| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563176
Identifier: 108563176
GI number: 108563176
Start: 786417
End: 786632
Strand: Reverse
Name: 108563176
Synonym: HPAG1_0751
Alternate gene names: NA
Gene position: 786632-786417 (Counterclockwise)
Preceding gene: 108563177
Following gene: 108563175
Centisome position: 49.28
GC content: 42.59
Gene sequence:
>216_bases GTGGTGGCTCTTTTAGCTCAAGCGATCGATCAAAATTCGCATAAGCCGCTAGAATGCATGGGATTGAAGACAGCGTTATT GAAGAGGTTATTGACATCACTCAGACCATTAGTCTTATCCATCTCCATGAAGATCGGCTTGATGCAAGCGATTTGCCAAG AGAACAAAAGAAAACCATGCGCGTTGAGCTCCAAAAAAGCATTGATGAAAATCTAG
Upstream 100 bases:
>100_bases AAGTTGGGAATTGATTATTAGTAATAAAGACATAAGAATGTAAAGGAGAAAAACATGGATAAAAATAGAGTTCATGCGAT TATAGCTAATGCGGTAGAAA
Downstream 100 bases:
>100_bases AAGTTTTAAAAAAATCATAAACATTTAAAGGAGAAAAACATGCCATTACCATTTATTTTAGCTGGAGTAGCCCTAGCGGC GGCAGGATACGGAGTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MVALLAQAIDQNSHKPLECMGLKTALLKRLLTSLRPLVLSISMKIGLMQAICQENKRKPCALSSKKALMKI
Sequences:
>Translated_71_residues MVALLAQAIDQNSHKPLECMGLKTALLKRLLTSLRPLVLSISMKIGLMQAICQENKRKPCALSSKKALMKI >Mature_71_residues MVALLAQAIDQNSHKPLECMGLKTALLKRLLTSLRPLVLSISMKIGLMQAICQENKRKPCALSSKKALMKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7833; Mature: 7833
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALLAQAIDQNSHKPLECMGLKTALLKRLLTSLRPLVLSISMKIGLMQAICQENKRKPC CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ALSSKKALMKI CCCCHHHHHCC >Mature Secondary Structure MVALLAQAIDQNSHKPLECMGLKTALLKRLLTSLRPLVLSISMKIGLMQAICQENKRKPC CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ALSSKKALMKI CCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA