| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is dgkA [H]
Identifier: 108563110
GI number: 108563110
Start: 719347
End: 719733
Strand: Direct
Name: dgkA [H]
Synonym: HPAG1_0685
Alternate gene names: 108563110
Gene position: 719347-719733 (Clockwise)
Preceding gene: 108563109
Following gene: 108563111
Centisome position: 45.06
GC content: 40.31
Gene sequence:
>387_bases ATGAGTGATTTTAAAGTCCCCCCCAAAGCTAAAGGGTTTAAACGCCTTTTTAAAGCCCTTTTTTATTCTAAAGACGGGCT TAAATGCGCATGGGCTGAAGAGAGCGCGTTCAGGCAAATTATTATCTTGGCTCTTTTTTGTATCACTCTAGCGAGCTATC TAGCTAAAGATTTTTTAGAATGGGGGCTATTGATTGCGCCTTGCTTTTTATCGGTGGTGATTGAACTCATCAATAGCTCT ATTGAAAAGGCTGTGGATTTTACTGGCACCGAGTTCCACCCTTTAGCTAAAAAGGCTAAAGACATGGCCAGTGCAGCCCA ACTGATAGGGCTTATTTTTTGGGCTTTTGTTTGGGGGCATTATCTTATAACGCTTTATTTTAATTAA
Upstream 100 bases:
>100_bases ATCGCTCTTAACGCCCAAGCTAAAGACAACACCAAGCTTACTTTTAACGCCTTGTTGGAAAGCCTTAGCGTGAATTTCTT TCAATCTTACAAAATAAGCC
Downstream 100 bases:
>100_bases ATTTTAGGGAGACACATGCAAGATCATTTAGTCAATGAAACAAAAAATATTGTAGAAGTGGGGATTGATTCTTCTATTGA AGAGAGCTATCTAGCCTATT
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIIILALFCITLASYLAKDFLEWGLLIAPCFLSVVIELINSS IEKAVDFTGTEFHPLAKKAKDMASAAQLIGLIFWAFVWGHYLITLYFN
Sequences:
>Translated_128_residues MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIIILALFCITLASYLAKDFLEWGLLIAPCFLSVVIELINSS IEKAVDFTGTEFHPLAKKAKDMASAAQLIGLIFWAFVWGHYLITLYFN >Mature_127_residues SDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIIILALFCITLASYLAKDFLEWGLLIAPCFLSVVIELINSSI EKAVDFTGTEFHPLAKKAKDMASAAQLIGLIFWAFVWGHYLITLYFN
Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=113, Percent_Identity=40.7079646017699, Blast_Score=93, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 14493; Mature: 14362
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS01069 DAGK_PROKAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIIILALFCITLASYLAKDFLE CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGLLIAPCFLSVVIELINSSIEKAVDFTGTEFHPLAKKAKDMASAAQLIGLIFWAFVWGH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLITLYFN HHHHHCCC >Mature Secondary Structure SDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIIILALFCITLASYLAKDFLE CCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WGLLIAPCFLSVVIELINSSIEKAVDFTGTEFHPLAKKAKDMASAAQLIGLIFWAFVWGH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLITLYFN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]