Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is feoB [H]

Identifier: 108563095

GI number: 108563095

Start: 701927

End: 703861

Strand: Reverse

Name: feoB [H]

Synonym: HPAG1_0670

Alternate gene names: 108563095

Gene position: 703861-701927 (Counterclockwise)

Preceding gene: 108563115

Following gene: 108563094

Centisome position: 44.09

GC content: 40.1

Gene sequence:

>1935_bases
TTGGAAGTGAAAGAAATCACTATCGCTCTTGTGGGCCAGCCTAATGTAGGGAAATCCTCCCTCATCAACGCTTTGAGCAA
CGCCCATTTGAAAGTGGGGAATTTTGCCGGGGTTACCGTGGATAAAATGGAAGTGGGTTTGATCCACAAAGAGCATCAAA
TCACTATCATTGATTTACCTGGCACTTACGCGCTCAATGATTTCACCACTGAAGAAAAAGTTACTAAAGATTTTTTAGAA
AAAGGGCAATACGATCTCATTCTTAATGTGGTGGATTCCACCAATTTAGAGCGTAATTTAGCCTTAAGCGCGCAGCTATT
AGACACGAATAAAAAAATGCTTCTTGCGCTCAACATGTGGGATGAGGCGCAAAAAGAGGGCATTAAAATCAATACAGAAA
AGCTTTCTCAAGAATTAGGGGTTGTGTGCGTGCCTACAAGCGCAAGATCCAAAGAAGATCGCTTGAATACCGAGCTTTTA
TTAGATGAGATTGTCAGGCTTTATTCTCAAAACACTACAAACAATGAAAGCATAAAAGTCCCGTCTCAAAGTTTTAAGGA
GTCTTTAAAATACAGCCAGAGCGCTCAAAGAATCGCCAAATTAGTGATCAGTGAAAACCAACAAAACACGAGCTTTGAAC
ACACTTATAAGATTGATAAGATTTTAATGCACAAGCGTTATGGGATTTTCATTTTTTTAGGGTTTATGTTTATCATTTTT
TCCTTGAGCTTTTTAATAGGGGGGGGAGTGCAAAAAGCGCTTGAAGCAGGGTTTAAATTTTTGAGCGATGGCATCAAAGA
AAATGTGGCTAATGAAGATTTAGCGTCTTTGGTGGGCGATGGCATTATTGGGGGAGTGGGAGCGACGGTTTCATTCTTGC
CTTTAATTGTGGTGTTGTATTTTGGGATTTCTTTACTAGAGACGACAGGCTATATGAGTAGGGTAGCGTTTTTACTAGAT
GGGATCTTGCATAAATTTGGCTTGCATGGGAAGAGTTTTATCCCTTTAATCACCGGTTTTGGCTGCTCAGTGCCCGCTTA
CATGGCGACAAGAACCTTACAAAATTATAACGAACGACTGATCACGCTTTTTGTGATCGGCTTTATGAGTTGCTCGGCAA
GACTCCCTATTTATGTGCTGTTTGTAGGCTCGTTTTTTCCTTCTTCTAGTGCGGGTTTTGTGCTGTTTTGCATTTATATT
TTGGGGGCGGTTGTGGCGTTAGTGATGGCCAAATTGCTCAAATTAAGCGTGTTTAAAGGGCAGACCGAATCCTTTATCAT
GGAAATGCCCAAATACCGCTTTCCTAGTTGGAGAATGGTCTATTTCAGTATCTACACCAAATCGCTTTCCTACCTAAAAA
AGGCCGGGACTTATATTTTAGTGGGAGCGATTTTAATCTGGTTTATGTCTCAATACCCTAAAAGCGATGCGGCTATGAAA
ACTTATAAACAAGAAAGCTTGTTAGTGGATAAAGACACCACCCTTTCAAGCGAAGCTAAAGAAGAAAAATTAAAAGAATT
AAAAGCCGAATTGGATAAAAAGAATTTAAAAAACAGCGTTGTAGGAAGAGGTGGGGCGTATTTAGAAAAAGTCTTTAGCC
CTATGGATTTTGATTGGCGTTTGAGTGTGTCGCTTGTAACCGGATTTATGGCTAAAGAGGTGGTGGTTTCTACTTTGGGC
GTGTTGTTTTCTTTAGGGGATCAAAATGAAAAATCTGACGCTTTTAGAGAGATTTTAAGAAAAGAAGTCAGCGTGCCAAG
CGGGATCGCTTTTATCGTGTTTGTGATGTTTTATATCCCTTGTTTTGCAGCGACCATTACTTTTGGTAGGGAAGCTGGGG
GGATCAAGTTTGTAGCGTATTTATTCATCTTCACAACCGTTGTAGCGTATGCGTTTTCCTTGATAGCTTTTTATGCGACT
CAAATTTTGGTTTAA

Upstream 100 bases:

>100_bases
TCTCGCTTTTATTATATAACAATTAGTCTTATAGCGCTATAGTGCTAACTTTTAATATCAAAACGATATAACCAAAAATT
AAAAAAACTTATCTGGAGAA

Downstream 100 bases:

>100_bases
AGCCTAGCCATAAAAGGGTTTAAAAACCCTTTATTTGTTTAAAATTCATCTCATTAGAAATATTAAAAAATTTTTATTTT
TCTCCCAATCTTTTCTATAA

Product: iron(II) transport protein

Products: Fe (II) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLE
KGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELL
LDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF
SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLD
GILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYI
LGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK
TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLG
VLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYAT
QILV

Sequences:

>Translated_644_residues
MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLE
KGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELL
LDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF
SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLD
GILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYI
LGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK
TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLG
VLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYAT
QILV
>Mature_644_residues
MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLPGTYALNDFTTEEKVTKDFLE
KGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMWDEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELL
LDEIVRLYSQNTTNNESIKVPSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF
SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLYFGISLLETTGYMSRVAFLLD
GILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERLITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYI
LGAVVALVMAKLLKLSVFKGQTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK
TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWRLSVSLVTGFMAKEVVVSTLG
VLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIPCFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYAT
QILV

Specific function: ATP-driven Fe(2+) uptake system [H]

COG id: COG0370

COG function: function code P; Fe2+ transport system protein B

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1789813, Length=749, Percent_Identity=28.437917222964, Blast_Score=272, Evalue=4e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003373
- InterPro:   IPR011640
- InterPro:   IPR011642
- InterPro:   IPR002917
- InterPro:   IPR005225 [H]

Pfam domain/function: PF07664 FeoB_C; PF07670 Gate; PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 71684; Mature: 71684

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLP
CCCEEEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEHEEEEEECCEEEEEECC
GTYALNDFTTEEKVTKDFLEKGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMW
CCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECH
DEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELLLDEIVRLYSQNTTNNESIKV
HHHHHCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC
PSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLY
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH
FGISLLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILGAVVALVMAKLLKLSVFKG
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK
CHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHH
TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWR
HHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCE
LSVSLVTGFMAKEVVVSTLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIP
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
CFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQILV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEVKEITIALVGQPNVGKSSLINALSNAHLKVGNFAGVTVDKMEVGLIHKEHQITIIDLP
CCCEEEEEEEECCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEHEEEEEECCEEEEEECC
GTYALNDFTTEEKVTKDFLEKGQYDLILNVVDSTNLERNLALSAQLLDTNKKMLLALNMW
CCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECH
DEAQKEGIKINTEKLSQELGVVCVPTSARSKEDRLNTELLLDEIVRLYSQNTTNNESIKV
HHHHHCCCEEEHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC
PSQSFKESLKYSQSAQRIAKLVISENQQNTSFEHTYKIDKILMHKRYGIFIFLGFMFIIF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSFLIGGGVQKALEAGFKFLSDGIKENVANEDLASLVGDGIIGGVGATVSFLPLIVVLY
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHHHHHH
FGISLLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAYMATRTLQNYNERL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ITLFVIGFMSCSARLPIYVLFVGSFFPSSSAGFVLFCIYILGAVVALVMAKLLKLSVFKG
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTESFIMEMPKYRFPSWRMVYFSIYTKSLSYLKKAGTYILVGAILIWFMSQYPKSDAAMK
CHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHH
TYKQESLLVDKDTTLSSEAKEEKLKELKAELDKKNLKNSVVGRGGAYLEKVFSPMDFDWR
HHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCE
LSVSLVTGFMAKEVVVSTLGVLFSLGDQNEKSDAFREILRKEVSVPSGIAFIVFVMFYIP
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
CFAATITFGREAGGIKFVAYLFIFTTVVAYAFSLIAFYATQILV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Fe (II) [Periplasm] [C]

Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]