Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563129

Identifier: 108563129

GI number: 108563129

Start: 740445

End: 740930

Strand: Direct

Name: 108563129

Synonym: HPAG1_0704

Alternate gene names: NA

Gene position: 740445-740930 (Clockwise)

Preceding gene: 108563123

Following gene: 108563130

Centisome position: 46.38

GC content: 40.95

Gene sequence:

>486_bases
ATGGTAAAATGCCGAAATTTGCTGTCGTCATGCGGCAAAAATTTAGACAACAAGGAATTGGGAATGAGAAGGAGTTTGGC
TTTTTGCCTGTTAGCTTTGCTTGGATTACAGGTTTTAGGCGCTAGGGATTTTTCGCAACTCAAAGATAAGGAGCTTTTAG
AATTAGCAGGCACTCTGCCTTCTAATGAAGCGATTGATTATCGCATGGAAGTGTCTAAACGCCTTAAAGCCTTAAGTGCT
GAAGACGCTAAGAAATTCCGCGCGAATTTCAGCCGGATCGCTAGGAAAAATCTTTCCAAAATGAGTGAAGAGGATTTCAA
AAAAATGCGTGAAGAAGTGCGTAAAGAATTAGAAGAAAAAACCAAAGGTTTGAGCACTGAAGAAATCAAGGCAAAAGGAC
TTAATGTGAGCGTTTGCAGCGGCGATACGAGAAAAGTTTGGTGTAGGGCTGTTAAGAAAAAAGACGAACATTGCTCTCCT
AAGTGA

Upstream 100 bases:

>100_bases
AAATAAAAATTAAATGATGATACACAATGGCTTTGCGCGAAATTTGAAAACCCCATTTTTTAGCACTCTTAATGGCGTTT
GAGAATAAGTTAAGATTAAC

Downstream 100 bases:

>100_bases
GATAAAATTTAATTTAAAAGGAAAAATATGAAAAAAGCGTTGAAAATACTTTCTGTTGGTGCGTTGTTATTTGTGGCTTT
AAACGCCAAAGATTTCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVKCRNLLSSCGKNLDNKELGMRRSLAFCLLALLGLQVLGARDFSQLKDKELLELAGTLPSNEAIDYRMEVSKRLKALSA
EDAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEKTKGLSTEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSP
K

Sequences:

>Translated_161_residues
MVKCRNLLSSCGKNLDNKELGMRRSLAFCLLALLGLQVLGARDFSQLKDKELLELAGTLPSNEAIDYRMEVSKRLKALSA
EDAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEKTKGLSTEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSP
K
>Mature_161_residues
MVKCRNLLSSCGKNLDNKELGMRRSLAFCLLALLGLQVLGARDFSQLKDKELLELAGTLPSNEAIDYRMEVSKRLKALSA
EDAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEKTKGLSTEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSP
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18285; Mature: 18285

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKCRNLLSSCGKNLDNKELGMRRSLAFCLLALLGLQVLGARDFSQLKDKELLELAGTLP
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
SNEAIDYRMEVSKRLKALSAEDAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TKGLSTEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSPK
HCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVKCRNLLSSCGKNLDNKELGMRRSLAFCLLALLGLQVLGARDFSQLKDKELLELAGTLP
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
SNEAIDYRMEVSKRLKALSAEDAKKFRANFSRIARKNLSKMSEEDFKKMREEVRKELEEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TKGLSTEEIKAKGLNVSVCSGDTRKVWCRAVKKKDEHCSPK
HCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA