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The map label for this gene is 108563025

Identifier: 108563025

GI number: 108563025

Start: 627119

End: 628117

Strand: Direct

Name: 108563025

Synonym: HPAG1_0600

Alternate gene names: NA

Gene position: 627119-628117 (Clockwise)

Preceding gene: 108563024

Following gene: 108563026

Centisome position: 39.28

GC content: 34.63

Gene sequence:

>999_bases
GTGATTGGTGTCTATATCATTTCGTTAAAAGAAAGTCAAAGGCGTTTGGATACTGAAAAACTCGTTTCAGAATCCAATGA
AAAATTTAAAGGCCGTTGTGTTTTTCAAATCTTTGACGCTATTAGCCCCAAACATCAAGATTTTGAAAAATTACTTCAAG
AGCTTTATGACGCTCAAAGTTTATTGCAATCTGATTGGTATCATTCTTATGTTGGTGCTGGTTTGACTTTGCCTGAATTA
GGGTGCTATTTAAGCCATTATCTTTTGTGGAAAGAATGCGTCAAAACAAACCAACCGGTCGTTATTTTAGAAGATGATGC
AATGCTAGAGTCTCATTTCATGCAAGCCCTAGAAGATTGCTTGAAAAGCCCTTTTGATTTTGTGAGACTCTATGGGTGCT
ATTGGTATTACCACGAGACAAAATTCCATGTTTTACCCAAAGAATTTGTACTTCCTCCCTTTGATTATCCTTTTAAAAAT
AACCCTATTTTAGAAAAATTTAAAAAATTTTTTGATGTTTCTAGATTTTTAAATCTTTCTACCCATAAAGTCATTCATTA
TATTCTCAAAAAAATACAAAAAAGCTATTACGCAACGCATGAAAAAGAAGCCTTTTTTTTAGAGCATTTTTACCTCACCA
GCGTGTATGTGGCTTCTACAGCCGGTTATTACTTAACCCCTAAGGGCGCTAAAACCTTTATAGAAGCCACAGAGCGTTTT
AAAATCATAGAGCCGGTGGATATGTTTATGGATAATTCTGCTTATCATGATGTGGCGAATCTGACTTATGTGCCTTGCCC
TGTTTCTTTAAGCGAGCATTCTTTAGACAGCACCATTCAAAAGCCCCAAAAAAAGAGCTCGAAATCTTACCCATTTCCGC
CTAAAAAATCAACTTTTAAGAATCTTTTCTACTACAGCATTAACGCTAAAAAACGTTTAAAAGCCTTTCAACAATACAGC
AAACAATATGATTATTTAAAAACCCCTAAAGAGGTTTAA

Upstream 100 bases:

>100_bases
GTTATCAATGGCGAAAGAAGCATTGAAGAAATCGTGCATGAAATGCAAGAGTATATCTTGTCTTTTGGGAATTAAAATGT
GCTCTCAAGGAGAATGAGCT

Downstream 100 bases:

>100_bases
AAAGAAATTTTATGGTAGAATGCCATATTTAGGAGTTCATTTGACACAAGTTTATATCATTTCTTTAAAAGAAAGTCAAA
GGCGTTTGGATACTGAAAAA

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Family; Glycosyl Transferase

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIGVYIISLKESQRRLDTEKLVSESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYDAQSLLQSDWYHSYVGAGLTLPEL
GCYLSHYLLWKECVKTNQPVVILEDDAMLESHFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVLPPFDYPFKN
NPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATERF
KIIEPVDMFMDNSAYHDVANLTYVPCPVSLSEHSLDSTIQKPQKKSSKSYPFPPKKSTFKNLFYYSINAKKRLKAFQQYS
KQYDYLKTPKEV

Sequences:

>Translated_332_residues
MIGVYIISLKESQRRLDTEKLVSESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYDAQSLLQSDWYHSYVGAGLTLPEL
GCYLSHYLLWKECVKTNQPVVILEDDAMLESHFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVLPPFDYPFKN
NPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATERF
KIIEPVDMFMDNSAYHDVANLTYVPCPVSLSEHSLDSTIQKPQKKSSKSYPFPPKKSTFKNLFYYSINAKKRLKAFQQYS
KQYDYLKTPKEV
>Mature_332_residues
MIGVYIISLKESQRRLDTEKLVSESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYDAQSLLQSDWYHSYVGAGLTLPEL
GCYLSHYLLWKECVKTNQPVVILEDDAMLESHFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVLPPFDYPFKN
NPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATERF
KIIEPVDMFMDNSAYHDVANLTYVPCPVSLSEHSLDSTIQKPQKKSSKSYPFPPKKSTFKNLFYYSINAKKRLKAFQQYS
KQYDYLKTPKEV

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39196; Mature: 39196

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVYIISLKESQRRLDTEKLVSESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYDAQS
CEEEEEEEECHHHHHCCHHHHHHCCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLQSDWYHSYVGAGLTLPELGCYLSHYLLWKECVKTNQPVVILEDDAMLESHFMQALEDC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH
LKSPFDFVRLYGCYWYYHETKFHVLPKEFVLPPFDYPFKNNPILEKFKKFFDVSRFLNLS
HHCHHHHHHHHHHHEEEECCEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
THKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATERF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH
KIIEPVDMFMDNSAYHDVANLTYVPCPVSLSEHSLDSTIQKPQKKSSKSYPFPPKKSTFK
HHCCHHHHHHCCCHHHHHCCCEEECCCCCCCHHHHHHHHHCHHHHCCCCCCCCCCHHHHH
NLFYYSINAKKRLKAFQQYSKQYDYLKTPKEV
HEEEEECCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIGVYIISLKESQRRLDTEKLVSESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYDAQS
CEEEEEEEECHHHHHCCHHHHHHCCCCHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLQSDWYHSYVGAGLTLPELGCYLSHYLLWKECVKTNQPVVILEDDAMLESHFMQALEDC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH
LKSPFDFVRLYGCYWYYHETKFHVLPKEFVLPPFDYPFKNNPILEKFKKFFDVSRFLNLS
HHCHHHHHHHHHHHEEEECCEEEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH
THKVIHYILKKIQKSYYATHEKEAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATERF
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH
KIIEPVDMFMDNSAYHDVANLTYVPCPVSLSEHSLDSTIQKPQKKSSKSYPFPPKKSTFK
HHCCHHHHHHCCCHHHHHCCCEEECCCCCCCHHHHHHHHHCHHHHCCCCCCCCCCHHHHH
NLFYYSINAKKRLKAFQQYSKQYDYLKTPKEV
HEEEEECCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA