Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563057

Identifier: 108563057

GI number: 108563057

Start: 657569

End: 657976

Strand: Direct

Name: 108563057

Synonym: HPAG1_0632

Alternate gene names: NA

Gene position: 657569-657976 (Clockwise)

Preceding gene: 108563056

Following gene: 108563058

Centisome position: 41.19

GC content: 35.29

Gene sequence:

>408_bases
ATGGGCAATTTGACTTATTACGCTTACATGTATTTGATCCTCTTTGTATGCTTGATCCCTGTGTTATTAATGGGGCTTGC
TTGGAGACTTTTTCGCCCCCCCTTAAAGCAAAATATTCCTAATAAAAGCCTTTCTTTAGAAGATTTGAGCGAACAAATCA
AAAACCTTAAAAGTGCACAAGCTTTAGAAAAACTTAAAAGCAACTTCAATGAGCGTTTTAAAATTTGCCCCAAAGACAAA
GAAACTCTGTGGCTAGAAACGATCCAAAATTTAGTCGCTTCAGAATTTTTTGAATTAGAAGACGCTATTAATTTTGGGCA
AGAATTAGAAAACGCTAACCCTAATTACCAACAAAAAATCGCTAACGCTACCGGCTTAGCCCTTAAGAATAAAAAAGAAA
AAGGATAG

Upstream 100 bases:

>100_bases
GCTTACCAATTCAAAGGCAAGCGATACGATTGCGGGAGCGTGGAAGGCTATATTGAAGCGAGTAACGCTTATTATAAAAA
ACGCTTATAAATCTATCAAC

Downstream 100 bases:

>100_bases
AATTGGATTTTTTAGAGATTGTAGGACAAGTCCCTTTAAAAGGGGGGGTAGAAATTTCAGGGGCGAAAAACTCCGCGCTC
CCCATTTTAGCCGCCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MGNLTYYAYMYLILFVCLIPVLLMGLAWRLFRPPLKQNIPNKSLSLEDLSEQIKNLKSAQALEKLKSNFNERFKICPKDK
ETLWLETIQNLVASEFFELEDAINFGQELENANPNYQQKIANATGLALKNKKEKG

Sequences:

>Translated_135_residues
MGNLTYYAYMYLILFVCLIPVLLMGLAWRLFRPPLKQNIPNKSLSLEDLSEQIKNLKSAQALEKLKSNFNERFKICPKDK
ETLWLETIQNLVASEFFELEDAINFGQELENANPNYQQKIANATGLALKNKKEKG
>Mature_134_residues
GNLTYYAYMYLILFVCLIPVLLMGLAWRLFRPPLKQNIPNKSLSLEDLSEQIKNLKSAQALEKLKSNFNERFKICPKDKE
TLWLETIQNLVASEFFELEDAINFGQELENANPNYQQKIANATGLALKNKKEKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15572; Mature: 15441

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNLTYYAYMYLILFVCLIPVLLMGLAWRLFRPPLKQNIPNKSLSLEDLSEQIKNLKSAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHH
ALEKLKSNFNERFKICPKDKETLWLETIQNLVASEFFELEDAINFGQELENANPNYQQKI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ANATGLALKNKKEKG
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
GNLTYYAYMYLILFVCLIPVLLMGLAWRLFRPPLKQNIPNKSLSLEDLSEQIKNLKSAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHH
ALEKLKSNFNERFKICPKDKETLWLETIQNLVASEFFELEDAINFGQELENANPNYQQKI
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ANATGLALKNKKEKG
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA