Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is fecA [H]

Identifier: 108563094

GI number: 108563094

Start: 699373

End: 701676

Strand: Reverse

Name: fecA [H]

Synonym: HPAG1_0669

Alternate gene names: 108563094

Gene position: 701676-699373 (Counterclockwise)

Preceding gene: 108563095

Following gene: 108563092

Centisome position: 43.95

GC content: 39.97

Gene sequence:

>2304_bases
ATGAAAAGAATTTTAGTCTCTTTGGCTGTTTTGAGTCATAGCGCGCATGCTGTCAAAACTCATAATTTGGAAAGGGTGGA
AGCTTCAGGGGTGGCTAACGATAAAGAAGCGCCTTTAAGCTGGAGGAGCAAGGAAGTTAGAAACTATATGGGTTCTCGCA
CGGTGATTTCTAATAAGCAACTCACTAAAAGCGCCAATCAAAGCATTGAAGAAGCTTTGCAAAATGTGCCAGGCGTGCAT
ATTAGAAACGCTACGGGTATTGGAGCTGTGCCTAGCTTTTCTGTTAGGGGGTTTGGCGGGGGGAGTTCAGGGCATTCTAA
TACGGCTATGGTTTTAGTCAATGGGATCCCTATTTATGTCGCGCCCTATGTTGATATTAGCATTCCTATTTTCCCTGTAA
CCTTTCAATCTGTAGATAGGATCAGCGTAACCAAGGGTGGGGAGAGCGTGCGTTATGGCCCTAATGTTTTTGGCGGTGTG
ATTAATGTGATCACTAAGGGCATTCCTACCAAGTGGGAGAGTCAGGTGAGTGAGAGGGCCACTTTTTGGGGCAAATCTGA
AAATGGGGGCTTTTTCAATCAAAATTCTAAAAACCTTGACAAAAGCTTAGCCAATAACATGCTTTTTGACACTTACTTAA
GAACAGGGGGCATGATGAATAAACATTTTGGAATCCAAGCTCAAGCCAACTGGCTCAAAGGGCAAGGGTTTAGATACAAC
AGCCCTACGAACATTCAAAACTACATGTTAGATTCCTTGTATCAAATCAATGAGAGCAATAAGATCACTGCTTTTTTCCA
ATATTATAATTATTTTATGGCAGACCCCGGATCTTTAGGTATAGAAGCGTATAATCAAAATCGTTTTCAAAACAACCGCC
CCAATAACAATAAAAGCGGGAGAGCGAAGCGATGGGGGGCTGTGTATCAAAACTTTTTTGGGGATACGGATAAAATAGGT
GGGGATTTCACTTTTAGCTACTATGGGCATGACATGTCAAGGGATTTTCAATTTGATTCTAATTTTTTGAATGTCAATAC
CAATCCTAAATTAGGCCCTGTTTATACGGATCAAAATTATGCAGGATTTTTTATCTTTGATCATTTAAGGCGTTATATAA
TGAACGCTTTTGAGCCTAATTTGAACTTAGTTGTCAATACCAGTAAAGTTAAGCAAACTTTTAATGTGGGCATGCGTTTT
ATGACAATGGATATGTATTTCAGATTGGATCAAAGCACATGCGAAAAAGCGGATATTTTTAATGGGGTGTGCCGCATGCC
TCCTTTTGTTCTTTCTAAAAAACCCAGCAACAATCAAAACTTGTTTAACAACTATACAGCGGTATGGTTGAGCGATAAAA
TAGAGCTTTTTGATTCTAAATTGGTGATAACTCCAGGGCTTAGGTACACTTTTTTGAACTATAACAACAAAGAGCCAGAA
AAGCATGATTTTTCTGTATGGAAGACTACAAAAAAGCGTCAAAACGAATGGAGTCCCGCCCTTAACATTGGCTATAAACC
TATGGAAAATTGGATATGGTATGCGAACTACCGCCGCAGTTTTATCCCCCCACAACACACAATGCTAGGCATTACTAGGA
CTAATTACAACCAAATTTTCAATGAAATTGAAGTGGGGCAACGCTATAGTTATAAAAATCTATTGAGCTTTAATACCAAT
TATTTTGTGATTTTTGCCAATCGTTACTATGCGGGAGGCTATAGCCCACAGCCTATTAACGCTAGGAGTCAAGGGGTGGA
ATTGGAATTGTATTACGCGCCAATTAGGGGTTTGCAATTTCATGTGGCTTACACTTACATTGATGCGCGCATCACTTCTA
ACGCTGATGATATTGCTTATTATTTTACAGGCATTGTCAATAAACCCTTTGACATTAAAGGCAAGCGTTTGCCTTATGTG
AGTCCTAACCAATTCATATTTGACATGATGTATACTTACAAGCACACGACTTTTGGAATCAGTAGCTATTTTTATAGCCG
CGCTTATAGTTCCATGCTCAATCAAGCCAAAAGCCAAACCGTGTGCTTGCCCTTAAACCCAGAATACACAGGGGGGCTAG
AGTATGGTTGTAATTCTGTGGGGTTATTGCCCTTGTATTTTGTGTTGAACGTTCAAGTAAGCTCAGTTTTATGGCAAAGC
GGTAGGCATAAAATCACAGGGAGTTTGCAAATCAATAACCTTTTCAACATGAAGTATTATTTTAGGGGGATTGGCACAAG
CCCTACAGGAAGAGAGCCCGCACCAGGGAGATCCATTACAGCGTATTTGAATTATGAGTTTTAA

