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The map label for this gene is flaA [H]

Identifier: 108563007

GI number: 108563007

Start: 599960

End: 601492

Strand: Direct

Name: flaA [H]

Synonym: HPAG1_0582

Alternate gene names: 108563007

Gene position: 599960-601492 (Clockwise)

Preceding gene: 108563001

Following gene: 108563008

Centisome position: 37.58

GC content: 44.55

Gene sequence:

>1533_bases
ATGGCTTTTCAGGTCAATACAAATATCAATGCGATGAATGCGCATGTGCAATCCGCACTCACTCAAAATGCGCTTAAAAC
TTCATTGGAGAGATTGAGTTCAGGTTTAAGGATTAATAAAGCGGCTGATGACGCATCAGGCATGACGGTGGCGGATTCTT
TGCATTCACAAGCGAGCAGTTTGGGTCAAGCGATTGCCAACACGAATGACGGCATGGGGATTATCCAAGTTGCGGATAAG
GCTATGGATGAGCAGTTGAAAATCTTAGACACCGTTAAGGTTAAAGCGACTCAAGCGGCTCAAGACGGGCAAACTACAGA
ATCTCGTAAAGCGATTCAATCTGACATCGTTCGTTTGATTCAAGGTTTAGACAATATCGGTAACACGACGACTTATAACG
GGCAAGCGTTATTGTCTGGTCAATTCACCAACAAGGAATTCCAAGTAGGGGCTTATTCTAACCAAAGTATTAAGGCCTCT
ATCGGCTCTACCACTTCCGATAAAATCGGTCAGGTTCGTATCGCTACAGGCGCGTTAATCACGGCTTCTGGGGATATTAG
CTTGACTTTTAAACAAGTGGATGGCGTGAATGATGTAACTTTAGAGAGCGTAAAAGTCTCTAGTTCAGCAGGCACAGGGA
TTGGCGTGTTAGCAGAAGTGATCAACAAGAACTCTAACCGAACAGGGGTTAAAGCTTATGCGAGCGTTATCACCACGAGC
GATGTGGCGGTCCAGTCAGGAAGTTTGAGTAATTTAACCTTAAATGGGATCCATTTGGGGAATATCGCAGATATTAAGAA
AAATGACTCAGACGGAAGGTTAGTCGCAGCGATCAATGCGGTTACTTCAGAAACCGGCGTGGAAGCTTATACGGATCAAA
AAGGGCGCTTGAATTTGCGCAGTATAGATGGTCGTGGGATTGAAATCAAAACCGATAGCGTCAGTAATGGGCCTAGTGCT
TTAACGATGGTCAATGGCGGCCAGGATTTAACAAAAGGTTCTACTAACTATGGGAGGCTTTCTCTCACACGCTTAGACGC
TAAAAGCATCAATGTCGTTTCGGCTTCTGATTCGCAACATTTAGGTTTCACAGCGATTGGTTTTGGGGAATCTCAAGTGG
CAGAAACCACGGTGAATTTGCGCGATGTTACTGGGAATTTTAACGCTAATGTCAAATCAGCCAGTGGCGCGAACTATAAC
GCCGTGATCGCTAGCGGTAACCAAAGCTTGGGATCTGGGGTTACAACCTTGAGAGGCGCGATGGTGGTGATTGATATTGC
CGAGTCTGCGATGAAAATGTTGGATAAAGTCCGCTCTGATTTAGGTTCTGTGCAAAATCAAATGATTAGCACCGTGAATA
ACATCAGCATCACTCAAGTGAATGTTAAAGCGGCTGAGTCTCAAATCAGGGATGTGGATTTTGCTGAAGAGAGCGCGAAT
TTCAATAAAAACAACATTTTGGCGCAATCAGGCAGCTATGCGATGAGTCAAGCCAATACCGTTCAACAAAATATCTTAAG
GCTTTTAACTTAG

Upstream 100 bases:

>100_bases
TTTTAAAATAAAGCCCTTTAAAATTTCAAACTTTAACCGATAATAGTTCCAACCAAAAGCAAGGATGCCTTTGGGTTTTT
TATAACAAGGAGTTACAACA

Downstream 100 bases:

>100_bases
TTTTAAGGAAGGTGTTTGTATGGGGCTAACGCTTTAAGCGTTGGCTTTTCGCTTTCATTTTTACTTCTTTTTTAATAAAA
TACTCTTTTTGATTCCTTTT

Product: flagellin A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MAFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLHSQASSLGQAIANTNDGMGIIQVADK
AMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKAS
IGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTS
DVAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDGRGIEIKTDSVSNGPSA
LTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGANYN
AVIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN
FNKNNILAQSGSYAMSQANTVQQNILRLLT

Sequences:

>Translated_510_residues
MAFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLHSQASSLGQAIANTNDGMGIIQVADK
AMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKAS
IGSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTS
DVAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDGRGIEIKTDSVSNGPSA
LTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGANYN
AVIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN
FNKNNILAQSGSYAMSQANTVQQNILRLLT
>Mature_509_residues
AFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLHSQASSLGQAIANTNDGMGIIQVADKA
MDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASI
GSTTSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTSD
VAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLRSIDGRGIEIKTDSVSNGPSAL
TMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQHLGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNA
VIASGNQSLGSGVTTLRGAMVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANF
NKNNILAQSGSYAMSQANTVQQNILRLLT

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Important for motility and virulence [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=136, Percent_Identity=37.5, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 53266; Mature: 53135

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLHSQASS
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHH
LGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLI
HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHH
QGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALI
HHHHHCCCCEEECCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECEEE
TASGDISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTS
EECCCEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC
DVAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLR
CCEEECCCCCEEEECCEEECCEECCCCCCCCCEEEEEEEHHHCCCCCEEECCCCCCEEEE
SIDGRGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQH
EECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC
LGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGA
CCEEEECCCCHHHHHEEEEEEEECCCCCCCEECCCCCCEEEEEECCCCCCCCCHHHHCCE
MVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCCHHHCCC
FNKNNILAQSGSYAMSQANTVQQNILRLLT
CCCCCEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFQVNTNINAMNAHVQSALTQNALKTSLERLSSGLRINKAADDASGMTVADSLHSQASS
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHH
LGQAIANTNDGMGIIQVADKAMDEQLKILDTVKVKATQAAQDGQTTESRKAIQSDIVRLI
HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHEEEEEHHCCCCCCCHHHHHHHHHHHHHHH
QGLDNIGNTTTYNGQALLSGQFTNKEFQVGAYSNQSIKASIGSTTSDKIGQVRIATGALI
HHHHHCCCCEEECCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEECEEE
TASGDISLTFKQVDGVNDVTLESVKVSSSAGTGIGVLAEVINKNSNRTGVKAYASVITTS
EECCCEEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCC
DVAVQSGSLSNLTLNGIHLGNIADIKKNDSDGRLVAAINAVTSETGVEAYTDQKGRLNLR
CCEEECCCCCEEEECCEEECCEECCCCCCCCCEEEEEEEHHHCCCCCEEECCCCCCEEEE
SIDGRGIEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLSLTRLDAKSINVVSASDSQH
EECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCC
LGFTAIGFGESQVAETTVNLRDVTGNFNANVKSASGANYNAVIASGNQSLGSGVTTLRGA
CCEEEECCCCHHHHHEEEEEEEECCCCCCCEECCCCCCEEEEEECCCCCCCCCHHHHCCE
MVVIDIAESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESAN
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCCHHHCCC
FNKNNILAQSGSYAMSQANTVQQNILRLLT
CCCCCEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]