Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563140

Identifier: 108563140

GI number: 108563140

Start: 752960

End: 754678

Strand: Reverse

Name: 108563140

Synonym: HPAG1_0715

Alternate gene names: NA

Gene position: 754678-752960 (Counterclockwise)

Preceding gene: 108563141

Following gene: 108563139

Centisome position: 47.27

GC content: 37.11

Gene sequence:

>1719_bases
ATGAATGAAACGCTAGAACAATTTAAAGCAAACCAAAAGAGGAATCAAGAAAATCTTAAAAAATTGCTTGATTTTATCCA
TACTGGAGAGAAATACGGAATCCAGATTGAAGAGTCCCTCAAAGACAAAATCCGTAATGCGATAAAAAATGTTGCCGATC
AGAAACTGAAAGTGGCTTTAGTGGGAGGTTTTTCTGAAGGAAAAACATCTATAGCGGCAGCTTGGATCGATCGCTTGGAT
GAGAGCATGAAGATAGACCACAAAGAATCCAGCGATGCAGTTAAAATCTATGACATAGACAATGAAATGGAGCTGGTTGA
TACCCCGGGATTATTCGGGTTCAAACAAAAAGAACACGATAGCGGCAAAATAGAGCACTATAAAGATATTACCAAAAAAT
ATGTCAGCGAAGCCCATCTCATTTTATACGCGCTCAACCCGTCAAACCCTATCAAAGAAAGCCATAAGGACGATTTGAAT
TGGTTGTTCAGGACGCTCAATCTTTTATCTAGGACGATTTTTGTCATCAGCCGTTTTGATGAAGAAGCGGATATTGAAGA
TGAACAAGATTACAACAAAAGATTTAAAATCAAAAAAGAAAACATTCAAAACCGACTGAATGAGCTGATTTCTTTAAGCG
AAGAAGAAAAAGAAAGTTTGATTATTGTCGCTGTTGCGGCAAACCCTTTTGATTTGGGGGTGGAACACTGGCTAAAGCAT
CAAGAAGAATTCCAGAAACTCTCACACATCAAAACTTTGCAAGACGCGACGCAAAAAAAGATTGAAGAAAATGGCGGGAA
ATTAACCATCATAGAAGAAGCCAAAAAAAGCGTCATTCAAGATGTTATCTATAGGCAAATGCCGCTTGCAAAAAAAGAGC
AACAAGAGATTAAGAGAGAAATGGAATATTTGAATAAAACGCTTGAAAAAAGGCGAAAAGAGATTCAAAATTTAAATAGT
GAAATTTCTCAAGCCCGCATTTATTTAAGAGAATTTATAACGAGGTATTTTAGCGATCTCATCGCTCAAGTTTCTGGCAC
CAGCCTAGAAACCTTTAATGATTTTGTTATTAGAGAAATAGGCGATGAAGGTATTAATATAGACACAAGAGTCCAAAATG
CATTTGAAAGAGAAACGCAAGGGATCTTCAATGAAATTTCTAAAATTGAAACGATTTTTAACGCCGATAGGAGTTTTTTT
GAAAAACATGCCGGAGCGTTGGGGAAAATTGGAATCAATTTTTTAAATCAAAGCGGTTTTATCAATGCAACTAACATCAA
ACTGGCTAGAGACACGATAGCGGCTGCGGGAAAATTTGTGGGCATAGATTGGGCTTTGAAATTCAAACCTTGGGGCGCTG
TAAAATTGGCAGGCAATTTGAACAAATTTTTACCGCTTATTGGTCTTGCTTTTGAAATGTGGGATTCTTGGAAAGAAAGC
CAAAAAATAGAAAAACTTGAAAAAGCTAAAGGAGAAATGGAATCTAATTTTGACGGACAAAAACAAGAAATCTTGGATCT
CATCAACGATGAAACCAGATTCAAACAAACATGTTTCCCAATGGCGTTGGAACTGGAAAAATGCATTCAAGAATGCGAAG
AAAGCGTTAAAAAAACGCAAGAGTGCGCTCAAGGTCTGGAAAAATGGATTCAAACTGGCGAGGATTTCATCAAGGGCGAA
GATTTTATAGAAGTTGAGCCTGAAAGAGGCATGAACTGA

Upstream 100 bases:

>100_bases
TTTGTTACGAGCGCATGAGGGAAGGGCTAATAAAGGCCGGTGAAGACTTATGGCACTTAGATAATCGCATCAAAACCACA
TTAAAACAAAGGATCGCGCA

Downstream 100 bases:

>100_bases
ATTTGTGTTAAAATACCGAATGTGCCAACGCTAGAACGCTTGCTAGTTTTTGGCTAGTAAGCGGTGTTTTAAATCTTTTA
AAGGAAAAGCGATGTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MNETLEQFKANQKRNQENLKKLLDFIHTGEKYGIQIEESLKDKIRNAIKNVADQKLKVALVGGFSEGKTSIAAAWIDRLD
ESMKIDHKESSDAVKIYDIDNEMELVDTPGLFGFKQKEHDSGKIEHYKDITKKYVSEAHLILYALNPSNPIKESHKDDLN
WLFRTLNLLSRTIFVISRFDEEADIEDEQDYNKRFKIKKENIQNRLNELISLSEEEKESLIIVAVAANPFDLGVEHWLKH
QEEFQKLSHIKTLQDATQKKIEENGGKLTIIEEAKKSVIQDVIYRQMPLAKKEQQEIKREMEYLNKTLEKRRKEIQNLNS
EISQARIYLREFITRYFSDLIAQVSGTSLETFNDFVIREIGDEGINIDTRVQNAFERETQGIFNEISKIETIFNADRSFF
EKHAGALGKIGINFLNQSGFINATNIKLARDTIAAAGKFVGIDWALKFKPWGAVKLAGNLNKFLPLIGLAFEMWDSWKES
QKIEKLEKAKGEMESNFDGQKQEILDLINDETRFKQTCFPMALELEKCIQECEESVKKTQECAQGLEKWIQTGEDFIKGE
DFIEVEPERGMN

Sequences:

>Translated_572_residues
MNETLEQFKANQKRNQENLKKLLDFIHTGEKYGIQIEESLKDKIRNAIKNVADQKLKVALVGGFSEGKTSIAAAWIDRLD
ESMKIDHKESSDAVKIYDIDNEMELVDTPGLFGFKQKEHDSGKIEHYKDITKKYVSEAHLILYALNPSNPIKESHKDDLN
WLFRTLNLLSRTIFVISRFDEEADIEDEQDYNKRFKIKKENIQNRLNELISLSEEEKESLIIVAVAANPFDLGVEHWLKH
QEEFQKLSHIKTLQDATQKKIEENGGKLTIIEEAKKSVIQDVIYRQMPLAKKEQQEIKREMEYLNKTLEKRRKEIQNLNS
EISQARIYLREFITRYFSDLIAQVSGTSLETFNDFVIREIGDEGINIDTRVQNAFERETQGIFNEISKIETIFNADRSFF
EKHAGALGKIGINFLNQSGFINATNIKLARDTIAAAGKFVGIDWALKFKPWGAVKLAGNLNKFLPLIGLAFEMWDSWKES
QKIEKLEKAKGEMESNFDGQKQEILDLINDETRFKQTCFPMALELEKCIQECEESVKKTQECAQGLEKWIQTGEDFIKGE
DFIEVEPERGMN
>Mature_572_residues
MNETLEQFKANQKRNQENLKKLLDFIHTGEKYGIQIEESLKDKIRNAIKNVADQKLKVALVGGFSEGKTSIAAAWIDRLD
ESMKIDHKESSDAVKIYDIDNEMELVDTPGLFGFKQKEHDSGKIEHYKDITKKYVSEAHLILYALNPSNPIKESHKDDLN
WLFRTLNLLSRTIFVISRFDEEADIEDEQDYNKRFKIKKENIQNRLNELISLSEEEKESLIIVAVAANPFDLGVEHWLKH
QEEFQKLSHIKTLQDATQKKIEENGGKLTIIEEAKKSVIQDVIYRQMPLAKKEQQEIKREMEYLNKTLEKRRKEIQNLNS
EISQARIYLREFITRYFSDLIAQVSGTSLETFNDFVIREIGDEGINIDTRVQNAFERETQGIFNEISKIETIFNADRSFF
EKHAGALGKIGINFLNQSGFINATNIKLARDTIAAAGKFVGIDWALKFKPWGAVKLAGNLNKFLPLIGLAFEMWDSWKES
QKIEKLEKAKGEMESNFDGQKQEILDLINDETRFKQTCFPMALELEKCIQECEESVKKTQECAQGLEKWIQTGEDFIKGE
DFIEVEPERGMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66156; Mature: 66156

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETLEQFKANQKRNQENLKKLLDFIHTGEKYGIQIEESLKDKIRNAIKNVADQKLKVAL
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEE
VGGFSEGKTSIAAAWIDRLDESMKIDHKESSDAVKIYDIDNEMELVDTPGLFGFKQKEHD
EECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCC
SGKIEHYKDITKKYVSEAHLILYALNPSNPIKESHKDDLNWLFRTLNLLSRTIFVISRFD
CCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
EEADIEDEQDYNKRFKIKKENIQNRLNELISLSEEEKESLIIVAVAANPFDLGVEHWLKH
CCCCCCCCCCHHHHHCEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHCHHHHHHH
QEEFQKLSHIKTLQDATQKKIEENGGKLTIIEEAKKSVIQDVIYRQMPLAKKEQQEIKRE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
MEYLNKTLEKRRKEIQNLNSEISQARIYLREFITRYFSDLIAQVSGTSLETFNDFVIREI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GDEGINIDTRVQNAFERETQGIFNEISKIETIFNADRSFFEKHAGALGKIGINFLNQSGF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
INATNIKLARDTIAAAGKFVGIDWALKFKPWGAVKLAGNLNKFLPLIGLAFEMWDSWKES
EEECCCCHHHHHHHHCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
QKIEKLEKAKGEMESNFDGQKQEILDLINDETRFKQTCFPMALELEKCIQECEESVKKTQ
HHHHHHHHHHCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECAQGLEKWIQTGEDFIKGEDFIEVEPERGMN
HHHHHHHHHHHCCHHHHCCCCCEEECCCCCCC
>Mature Secondary Structure
MNETLEQFKANQKRNQENLKKLLDFIHTGEKYGIQIEESLKDKIRNAIKNVADQKLKVAL
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEE
VGGFSEGKTSIAAAWIDRLDESMKIDHKESSDAVKIYDIDNEMELVDTPGLFGFKQKEHD
EECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCC
SGKIEHYKDITKKYVSEAHLILYALNPSNPIKESHKDDLNWLFRTLNLLSRTIFVISRFD
CCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
EEADIEDEQDYNKRFKIKKENIQNRLNELISLSEEEKESLIIVAVAANPFDLGVEHWLKH
CCCCCCCCCCHHHHHCEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHCHHHHHHH
QEEFQKLSHIKTLQDATQKKIEENGGKLTIIEEAKKSVIQDVIYRQMPLAKKEQQEIKRE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
MEYLNKTLEKRRKEIQNLNSEISQARIYLREFITRYFSDLIAQVSGTSLETFNDFVIREI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GDEGINIDTRVQNAFERETQGIFNEISKIETIFNADRSFFEKHAGALGKIGINFLNQSGF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
INATNIKLARDTIAAAGKFVGIDWALKFKPWGAVKLAGNLNKFLPLIGLAFEMWDSWKES
EEECCCCHHHHHHHHCCCEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
QKIEKLEKAKGEMESNFDGQKQEILDLINDETRFKQTCFPMALELEKCIQECEESVKKTQ
HHHHHHHHHHCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ECAQGLEKWIQTGEDFIKGEDFIEVEPERGMN
HHHHHHHHHHHCCHHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA