| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is ogt [H]
Identifier: 108563084
GI number: 108563084
Start: 689954
End: 690460
Strand: Reverse
Name: ogt [H]
Synonym: HPAG1_0659
Alternate gene names: 108563084
Gene position: 690460-689954 (Counterclockwise)
Preceding gene: 108563085
Following gene: 108563063
Centisome position: 43.25
GC content: 36.29
Gene sequence:
>507_bases ATGGTTTTATACCACTACTATTTTAAGACCCCTAAGAGTTTCCCTTTAGAGTATTTGCATTTGTGCGCTAATGAGAGCCA TTTATTAAGATTGGATTTTGATGCGACCAATTTTTCTCATAACACCCCTATGAATACCCCATTAAAACTCAGCGTTCAAG CCTTGGAGCGTTATTTCTTGGGACAACTTTTTGAATTTAATACGCCTTTAGATTTGATAGGGACTTTTTTTCAAAAACAA GTTTGGTCTGCGTTAATGGCTATCCCTTATGGTAAAACAAAAAGTTACGATGAAATCGCAAAGCTCATTAATAACCCTAA ATCTTGCAGAGCTGTTGGCAACGCTAATTATAATAACCCTATTTCTTTGATCGTGCCTTGTCATAGAGTGGTGCGTAAAA ATGGCGCTTTAGGGGGGTATAATGGGGGCATAGAAGTCAAAAAGTGGCTGTTAGAATTTGAAAGCAAAATTTTAAATGAG CAGGCTAAAAACTCTTTGATTTCTTAA
Upstream 100 bases:
>100_bases GATCATGGGGCTTTTGAATGAAAAAATGCATAAAGCTTTGATTTTAGGGGTGTATGGTTTGTCGCTATTGATTGTTTTAT ACAAACTCTTTTTTTAATTG
Downstream 100 bases:
>100_bases AAAATGGGGTTTTGGTTGTTTTATGGTAAAAATCCTTTTTTTTAAGGGGGTAGGGGGTGTTTTTAATTTTCTTCCCAAAT GCTCGCCGCTTCTTCTAAAC
Product: methylated-DNA--protein-cysteine methyltransferase
Products: NA
Alternate protein names: 6-O-methylguanine-DNA methyltransferase; MGMT; O-6-methylguanine-DNA-alkyltransferase [H]
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MVLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFLGQLFEFNTPLDLIGTFFQKQ VWSALMAIPYGKTKSYDEIAKLINNPKSCRAVGNANYNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNE QAKNSLIS
Sequences:
>Translated_168_residues MVLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFLGQLFEFNTPLDLIGTFFQKQ VWSALMAIPYGKTKSYDEIAKLINNPKSCRAVGNANYNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNE QAKNSLIS >Mature_168_residues MVLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFLGQLFEFNTPLDLIGTFFQKQ VWSALMAIPYGKTKSYDEIAKLINNPKSCRAVGNANYNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNE QAKNSLIS
Specific function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a sui
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MGMT family [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=86, Percent_Identity=43.0232558139535, Blast_Score=88, Evalue=4e-18, Organism=Escherichia coli, GI1788542, Length=134, Percent_Identity=42.5373134328358, Blast_Score=104, Evalue=3e-24, Organism=Escherichia coli, GI1787596, Length=133, Percent_Identity=40.6015037593985, Blast_Score=104, Evalue=3e-24, Organism=Caenorhabditis elegans, GI115533070, Length=84, Percent_Identity=47.6190476190476, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI115533068, Length=80, Percent_Identity=48.75, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6320001, Length=103, Percent_Identity=39.8058252427184, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF01035 DNA_binding_1; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 19206; Mature: 19206
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFL CEEEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH GQLFEFNTPLDLIGTFFQKQVWSALMAIPYGKTKSYDEIAKLINNPKSCRAVGNANYNNP HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC ISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNEQAKNSLIS EEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHNTPMNTPLKLSVQALERYFL CEEEEEEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH GQLFEFNTPLDLIGTFFQKQVWSALMAIPYGKTKSYDEIAKLINNPKSCRAVGNANYNNP HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC ISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNEQAKNSLIS EEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]