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The map label for this gene is 108563001

Identifier: 108563001

GI number: 108563001

Start: 592938

End: 593516

Strand: Direct

Name: 108563001

Synonym: HPAG1_0576

Alternate gene names: NA

Gene position: 592938-593516 (Clockwise)

Preceding gene: 108563000

Following gene: 108563007

Centisome position: 37.14

GC content: 40.41

Gene sequence:

>579_bases
GTGTTAGAAAAATCTTTTTTAAAAAGCAAGCAATTATTTTTATGCGGATTGGGTGTTTTGATGCTGCAAGCTTGCACTTG
CCCAAACACTTCGCAAAGGAATTCTTTCTTGCAAGATGTGCCTTATTGGATGTTGCAAAATCGCAGTGAGTATCTCACGC
AAGGGGTGGATAGCTCGCACATTGTGGATGGTAAGACAACTGAAGAGATAGAAAAAATCGCTACCAAAAGAGCGACAATA
AGAGTGGCGCAAAATATCGTGCACAAACTCAAAGAGGCTTACCTTTCCAAATCCAATCGCATCAAGCAAAAGATCACTAA
TGAAATGTTTATCCAAATGACACAGCCCATTTATGACAGCTTGATGAATGTGGATCGTTTAGGGATTTATATCAATCCTA
ACAATGAGGAAGTGTTTGCGTTAGTGCGCGCGCGTGGTTTTGATAAGGACGCTTTGAGCGAAGGGTTGCATAAAATGTCC
TTAGACAATCAAGCGGTGAGTATCCTTGTGGCTAAAGTGGAAGAAATCTTTAAAGATTCTGTCAATTACGGAGACATTAA
AGTCCCTATAGCCATGTAG

Upstream 100 bases:

>100_bases
AGTTTCAATCATTTTATTTTTTTTATTTTTTACCTAATTATTGTTTAAAATCTTAAAGATTTATGTTACACTCTGTAAAA
TTAAAATCAAAGGGGATAGC

Downstream 100 bases:

>100_bases
GCTTAGAACAACAAGCGTTCCTCGCTATCGTCTGTTCTTTTGGGGGTGGGGGTGATGGAATTAGGGGTTGAATAGTAGGG
GATTTTATCCACGATTTCTT

Product: tumor necrosis factor alpha-inducing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLEKSFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSEYLTQGVDSSHIVDGKTTEEIEKIATKRATI
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIYDSLMNVDRLGIYINPNNEEVFALVRARGFDKDALSEGLHKMS
LDNQAVSILVAKVEEIFKDSVNYGDIKVPIAM

Sequences:

>Translated_192_residues
MLEKSFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSEYLTQGVDSSHIVDGKTTEEIEKIATKRATI
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIYDSLMNVDRLGIYINPNNEEVFALVRARGFDKDALSEGLHKMS
LDNQAVSILVAKVEEIFKDSVNYGDIKVPIAM
>Mature_192_residues
MLEKSFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSEYLTQGVDSSHIVDGKTTEEIEKIATKRATI
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIYDSLMNVDRLGIYINPNNEEVFALVRARGFDKDALSEGLHKMS
LDNQAVSILVAKVEEIFKDSVNYGDIKVPIAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21852; Mature: 21852

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKSFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSEYLTQGVDSSH
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
IVDGKTTEEIEKIATKRATIRVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIYDS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMNVDRLGIYINPNNEEVFALVRARGFDKDALSEGLHKMSLDNQAVSILVAKVEEIFKDS
HHCHHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
VNYGDIKVPIAM
CCCCCEEEEECC
>Mature Secondary Structure
MLEKSFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSEYLTQGVDSSH
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
IVDGKTTEEIEKIATKRATIRVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIYDS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMNVDRLGIYINPNNEEVFALVRARGFDKDALSEGLHKMSLDNQAVSILVAKVEEIFKDS
HHCHHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
VNYGDIKVPIAM
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA