Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563177

Identifier: 108563177

GI number: 108563177

Start: 786690

End: 788240

Strand: Reverse

Name: 108563177

Synonym: HPAG1_0752

Alternate gene names: NA

Gene position: 788240-786690 (Counterclockwise)

Preceding gene: 108563178

Following gene: 108563176

Centisome position: 49.38

GC content: 42.55

Gene sequence:

>1551_bases
ATGAAAAAAGATCGAGAAAAAAAACAAAAATACAACAACATTACAGACGCAACCATCATGGGTTCAACTGGCGAAGAGAG
TGCACTTCATGCTAGTGCTAATAGAGAGCATTTTTCTGCCTGGGATAGATTAGAAGAGATCTCAAAAAGGAAGATAAACC
CTAACTATATTAAACAAAATATCAACCAACAGGCGGGGTATTCTGCTGAAATCAAAGAGCAAGCCCATGTTAATGCGCAT
AATATCCTTGCAGGAAAAAGAGAAAGGATAGTGCAGTATGACAATCTTTCTAGCGGGCAAAAGGCTCAGGTTAAAAAGCT
TTTCCCAAACTATGCCACGCCCAAGAAGAATCACGAAATCGTGGATTATGCCAGTGTGGATGAAAAGGGGAATGTCATTC
CTGGCACGCTCACGCAAAGTAAATTTGTGGGCAGAAATGGTGAGGAGTGTTTTAAAAAACTCTTATCTAAAGACTATGAA
AAATACTTTGAAAACGGTGCGAAGATGAAAATCGCTAGGAATCATTATGGGGATTTTCAAAGAGCGGTCAATACTAGGAT
CAAGAGCCTAGAATCTCAAATCGCTAAACAAAAGGGGCTTGGCGATTTTCAAAAAGCCGCTCATTTAGAGGAAAAACTCC
AAAAATGCAAAACAATCAAAGCCCATACAAGGCCTGCGAGTACCACTAAAGCAGAGGCGATTGAAGCCAGATTGAACCCA
AATCTCTCCACTGCCAAAGATGTTACCAGCATTTCGCATCAAGCAGGAATGAACGCCGCACAAACCGGTGCGTGGATAGG
TGGTTGGGTCTCACTCGTAACGAATGTTTATGAATGTATCGCAAATGGCAAGGATCCTATGAAGGCGATCAAGCACACCG
CCATTGCTACCCTAAAGGGTGGAGTGCTTAGTTATTGTAGCGCGTTTGCAAGCTCATCTTTGGGAGGTTTGGTGCAAAGC
AGCGCTAATAGAATCATCCAAAGCCTTGGCAAGGGCTCAGCACCTGCGATGATTGTGGGTGCTTGTGTGGCAAATGCTAC
GGTTTTAACTCGCTATTTTTCTGGAAAGATTGATGGAACAGAGCTTTGCAAACAACTTGTGAAAGCTAACACCACTCTTG
TAAGTAGTGGGGCTATGGCAGTTGCTGGGCAAGCGCTCATCCCTATTCCTGTGGTTGGGGCGTTGGTTGGGGGCTTTGTG
GGCGCAGTGTTGAGCGAAACTTGTTTTAACGCCCTTCTAAAGGCTCGTGAAGAGGCTAAATTGGCACGCCAAAGGCGTAT
TGAGATTGAAAGAGAATGCCGTGAAATCATCAAGCTGTTAGAGACATATCAAAATCAATTTAAGGAGGTGTTTGAGAAAT
ATTTTCATGAAACTACAAAGTTTTTCAATCAGAGTTTTGATGATCTGGAGAGGGCGCTTTATGCGGGCGATGCGGATTTG
GCTATAGCAGTCAATAACAAATCCCGAGAATGGTTGGGTCAAAAGGCGTTATTTGATAATAAACAAGAAAGTTGGGAATT
GATTATTAGTAATAAAGACATAAGAATGTAA

Upstream 100 bases:

>100_bases
TTTATCCCTAGTCTTTCGGGGGGGGGGTTACTTATAAGCCTACCCTAAAATCCCCAAAATTTCTCGCTTTTTTTAAATCT
TTCTTTTTTGGAGTTGAGTC

Downstream 100 bases:

>100_bases
AGGAGAAAAACATGGATAAAAATAGAGTTCATGCGATTATAGCTAATGCGGTAGAAAGTGGTGGCTCTTTTAGCTCAAGC
GATCGATCAAAATTCGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MKKDREKKQKYNNITDATIMGSTGEESALHASANREHFSAWDRLEEISKRKINPNYIKQNINQQAGYSAEIKEQAHVNAH
NILAGKRERIVQYDNLSSGQKAQVKKLFPNYATPKKNHEIVDYASVDEKGNVIPGTLTQSKFVGRNGEECFKKLLSKDYE
KYFENGAKMKIARNHYGDFQRAVNTRIKSLESQIAKQKGLGDFQKAAHLEEKLQKCKTIKAHTRPASTTKAEAIEARLNP
NLSTAKDVTSISHQAGMNAAQTGAWIGGWVSLVTNVYECIANGKDPMKAIKHTAIATLKGGVLSYCSAFASSSLGGLVQS
SANRIIQSLGKGSAPAMIVGACVANATVLTRYFSGKIDGTELCKQLVKANTTLVSSGAMAVAGQALIPIPVVGALVGGFV
GAVLSETCFNALLKAREEAKLARQRRIEIERECREIIKLLETYQNQFKEVFEKYFHETTKFFNQSFDDLERALYAGDADL
AIAVNNKSREWLGQKALFDNKQESWELIISNKDIRM

Sequences:

>Translated_516_residues
MKKDREKKQKYNNITDATIMGSTGEESALHASANREHFSAWDRLEEISKRKINPNYIKQNINQQAGYSAEIKEQAHVNAH
NILAGKRERIVQYDNLSSGQKAQVKKLFPNYATPKKNHEIVDYASVDEKGNVIPGTLTQSKFVGRNGEECFKKLLSKDYE
KYFENGAKMKIARNHYGDFQRAVNTRIKSLESQIAKQKGLGDFQKAAHLEEKLQKCKTIKAHTRPASTTKAEAIEARLNP
NLSTAKDVTSISHQAGMNAAQTGAWIGGWVSLVTNVYECIANGKDPMKAIKHTAIATLKGGVLSYCSAFASSSLGGLVQS
SANRIIQSLGKGSAPAMIVGACVANATVLTRYFSGKIDGTELCKQLVKANTTLVSSGAMAVAGQALIPIPVVGALVGGFV
GAVLSETCFNALLKAREEAKLARQRRIEIERECREIIKLLETYQNQFKEVFEKYFHETTKFFNQSFDDLERALYAGDADL
AIAVNNKSREWLGQKALFDNKQESWELIISNKDIRM
>Mature_516_residues
MKKDREKKQKYNNITDATIMGSTGEESALHASANREHFSAWDRLEEISKRKINPNYIKQNINQQAGYSAEIKEQAHVNAH
NILAGKRERIVQYDNLSSGQKAQVKKLFPNYATPKKNHEIVDYASVDEKGNVIPGTLTQSKFVGRNGEECFKKLLSKDYE
KYFENGAKMKIARNHYGDFQRAVNTRIKSLESQIAKQKGLGDFQKAAHLEEKLQKCKTIKAHTRPASTTKAEAIEARLNP
NLSTAKDVTSISHQAGMNAAQTGAWIGGWVSLVTNVYECIANGKDPMKAIKHTAIATLKGGVLSYCSAFASSSLGGLVQS
SANRIIQSLGKGSAPAMIVGACVANATVLTRYFSGKIDGTELCKQLVKANTTLVSSGAMAVAGQALIPIPVVGALVGGFV
GAVLSETCFNALLKAREEAKLARQRRIEIERECREIIKLLETYQNQFKEVFEKYFHETTKFFNQSFDDLERALYAGDADL
AIAVNNKSREWLGQKALFDNKQESWELIISNKDIRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57095; Mature: 57095

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDREKKQKYNNITDATIMGSTGEESALHASANREHFSAWDRLEEISKRKINPNYIKQN
CCCHHHHHHHHCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
INQQAGYSAEIKEQAHVNAHNILAGKRERIVQYDNLSSGQKAQVKKLFPNYATPKKNHEI
CHHHCCCCHHHHHHHCCCHHHHHHCCHHHHEECCCCCCCCHHHHHHHCCCCCCCCCCCCE
VDYASVDEKGNVIPGTLTQSKFVGRNGEECFKKLLSKDYEKYFENGAKMKIARNHYGDFQ
EEECCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH
RAVNTRIKSLESQIAKQKGLGDFQKAAHLEEKLQKCKTIKAHTRPASTTKAEAIEARLNP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
NLSTAKDVTSISHQAGMNAAQTGAWIGGWVSLVTNVYECIANGKDPMKAIKHTAIATLKG
CCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GVLSYCSAFASSSLGGLVQSSANRIIQSLGKGSAPAMIVGACVANATVLTRYFSGKIDGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
ELCKQLVKANTTLVSSGAMAVAGQALIPIPVVGALVGGFVGAVLSETCFNALLKAREEAK
HHHHHHHHCCCHHEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARQRRIEIERECREIIKLLETYQNQFKEVFEKYFHETTKFFNQSFDDLERALYAGDADL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCE
AIAVNNKSREWLGQKALFDNKQESWELIISNKDIRM
EEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKKDREKKQKYNNITDATIMGSTGEESALHASANREHFSAWDRLEEISKRKINPNYIKQN
CCCHHHHHHHHCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
INQQAGYSAEIKEQAHVNAHNILAGKRERIVQYDNLSSGQKAQVKKLFPNYATPKKNHEI
CHHHCCCCHHHHHHHCCCHHHHHHCCHHHHEECCCCCCCCHHHHHHHCCCCCCCCCCCCE
VDYASVDEKGNVIPGTLTQSKFVGRNGEECFKKLLSKDYEKYFENGAKMKIARNHYGDFQ
EEECCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH
RAVNTRIKSLESQIAKQKGLGDFQKAAHLEEKLQKCKTIKAHTRPASTTKAEAIEARLNP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
NLSTAKDVTSISHQAGMNAAQTGAWIGGWVSLVTNVYECIANGKDPMKAIKHTAIATLKG
CCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GVLSYCSAFASSSLGGLVQSSANRIIQSLGKGSAPAMIVGACVANATVLTRYFSGKIDGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
ELCKQLVKANTTLVSSGAMAVAGQALIPIPVVGALVGGFVGAVLSETCFNALLKAREEAK
HHHHHHHHCCCHHEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARQRRIEIERECREIIKLLETYQNQFKEVFEKYFHETTKFFNQSFDDLERALYAGDADL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCE
AIAVNNKSREWLGQKALFDNKQESWELIISNKDIRM
EEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA