Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563206

Identifier: 108563206

GI number: 108563206

Start: 821118

End: 821912

Strand: Reverse

Name: 108563206

Synonym: HPAG1_0781

Alternate gene names: NA

Gene position: 821912-821118 (Counterclockwise)

Preceding gene: 108563207

Following gene: 108563205

Centisome position: 51.49

GC content: 38.24

Gene sequence:

>795_bases
TTGAGCGTGTATTTAAGGGCTGATGATCTGGTTACTTACACCATCATCAAAAAAGAAGATCTAGGATTCCAGCGGTTTTT
AGCAAAGAAGTGTTTAAGGGGCAAAGCCCCTCCATGTTTTGCTGAGCCTAAAAAACCCAAAAAAAAACTTTTTAATATAG
ACAAAAGCTCCCACTATTATGGCACAAGCGTGGTGCAAATGTCATGGCTACAGAGTAGGGAAAGATTTGAAAACCATTCA
AAATACCGAGACATTCCTTTTGCTGAAGTCAGTTTGATTTATGGCTATAAACAATTTTTTCCTAAAAAAGAGCGCTACGG
CTTCCGTTTTTATGTCTCTTTGGATTACGCTTATGGGTTTTTTCTTAAAAATAAGGGCGTGTTGGGCGATAGTTTGAGGG
AGAGTTCGCAGATCCCTAAAAGCTATAGAGAAAAATTGCAAAGAAAAGAGACTTTTATTAACGCTATTTTTTATGGCGCA
GGAGCTGACTTTTTATACAAACGCGCTTTTGGAACGCTGATTTTAGGGATGAATTTCGTGGGCGAAACCTGGTTTTATGA
AACAAAGATTTTTAAAAAGTGGGCTAAAGATCCTTTGAGCGTTTATCACCCTTACATGTTTCAAGTGATGCTGAATGTGG
GGTATCGTTACCGCTTTTCAAGGTATAAGAATTGGGCGATAGAATTGGGCGCGCGCATCCCCTTTTTAACCAATGATTAT
TTTAAAACCCCTTTATACACCCTTCATTTCAAGCGCAATATTTCTGTCTATCTCACTTCAACTTATGACTTTTAG

Upstream 100 bases:

>100_bases
CGCCAAGGAATTAAAAGGCAAAAGAAACCGATAAAGACAAATAACGCATAAGAAAAGAACGCTTGAACAAACTGCTTAAA
AAGGGTTTTTAGCGTTCTTT

Downstream 100 bases:

>100_bases
TTTTTTAAATTTTTGAAAACTAGAATTAAAACCGCTTTTTATAAACCGGAATTAAAACAAATTAAGCTATAATGATACAA
AAATTTAATTTTTTAGCCAT

Product: outer membrane protein HorG

Products: NA

Alternate protein names: Outer Membrane Protein HorG

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSVYLRADDLVTYTIIKKEDLGFQRFLAKKCLRGKAPPCFAEPKKPKKKLFNIDKSSHYYGTSVVQMSWLQSRERFENHS
KYRDIPFAEVSLIYGYKQFFPKKERYGFRFYVSLDYAYGFFLKNKGVLGDSLRESSQIPKSYREKLQRKETFINAIFYGA
GADFLYKRAFGTLILGMNFVGETWFYETKIFKKWAKDPLSVYHPYMFQVMLNVGYRYRFSRYKNWAIELGARIPFLTNDY
FKTPLYTLHFKRNISVYLTSTYDF

Sequences:

>Translated_264_residues
MSVYLRADDLVTYTIIKKEDLGFQRFLAKKCLRGKAPPCFAEPKKPKKKLFNIDKSSHYYGTSVVQMSWLQSRERFENHS
KYRDIPFAEVSLIYGYKQFFPKKERYGFRFYVSLDYAYGFFLKNKGVLGDSLRESSQIPKSYREKLQRKETFINAIFYGA
GADFLYKRAFGTLILGMNFVGETWFYETKIFKKWAKDPLSVYHPYMFQVMLNVGYRYRFSRYKNWAIELGARIPFLTNDY
FKTPLYTLHFKRNISVYLTSTYDF
>Mature_263_residues
SVYLRADDLVTYTIIKKEDLGFQRFLAKKCLRGKAPPCFAEPKKPKKKLFNIDKSSHYYGTSVVQMSWLQSRERFENHSK
YRDIPFAEVSLIYGYKQFFPKKERYGFRFYVSLDYAYGFFLKNKGVLGDSLRESSQIPKSYREKLQRKETFINAIFYGAG
ADFLYKRAFGTLILGMNFVGETWFYETKIFKKWAKDPLSVYHPYMFQVMLNVGYRYRFSRYKNWAIELGARIPFLTNDYF
KTPLYTLHFKRNISVYLTSTYDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31558; Mature: 31427

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYLRADDLVTYTIIKKEDLGFQRFLAKKCLRGKAPPCFAEPKKPKKKLFNIDKSSHYY
CEEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCC
GTSVVQMSWLQSRERFENHSKYRDIPFAEVSLIYGYKQFFPKKERYGFRFYVSLDYAYGF
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECEEEE
FLKNKGVLGDSLRESSQIPKSYREKLQRKETFINAIFYGAGADFLYKRAFGTLILGMNFV
EEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GETWFYETKIFKKWAKDPLSVYHPYMFQVMLNVGYRYRFSRYKNWAIELGARIPFLTNDY
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCEEEEECCCCCEEECCC
FKTPLYTLHFKRNISVYLTSTYDF
CCCCEEEEEEECCEEEEEEEECCC
>Mature Secondary Structure 
SVYLRADDLVTYTIIKKEDLGFQRFLAKKCLRGKAPPCFAEPKKPKKKLFNIDKSSHYY
EEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCC
GTSVVQMSWLQSRERFENHSKYRDIPFAEVSLIYGYKQFFPKKERYGFRFYVSLDYAYGF
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECEEEE
FLKNKGVLGDSLRESSQIPKSYREKLQRKETFINAIFYGAGADFLYKRAFGTLILGMNFV
EEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GETWFYETKIFKKWAKDPLSVYHPYMFQVMLNVGYRYRFSRYKNWAIELGARIPFLTNDY
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEHHHHCCEEEEECCCCCEEECCC
FKTPLYTLHFKRNISVYLTSTYDF
CCCCEEEEEEECCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA