMQEIDKKLT
QKNLESYQKDAKELKGKRNR
>Mature_260_residues
MKANNHFKDFAWKKCLLGASVVALLVGCSPHIIETNEVALKLNYHPASEKVQALDEKILLLRPAFQYSDNIAKEYENKFK
NQTTLKVEQILQNQGYKVINVDSSDKDDFSFAQKKEGYLAVAMNGEIVLRPDPKRTIQKKSEPGLLFSTGLDKMEGVLIP
AGFVKVTILEPMSGESLDSFTMDLSELDIQEKFLKTTHSSHSGGLVSTMVKGTDNSNDAIKSALNKIFANIMQEIDKKLT
QKNLESYQKDAKELKGKRNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007876 [H]

Pfam domain/function: PF05211 NLBH [H]

EC number: NA

Molecular weight: Translated: 29116; Mature: 29116

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANNHFKDFAWKKCLLGASVVALLVGCSPHIIETNEVALKLNYHPASEKVQALDEKILL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHEE
LRPAFQYSDNIAKEYENKFKNQTTLKVEQILQNQGYKVINVDSSDKDDFSFAQKKEGYLA
ECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCEEE
VAMNGEIVLRPDPKRTIQKKSEPGLLFSTGLDKMEGVLIPAGFVKVTILEPMSGESLDSF
EEECCEEEECCCCHHHHHCCCCCCEEEECCCHHHCCEEEECCEEEEEEECCCCCCCHHHH
TMDLSELDIQEKFLKTTHSSHSGGLVSTMVKGTDNSNDAIKSALNKIFANIMQEIDKKLT
HHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKNLESYQKDAKELKGKRNR
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKANNHFKDFAWKKCLLGASVVALLVGCSPHIIETNEVALKLNYHPASEKVQALDEKILL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHEE
LRPAFQYSDNIAKEYENKFKNQTTLKVEQILQNQGYKVINVDSSDKDDFSFAQKKEGYLA
ECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCCCCEEE
VAMNGEIVLRPDPKRTIQKKSEPGLLFSTGLDKMEGVLIPAGFVKVTILEPMSGESLDSF
EEECCEEEECCCCHHHHHCCCCCCEEEECCCHHHCCEEEECCEEEEEEECCCCCCCHHHH
TMDLSELDIQEKFLKTTHSSHSGGLVSTMVKGTDNSNDAIKSALNKIFANIMQEIDKKLT
HHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKNLESYQKDAKELKGKRNR
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678592; 7557486 [H]