| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is ftnA [H]
Identifier: 108563063
GI number: 108563063
Start: 663359
End: 663862
Strand: Reverse
Name: ftnA [H]
Synonym: HPAG1_0638
Alternate gene names: 108563063
Gene position: 663862-663359 (Counterclockwise)
Preceding gene: 108563084
Following gene: 108563062
Centisome position: 41.59
GC content: 38.49
Gene sequence:
>504_bases ATGTTATCAAAAGACATCATTAAGTTGCTAAACGAACAAGTGAATAAGGAAATGAACTCTTCCAACTTGTATATGAGCAT GAGTTCTTGGTGCTATACCCATAGCTTAGATGGTGCGGGGCTTTTCTTGTTTGACCATGCGGCTGAAGAATACGAGCATG CTAAAAAGCTTATCGTCTTCTTGAATGAAAACAATGTGCCTGTGCAATTGACTAGCATCAGCGCCCCTGAGCATAAGTTT GAAGGTTTGACTCAAATTTTCCAAAAAGCCTATGAACATGAGCAACACATCAGCGAGTCTATTAACAATATCGTTGATCA CGCCATAAAAGGCAAAGATCATGCGACTTTCAATTTCTTGCAATGGTATGTGTCTGAACAGCATGAAGAAGAAGTGCTTT TCAAGGATATTTTGGATAAAATTGAGTTGATTGGTAATGAAAACCATGGCTTGTATTTGGCTGATCAGTATGTCAAAGGG ATCGCTAAAAGCAGGAAATCTTAA
Upstream 100 bases:
>100_bases TTTTTATAAATTTTTAAAAATTTTCATACTCCTGTTTACTTTTTCATTATCATTTATGCTATAATTATGGGACAACTTAA ACCAACACAAAGGAGATACT
Downstream 100 bases:
>100_bases TTTTAGGGTATTGGGTGCAAAAACTAGCCGTTTTTGATTTTGACTCCACGCTAGTCAATGCTGAGACGATTGAGTCTTTA GCGAGAGCGTGGGGGGTGTT
Product: nonheme iron-containing ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIVFLNENNVPVQLTSISAPEHKF EGLTQIFQKAYEHEQHISESINNIVDHAIKGKDHATFNFLQWYVSEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKG IAKSRKS
Sequences:
>Translated_167_residues MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIVFLNENNVPVQLTSISAPEHKF EGLTQIFQKAYEHEQHISESINNIVDHAIKGKDHATFNFLQWYVSEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKG IAKSRKS >Mature_167_residues MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIVFLNENNVPVQLTSISAPEHKF EGLTQIFQKAYEHEQHISESINNIVDHAIKGKDHATFNFLQWYVSEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKG IAKSRKS
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=156, Percent_Identity=44.8717948717949, Blast_Score=149, Evalue=9e-38, Organism=Escherichia coli, GI1788212, Length=142, Percent_Identity=29.5774647887324, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 19286; Mature: 19286
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIVF CCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHEEEE LNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKGKDHATFNFL ECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH QWYVSEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRKS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCC >Mature Secondary Structure MLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIVF CCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHEEEE LNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKGKDHATFNFL ECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH QWYVSEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRKS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]