Upstream 100 bases:

>100_bases
TTTAAATAATAATTGTCTCAAAATTTAAGCTAAAACTAATAATGGTTATTATAAATTTCACATTGTTGTAAAAAAGAACA
TTTTTCATAAAAGGTGGTAA

Downstream 100 bases:

>100_bases
ACTAGCTTCAAGCTTTTATGGCTTGAATGTTTTTAATATCAAACCATTTTAAAACTCGCTACTAAATTTTCGGTCAATAA
ATTAAACCCATCTACCAGAA

Product: iron(III) dicitrate transport protein

Products: NA

Alternate protein names: Iron(III) dicitrate transport protein fecA [H]

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQLTKSANQSIEEALQNVPGVH
IRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYVAPYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV
INVITKGIPTKWESQVSERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
SPTNIQNYMLDSLYQINESNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG
GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYAGFFIFDHLRRYIMNAFEPNLNLVVNTSKVKQTFNVGMRF
MTMDMYFRLDQSTCEKADIFNGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
KHDFSVWKTTKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIFNEIEVGQRYSYKNLLSFNTN
YFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYV
SPNQFIFDMMYTYKHTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF

Sequences:

>Translated_767_residues
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQLTKSANQSIEEALQNVPGVH
IRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYVAPYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV
INVITKGIPTKWESQVSERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
SPTNIQNYMLDSLYQINESNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG
GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYAGFFIFDHLRRYIMNAFEPNLNLVVNTSKVKQTFNVGMRF
MTMDMYFRLDQSTCEKADIFNGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
KHDFSVWKTTKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIFNEIEVGQRYSYKNLLSFNTN
YFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYV
SPNQFIFDMMYTYKHTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF
>Mature_767_residues
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQLTKSANQSIEEALQNVPGVH
IRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYVAPYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGV
INVITKGIPTKWESQVSERATFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
SPTNIQNYMLDSLYQINESNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSGRAKRWGAVYQNFFGDTDKIG
GDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNYAGFFIFDHLRRYIMNAFEPNLNLVVNTSKVKQTFNVGMRF
MTMDMYFRLDQSTCEKADIFNGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
KHDFSVWKTTKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIFNEIEVGQRYSYKNLLSFNTN
YFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQFHVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYV
SPNQFIFDMMYTYKHTTFGISSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF

Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]

COG id: COG4772

COG function: function code P; Outer membrane receptor for Fe3+-dicitrate

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1790743, Length=719, Percent_Identity=22.6703755215577, Blast_Score=143, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR011662
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 87618; Mature: 87618

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQ
CCHHHEEHHHHHCCCCEEECCCCHHHECCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCH
LTKSANQSIEEALQNVPGVHIRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYV
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEE
APYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGVINVITKGIPTKWESQVSERA
EEEEEEEEEEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHH
TFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEECCCCEECC
SPTNIQNYMLDSLYQINESNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSG
CCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
RAKRWGAVYQNFFGDTDKIGGDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNY
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCEEECCCC
AGFFIFDHLRRYIMNAFEPNLNLVVNTSKVKQTFNVGMRFMTMDMYFRLDQSTCEKADIF
CEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCEEEEEEEEEEEECCHHHHHHHHH
NGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
CCHHHCCCCEECCCCCCCCCCCCCEEEEEEECCEEECCCEEEECCCCEEEEEECCCCCCC
KHDFSVWKTTKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIF
CCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHH
NEIEVGQRYSYKNLLSFNTNYFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQF
HHHHHCCCCCCHHHEEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE
HVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYVSPNQFIFDMMYTYKHTTFGI
EEEEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
SSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHHC
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF
CCEEEEEEEEECCEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKRILVSLAVLSHSAHAVKTHNLERVEASGVANDKEAPLSWRSKEVRNYMGSRTVISNKQ
CCHHHEEHHHHHCCCCEEECCCCHHHECCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCH
LTKSANQSIEEALQNVPGVHIRNATGIGAVPSFSVRGFGGGSSGHSNTAMVLVNGIPIYV
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEE
APYVDISIPIFPVTFQSVDRISVTKGGESVRYGPNVFGGVINVITKGIPTKWESQVSERA
EEEEEEEEEEEEEECCCCCEEEEECCCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHH
TFWGKSENGGFFNQNSKNLDKSLANNMLFDTYLRTGGMMNKHFGIQAQANWLKGQGFRYN
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEECCCCEECC
SPTNIQNYMLDSLYQINESNKITAFFQYYNYFMADPGSLGIEAYNQNRFQNNRPNNNKSG
CCCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
RAKRWGAVYQNFFGDTDKIGGDFTFSYYGHDMSRDFQFDSNFLNVNTNPKLGPVYTDQNY
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEECCCEEEECCCCCCCCEEECCCC
AGFFIFDHLRRYIMNAFEPNLNLVVNTSKVKQTFNVGMRFMTMDMYFRLDQSTCEKADIF
CEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCEEEEEEEEEEEECCHHHHHHHHH
NGVCRMPPFVLSKKPSNNQNLFNNYTAVWLSDKIELFDSKLVITPGLRYTFLNYNNKEPE
CCHHHCCCCEECCCCCCCCCCCCCEEEEEEECCEEECCCEEEECCCCEEEEEECCCCCCC
KHDFSVWKTTKKRQNEWSPALNIGYKPMENWIWYANYRRSFIPPQHTMLGITRTNYNQIF
CCCCHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHH
NEIEVGQRYSYKNLLSFNTNYFVIFANRYYAGGYSPQPINARSQGVELELYYAPIRGLQF
HHHHHCCCCCCHHHEEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE
HVAYTYIDARITSNADDIAYYFTGIVNKPFDIKGKRLPYVSPNQFIFDMMYTYKHTTFGI
EEEEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
SSYFYSRAYSSMLNQAKSQTVCLPLNPEYTGGLEYGCNSVGLLPLYFVLNVQVSSVLWQS
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCEEEEHHHHHHHHHHHHHC
GRHKITGSLQINNLFNMKYYFRGIGTSPTGREPAPGRSITAYLNYEF
CCEEEEEEEEECCEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]