| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is adk [H]
Identifier: 108563024
GI number: 108563024
Start: 626518
End: 627093
Strand: Direct
Name: adk [H]
Synonym: HPAG1_0599
Alternate gene names: 108563024
Gene position: 626518-627093 (Clockwise)
Preceding gene: 108563023
Following gene: 108563025
Centisome position: 39.25
GC content: 39.24
Gene sequence:
>576_bases ATGAAACAACTATTTTTGATTATTGGAGCCCCAGGGAGTGGTAAAACCACTGATGCAGAGCTTATCTCTAAGAATAACAG CGAAACAATCGCTCATTTTTCTACTGGGGATTTATTAAGGGCTGAGAGCGCTAAAAAGACCGAGCGAGGCTTATTGATTG AGAAATTCACTTCTCAAGGTGAATTAGTGCCTTTAGAGATTGTGGTAGAAACGATCCTTTCAGCGATTAAAAGTTCTAGC AAAAGAATCATTTTAATTGATGGCTATCCTAGGAGCGTGGAACAAATGCAGGCTTTGGATAAGGAATTGAACGCTCAAAA CGAAGTGATCTTAAAAAGCGTGATTGAAGTAGAAGTGAGTGAAAACACCGCTAAAGAAAGGGTTTTAGGGCGCTCTAGGG GGGCTGATGACAATGAAAAGGTATTTCATAACCGCATGCGGGTGTTTTTAGATCCCTTAGCTGAAATCCAAAATTTCTAC AAGGCTAAGCATTTGCATAAAGTTATCAATGGCGAAAGAAGCATTGAAGAAATCGTGCATGAAATGCAAGAGTATATCTT GTCTTTTGGGAATTAA
Upstream 100 bases:
>100_bases AAAGCTTCATGCTTATTGACTGATGCGCCTAGTCCTATTAATGAAGAACAATTAAGAGAATTACACATTCGCTTGAGAAA ATAATTTAAAAGGATATGAT
Downstream 100 bases:
>100_bases AATGTGCTCTCAAGGAGAATGAGCTGTGATTGGTGTCTATATCATTTCGTTAAAAGAAAGTCAAAGGCGTTTGGATACTG AAAAACTCGTTTCAGAATCC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKQLFLIIGAPGSGKTTDAELISKNNSETIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSS KRIILIDGYPRSVEQMQALDKELNAQNEVILKSVIEVEVSENTAKERVLGRSRGADDNEKVFHNRMRVFLDPLAEIQNFY KAKHLHKVINGERSIEEIVHEMQEYILSFGN
Sequences:
>Translated_191_residues MKQLFLIIGAPGSGKTTDAELISKNNSETIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSS KRIILIDGYPRSVEQMQALDKELNAQNEVILKSVIEVEVSENTAKERVLGRSRGADDNEKVFHNRMRVFLDPLAEIQNFY KAKHLHKVINGERSIEEIVHEMQEYILSFGN >Mature_191_residues MKQLFLIIGAPGSGKTTDAELISKNNSETIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSS KRIILIDGYPRSVEQMQALDKELNAQNEVILKSVIEVEVSENTAKERVLGRSRGADDNEKVFHNRMRVFLDPLAEIQNFY KAKHLHKVINGERSIEEIVHEMQEYILSFGN
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4502011, Length=189, Percent_Identity=30.1587301587302, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI28144899, Length=187, Percent_Identity=35.2941176470588, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI28144897, Length=187, Percent_Identity=35.2941176470588, Blast_Score=93, Evalue=1e-19, Organism=Homo sapiens, GI7706497, Length=192, Percent_Identity=30.2083333333333, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI4502013, Length=200, Percent_Identity=27.5, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI7524346, Length=200, Percent_Identity=27.5, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI19923437, Length=126, Percent_Identity=34.1269841269841, Blast_Score=77, Evalue=9e-15, Organism=Escherichia coli, GI1786680, Length=140, Percent_Identity=30.7142857142857, Blast_Score=62, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17567503, Length=182, Percent_Identity=36.8131868131868, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17533833, Length=187, Percent_Identity=28.3422459893048, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17550688, Length=186, Percent_Identity=29.5698924731183, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17552384, Length=215, Percent_Identity=24.6511627906977, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322828, Length=190, Percent_Identity=28.9473684210526, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6320432, Length=129, Percent_Identity=34.8837209302326, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321018, Length=202, Percent_Identity=27.2277227722772, Blast_Score=72, Evalue=5e-14, Organism=Drosophila melanogaster, GI221459597, Length=193, Percent_Identity=27.979274611399, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356893, Length=193, Percent_Identity=27.979274611399, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI17737899, Length=207, Percent_Identity=30.4347826086957, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24645822, Length=207, Percent_Identity=30.4347826086957, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI17647141, Length=191, Percent_Identity=31.9371727748691, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24663208, Length=191, Percent_Identity=31.9371727748691, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI22026816, Length=127, Percent_Identity=36.2204724409449, Blast_Score=77, Evalue=6e-15,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000850 [H]
Pfam domain/function: PF00406 ADK [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 21464; Mature: 21464
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLFLIIGAPGSGKTTDAELISKNNSETIAHFSTGDLLRAESAKKTERGLLIEKFTSQG CCEEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCHHHHHHCCCC ELVPLEIVVETILSAIKSSSKRIILIDGYPRSVEQMQALDKELNAQNEVILKSVIEVEVS CEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC ENTAKERVLGRSRGADDNEKVFHNRMRVFLDPLAEIQNFYKAKHLHKVINGERSIEEIVH CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EMQEYILSFGN HHHHHHHHCCC >Mature Secondary Structure MKQLFLIIGAPGSGKTTDAELISKNNSETIAHFSTGDLLRAESAKKTERGLLIEKFTSQG CCEEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCHHHHHHCCCC ELVPLEIVVETILSAIKSSSKRIILIDGYPRSVEQMQALDKELNAQNEVILKSVIEVEVS CEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC ENTAKERVLGRSRGADDNEKVFHNRMRVFLDPLAEIQNFYKAKHLHKVINGERSIEEIVH CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EMQEYILSFGN HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA