| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is galU [H]
Identifier: 108563056
GI number: 108563056
Start: 656737
End: 657558
Strand: Direct
Name: galU [H]
Synonym: HPAG1_0631
Alternate gene names: 108563056
Gene position: 656737-657558 (Clockwise)
Preceding gene: 108563055
Following gene: 108563057
Centisome position: 41.14
GC content: 42.58
Gene sequence:
>822_bases ATGATTAAAAAATGCCTTTTTCCTGCCGCTGGCTACGGCACGCGCTTTTTGCCGATCACTAAAACCATTCCTAAAGAAAT GCTGCCCATTGTGGATAAGCCTTTAATCCAATACGCTGTGGAAGAAGCGATGGAAGCAGGCTGTGAAGTGATGGCGATCG TTACAGGCAGGAATAAACGAAGTTTAGAAGATTATTTTGACACGAGCTATGAAATAGAGCATCAAATCCAAGGCACCAAC AAAGAAAACGCCTTAAAAAGCATTCGTAACGTTATAGAAAAATGCTGTTTTTCTTATGTGCGCCAAAAGCAAATGAAAGG CTTAGGGCATGCGATTTTAACTGGGGAAGCCCTGATAGGCAATGAGCCTTTTGCGGTGATTTTAGCCGATGACTTGTGCA TAAGCCATGATCACCCAAGCGTGTTAAAGCAAATGACTTCGTTGTATCAAAAATACCAATGCTCCATTGTAGCCATTGAA GAAGTGGCGCTAGAAGAAGTTTCAAAATACGGCGTGATTAAGGGCGAATGGTTAGAAGAGGGGGTGTATGAGATTAAAGA CATGGTGGAAAAACCAAGCCAAGAAGACGCTCCAAGCAATCTGGCCGTGATAGGGCGCTACATTTTAACTCCGGATATTT TTGAAATTTTAAGCGAGACGAAACCGGGTAAAAACAATGAAATCCAAATCACGGATGCCTTACGCGCTCAAGCCAAAAGA AAACGCATCATCGCTTACCAATTCAAAGGCAAGCGATACGATTGCGGGAGCGTGGAAGGCTATATTGAAGCGAGTAACGC TTATTATAAAAAACGCTTATAA
Upstream 100 bases:
>100_bases TTAGAGTCATGCTCAATTACTTGATTTATCAAGAAATTTTTGGGAATTTCATCCCTATTGATGCATTTTTAGAACAAACT CTTAACTCAAAGGACAAACC
Downstream 100 bases:
>100_bases ATCTATCAACATGGGCAATTTGACTTATTACGCTTACATGTATTTGATCCTCTTTGTATGCTTGATCCCTGTGTTATTAA TGGGGCTTGCTTGGAGACTT
Product: UDP-glucose pyrophosphorylase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN KENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIE EVALEEVSKYGVIKGEWLEEGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL
Sequences:
>Translated_273_residues MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN KENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIE EVALEEVSKYGVIKGEWLEEGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL >Mature_273_residues MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN KENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIE EVALEEVSKYGVIKGEWLEEGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=277, Percent_Identity=41.8772563176895, Blast_Score=208, Evalue=3e-55, Organism=Escherichia coli, GI1788355, Length=281, Percent_Identity=37.7224199288256, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1788351, Length=268, Percent_Identity=27.2388059701493, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1790224, Length=272, Percent_Identity=27.9411764705882, Blast_Score=78, Evalue=8e-16,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 30877; Mature: 30877
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKR CCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC SLEDYFDTSYEIEHQIQGTNKENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIG HHHHHHCCCEEEEHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCEEEC NEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIKGEWLEE CCCEEEEEECCEEECCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCHHHHH GVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL CCEEEEEECCCCCCCCCCCCEEECCCCHHHCCC >Mature Secondary Structure MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKR CCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC SLEDYFDTSYEIEHQIQGTNKENALKSIRNVIEKCCFSYVRQKQMKGLGHAILTGEALIG HHHHHHCCCEEEEHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCEEEC NEPFAVILADDLCISHDHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIKGEWLEE CCCEEEEEECCEEECCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCHHHHH GVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALRAQAKR HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL CCEEEEEECCCCCCCCCCCCEEECCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]