| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is feoB [H]
Identifier: 108563095
GI number: 108563095
Start: 701927
End: 703861
Strand: Reverse
Name: feoB [H]
Synonym: HPAG1_0670
Alternate gene names: 108563095
Gene position: 703861-701927 (Counterclockwise)
Preceding gene: 108563115
Following gene: 108563094
Centisome position: 44.09
GC content: 40.1
Gene sequence:
>1935_bases TTGGAAGTGAAAGAAATCACTATCGCTCTTGTGGGCCAGCCTAATGTAGGGAAATCCTCCCTCATCAACGCTTTGAGCAA CGCCCATTTGAAAGTGGGGAATTTTGCCGGGGTTACCGTGGATAAAATGGAAGTGGGTTTGATCCACAAAGAGCATCAAA TCACTATCATTGATTTACCTGGCACTTACGCGCTCAATGATTTCACCACTGAAGAAAAAGTTACTAAAGATTTTTTAGAA AAAGGGCAATACGATCTCATTCTTAATGTGGTGGATTCCACCAATTTAGAGCGTAATTTAGCCTTAAGCGCGCAGCTATT AGACACGAATAAAAAAATGCTTCTTGCGCTCAACATGTGGGATGAGGCGCAAAAAGAGGGCATTAAAATCAATACAGAAA AGCTTTCTCAAGAATTAGGGGTTGTGTGCGTGCCTACAAGCGCAAGATCCAAAGAAGATCGCTTGAATACCGAGCTTTTA TTAGATGAGATTGTCAGGCTTTATTCTCAAAACACTACAAACAATGAAAGCATAAAAGTCCCGTCTCAAAGTTTTAAGGA GTCTTTAAAATACAGCCAGAGCGCTCAAAGAATCGCCAAATTAGTGATCAGTGAAAACCAACAAAACACGAGCTTTGAAC ACACTTATAAGATTGATAAGATTTTAATGCACAAGCGTTATGGGATTTTCATTTTTTTAGGGTTTATGTTTATCATTTTT TCCTTGAGCTTTTTAATAGGGGGGGGAGTGCAAAAAGCGCTTGAAGCAGGGTTTAAATTTTTGAGCGATGGCATCAAAGA AAATGTGGCTAATGAAGATTTAGCGTCTTTGGTGGGCGATGGCATTATTGGGGGAGTGGGAGCGACGGTTTCATTCTTGC CTTTAATTGTGGTGTTGTATTTTGGGATTTCTTTACTAGAGACGACAGGCTATATGAGTAGGGTAGCGTTTTTACTAGAT GGGATCTTGCATAAATTTGGCTTGCATGGGAAGAGTTTTATCCCTTTAATCACCGGTTTTGGCTGCTCAGTGCCCGCTTA CATGGCGACAAGAACCTTACAAAATTATAACGAACGACTGATCACGCTTTTTGTGATCGGCTTTATGAGTTGCTCGGCAA GACTCCCTATTTATGTGCTGTTTGTAGGCTCGTTTTTTCCTTCTTCTAGTGCGGGTTTTGTGCTGTTTTGCATTTATATT TTGGGGGCGGTTGTGGCGTTAGTGATGGCCAAATTGCTCAAATTAAGCGTGTTTAAAGGGCAGACCGAATCCTTTATCAT GGAAATGCCCAAATACCGCTTTCCTAGTTGGAGAATGGTCTATTTCAGTATCTACACCAAATCGCTTTCCTACCTAAAAA AGGCCGGGACTTATATTTTAGTGGGAGCGATTTTAATCTGGTTTATGTCTCAATACCCTAAAAGCGATGCGGCTATGAAA ACTTATAAACAAGAAAGCTTGTTAGTGGATAAAGACACCACCCTTTCAAGCGAAGCTAAAGAAGAAAAATTAAAAGAATT AAAAGCCGAATTGGATAAAAAGAATTTAAAAAACAGCGTTGTAGGAAGAGGTGGGGCGTATTTAGAAAAAGTCTTTAGCC CTATGGATTTTGATTGGCGTTTGAGTGTGTCGCTTGTAACCGGATTTATGGCTAAAGAGGTGGTGGTTTCTACTTTGGGC GTGTTGTTTTCTTTAGGGGATCAAAATGAAAAATCTGACGCTTTTAGAGAGATTTTAAGAAAAGAAGTCAGCGTGCCAAG CGGGATCGCTTTTATCGTGTTTGTGATGTTTTATATCCCTTGTTTTGCAGCGACCATTACTTTTGGTAGGGAAGCTGGGG GGATCAAGTTTGTAGCGTATTTATTCATCTTCACAACCGTTGTAGCGTATGCGTTTTCCTTGATAGCTTTTTATGCGACT CAAATTTTGGTTTAA
Upstream 100 bases:
>100_bases TCTCGCTTTTATTATATAACAATTAGTCTTATAGCGCTATAGTGCTAACTTTTAATATCAAAACGATATAACCAAAAATT AAAAAAACTTATCTGGAGAA
Downstream 100 bases:
>100_bases AGCCTAGCCATAAAAGGGTTTAAAAACCCTTTATTTGTTTAAAATTCATCTCATTAGAAATATTAAAAAATTTTTATTTT TCTCCCAATCTTTTCTATAA
Product: iron(II) transport protein
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLE KGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELL LDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLD GILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYI LGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLG VLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYAT QILV
Sequences:
>Translated_644_residues MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLE KGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELL LDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLD GILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYI LGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLG VLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYAT QILV >Mature_644_residues MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLE KGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELL LDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLD GILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYI LGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLG VLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYAT QILV
Specific function: ATP-driven Fe(2+) uptake system [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=749, Percent_Identity=28.437917222964, Blast_Score=272, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011642 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 71684; Mature: 71684
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLP CCCEEEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEHEEEEEECCEEEEEECC GTYALNDFTTEEKVTKDFLEKGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMW CCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECH DEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELLLDEIVRLYSQNTTNNESIKV HHHHHCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC PSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLY HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH FGISLLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH ITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILGAVVALVMAKLLKLSVFKG HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC QTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK CHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHH TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWR HHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCE LSVSLVTGFMAKEVVVSTLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIP EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH CFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQILV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLP CCCEEEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEHEEEEEECCEEEEEECC GTYALNDFTTEEKVTKDFLEKGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMW CCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECH DEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELLLDEIVRLYSQNTTNNESIKV HHHHHCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC PSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLY HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH FGISLLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH ITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILGAVVALVMAKLLKLSVFKG HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC QTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK CHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHH TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWR HHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCE LSVSLVTGFMAKEVVVSTLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIP EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH CFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQILV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]