Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563123

Identifier: 108563123

GI number: 108563123

Start: 734978

End: 735427

Strand: Direct

Name: 108563123

Synonym: HPAG1_0698

Alternate gene names: NA

Gene position: 734978-735427 (Clockwise)

Preceding gene: 108563122

Following gene: 108563129

Centisome position: 46.04

GC content: 35.78

Gene sequence:

>450_bases
TTGCATAGGATTTTAATGAATTTTTTACTCCCTAATAAGGGGGTTTTCAAAACGGCTGATAATACCATTTTAGGAGCTGG
TTTTGAAACGATCCCCCATTTTCAAGTGCCTATGGCTATGAAAGAATGGTGCGATAATCTCAATTATAAGATGAAAACCT
TACAAGATAAAGAAGAAAAACTAAAAGCCATTTTAGAACAACACATTTTGTTTGAAAGGATACACCCTTTTAGCGATGGT
AATGGTAGGGTGGGCAGAATGCTAATCTTTTATAGCGTTTTAGAGCAAAACTTAATACCATTTGTGATCACCAAAGAACA
AAAAGAGGTTTACATTAAGGCTTTAGACACGCGCAATACAGAAAGCTTATACCAACTCGCCAAAGTGTCCCAAGAGTTTG
AACTCACACACATACAAGGGCAAATGGTATTAAATAAGAATAAGCCCTAA

Upstream 100 bases:

>100_bases
AAAGAGCTTTCTTTGAAGTGAAAAACTATCAAAACATGCTCTTCTTTCTATTAGAAAACCTGAATAAAAGACAAAGCGTT
GATAGTTTTTTATAAGGGAG

Downstream 100 bases:

>100_bases
AATCATGGTTTTCAAGCGCGCATCAAATAGAGCTTTTTCCTTTCGCTTGAAGAAGCGATGTTGAGCAATTGGCGGTATTT
GGTGATCGTTCTTCTTACCA

Product: hypothetical protein

Products: NA

Alternate protein names: Fic Family Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MHRILMNFLLPNKGVFKTADNTILGAGFETIPHFQVPMAMKEWCDNLNYKMKTLQDKEEKLKAILEQHILFERIHPFSDG
NGRVGRMLIFYSVLEQNLIPFVITKEQKEVYIKALDTRNTESLYQLAKVSQEFELTHIQGQMVLNKNKP

Sequences:

>Translated_149_residues
MHRILMNFLLPNKGVFKTADNTILGAGFETIPHFQVPMAMKEWCDNLNYKMKTLQDKEEKLKAILEQHILFERIHPFSDG
NGRVGRMLIFYSVLEQNLIPFVITKEQKEVYIKALDTRNTESLYQLAKVSQEFELTHIQGQMVLNKNKP
>Mature_149_residues
MHRILMNFLLPNKGVFKTADNTILGAGFETIPHFQVPMAMKEWCDNLNYKMKTLQDKEEKLKAILEQHILFERIHPFSDG
NGRVGRMLIFYSVLEQNLIPFVITKEQKEVYIKALDTRNTESLYQLAKVSQEFELTHIQGQMVLNKNKP

Specific function: Unknown

COG id: COG3177

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17411; Mature: 17411

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRILMNFLLPNKGVFKTADNTILGAGFETIPHFQVPMAMKEWCDNLNYKMKTLQDKEEK
CHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEHHHHCCHHHH
LKAILEQHILFERIHPFSDGNGRVGRMLIFYSVLEQNLIPFVITKEQKEVYIKALDTRNT
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCH
ESLYQLAKVSQEFELTHIQGQMVLNKNKP
HHHHHHHHHHHHHEEEEECCEEEECCCCC
>Mature Secondary Structure
MHRILMNFLLPNKGVFKTADNTILGAGFETIPHFQVPMAMKEWCDNLNYKMKTLQDKEEK
CHHHHHHHHCCCCCCEECCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEHHHHCCHHHH
LKAILEQHILFERIHPFSDGNGRVGRMLIFYSVLEQNLIPFVITKEQKEVYIKALDTRNT
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCH
ESLYQLAKVSQEFELTHIQGQMVLNKNKP
HHHHHHHHHHHHHEEEEECCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA